RNA–Protein interactions for RNA: ENST00000453297.5

MCF2L-219, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 1,819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-219ENST00000453297 EREGO14944 169 aa17.18■□□□□ 0.34
MCF2L-219ENST00000453297 ATP6V0E2Q8NHE4 81 aa17.18■□□□□ 0.34
MCF2L-219ENST00000453297 TRBV6-8A0A0A6YYG3 113 aa17.17■□□□□ 0.34
MCF2L-219ENST00000453297 A0A0J9YXV3 536 aa17.17■□□□□ 0.34
MCF2L-219ENST00000453297 TMEM97Q5BJF2 176 aa17.17■□□□□ 0.34
MCF2L-219ENST00000453297 KPRPQ5T749 579 aaPredicted RBP17.17■□□□□ 0.34
MCF2L-219ENST00000453297 CHAC1Q9BUX1 264 aa17.17■□□□□ 0.34
MCF2L-219ENST00000453297 CSDC2Q9Y534 153 aaKnown RBP17.17■□□□□ 0.34
MCF2L-219ENST00000453297 A0A0J9YY99 117 aa17.16■□□□□ 0.34
MCF2L-219ENST00000453297 F5H768 121 aa17.16■□□□□ 0.34
MCF2L-219ENST00000453297 K7EIL1 84 aa17.16■□□□□ 0.34
MCF2L-219ENST00000453297 UBE2L6O14933 153 aa17.16■□□□□ 0.34
MCF2L-219ENST00000453297 SMAGPQ0VAQ4 97 aa17.16■□□□□ 0.34
MCF2L-219ENST00000453297 C2orf91Q6ZV80 131 aa17.16■□□□□ 0.34
MCF2L-219ENST00000453297 TTTY13Q9BZ97 58 aa17.16■□□□□ 0.34
MCF2L-219ENST00000453297 H7C423 109 aa17.15■□□□□ 0.34
MCF2L-219ENST00000453297 TMEM170BQ5T4T1 132 aa17.15■□□□□ 0.34
MCF2L-219ENST00000453297 C11orf68Q9H3H3 251 aaKnown RBP17.15■□□□□ 0.34
MCF2L-219ENST00000453297 E9PLD3 99 aa17.14■□□□□ 0.34
MCF2L-219ENST00000453297 C12orf74Q32Q52 190 aa17.14■□□□□ 0.34
MCF2L-219ENST00000453297 C2orf88Q9BSF0 95 aa17.14■□□□□ 0.33
MCF2L-219ENST00000453297 TRAV26-1A0A087WT03 109 aa17.13■□□□□ 0.33
MCF2L-219ENST00000453297 HTN3P15516 51 aa17.13■□□□□ 0.33
MCF2L-219ENST00000453297 AMMECR1LQ6DCA0 310 aa17.12■□□□□ 0.33
MCF2L-219ENST00000453297 NOTCH1P46531 2555 aa17.12■□□□□ 0.33
MCF2L-219ENST00000453297 TRAV8-6A0A0B4J262 113 aa17.12■□□□□ 0.33
MCF2L-219ENST00000453297 SIVA1O15304 175 aa17.11■□□□□ 0.33
MCF2L-219ENST00000453297 ZNF22P17026 224 aaPredicted RBP17.11■□□□□ 0.33
MCF2L-219ENST00000453297 HERVK_113P61574 105 aa17.11■□□□□ 0.33
MCF2L-219ENST00000453297 MAPKAPK5-AS1Q8N8E1 139 aa17.11■□□□□ 0.33
MCF2L-219ENST00000453297 OR5A1Q8NGJ0 315 aa17.11■□□□□ 0.33
MCF2L-219ENST00000453297 CDC42SE2Q9NRR3 84 aa17.11■□□□□ 0.33
MCF2L-219ENST00000453297 A0A096LPF7 62 aa17.1■□□□□ 0.33
MCF2L-219ENST00000453297 GAGE6Q13070 117 aa17.1■□□□□ 0.33
MCF2L-219ENST00000453297 UBE2D1P51668 147 aa17.1■□□□□ 0.33
MCF2L-219ENST00000453297 TMEM101Q96IK0 257 aa17.1■□□□□ 0.33
MCF2L-219ENST00000453297 CHCHD5Q9BSY4 110 aa17.1■□□□□ 0.33
MCF2L-219ENST00000453297 TINCRA0A1B0GVN0 87 aa17.09■□□□□ 0.33
MCF2L-219ENST00000453297 DEFB121Q5J5C9 76 aa17.09■□□□□ 0.33
MCF2L-219ENST00000453297 TMEM223A0PJW6 202 aa17.08■□□□□ 0.33
MCF2L-219ENST00000453297 ZNF25P17030 456 aaPredicted RBP17.08■□□□□ 0.33
MCF2L-219ENST00000453297 HINT1P49773 126 aaPredicted RBP17.08■□□□□ 0.33
MCF2L-219ENST00000453297 BATFQ16520 125 aa17.08■□□□□ 0.33
MCF2L-219ENST00000453297 LBHQ53QV2 105 aaPredicted RBP17.08■□□□□ 0.33
MCF2L-219ENST00000453297 A0A0J9YWU9 116 aa17.07■□□□□ 0.32
MCF2L-219ENST00000453297 MPV17L2Q567V2 206 aa17.06■□□□□ 0.32
MCF2L-219ENST00000453297 SPATA25Q9BR10 227 aa17.06■□□□□ 0.32
MCF2L-219ENST00000453297 TM2D3Q9BRN9 247 aa17.05■□□□□ 0.32
MCF2L-219ENST00000453297 NBEAL1Q6ZS30 2694 aa17.05■□□□□ 0.32
MCF2L-219ENST00000453297 MRPL23Q16540 153 aaKnown RBP17.05■□□□□ 0.32
MCF2L-219ENST00000453297 HIGD1BQ9P298 99 aa17.04■□□□□ 0.32
MCF2L-219ENST00000453297 MYMXA0A1B0GTQ4 84 aa17.03■□□□□ 0.32
MCF2L-219ENST00000453297 TIRAPP58753 221 aa17.03■□□□□ 0.32
MCF2L-219ENST00000453297 FAM19A3Q7Z5A8 133 aa17.03■□□□□ 0.32
MCF2L-219ENST00000453297 ICOSQ9Y6W8 199 aa17.03■□□□□ 0.32
MCF2L-219ENST00000453297 Q6ZTC4 211 aa17.03■□□□□ 0.32
MCF2L-219ENST00000453297 MRAPQ8TCY5 172 aa17.03■□□□□ 0.32
MCF2L-219ENST00000453297 GEMIN7Q9H840 131 aaKnown RBP17.03■□□□□ 0.32
MCF2L-219ENST00000453297 IGLV4-60A0A075B6I1 120 aa17.02■□□□□ 0.31
MCF2L-219ENST00000453297 LEPROTO15243 131 aa17.01■□□□□ 0.31
MCF2L-219ENST00000453297 TSPEAR-AS2P59090 65 aa17.01■□□□□ 0.31
MCF2L-219ENST00000453297 LINC00242Q5T6M2 205 aa17.01■□□□□ 0.31
MCF2L-219ENST00000453297 TRAV13-1A0A0B4J241 112 aa17■□□□□ 0.31
MCF2L-219ENST00000453297 SH2D6Q7Z4S9 175 aa17■□□□□ 0.31
MCF2L-219ENST00000453297 TENM3Q9P273 2699 aa17■□□□□ 0.31
MCF2L-219ENST00000453297 COX6A2Q02221 97 aa17■□□□□ 0.31
MCF2L-219ENST00000453297 BVES-AS1Q5T3Y7 98 aa17■□□□□ 0.31
MCF2L-219ENST00000453297 LINC00469Q8N7U9 141 aa17■□□□□ 0.31
MCF2L-219ENST00000453297 IGLV5-45A0A087WSX0 123 aa16.99■□□□□ 0.31
MCF2L-219ENST00000453297 ZNF815PA8K554 130 aa16.99■□□□□ 0.31
MCF2L-219ENST00000453297 J3QQQ9 107 aa16.99■□□□□ 0.31
MCF2L-219ENST00000453297 C11orf45Q8TAV5 145 aa16.99■□□□□ 0.31
MCF2L-219ENST00000453297 MGAM2Q2M2H8 2515 aa16.99■□□□□ 0.31
MCF2L-219ENST00000453297 IGHV3-64A0A075B6Q5 118 aa16.98■□□□□ 0.31
MCF2L-219ENST00000453297 NANOS2P60321 138 aaKnown RBP16.98■□□□□ 0.31
MCF2L-219ENST00000453297 HERVK_113P63121 156 aa16.98■□□□□ 0.31
MCF2L-219ENST00000453297 SEC11AP67812 179 aa16.98■□□□□ 0.31
MCF2L-219ENST00000453297 TMEM262E9PQX1 116 aa16.98■□□□□ 0.31
MCF2L-219ENST00000453297 HSD52Q0P140 79 aa16.98■□□□□ 0.31
MCF2L-219ENST00000453297 CDKN2A-AS1Q9UH64 79 aa16.98■□□□□ 0.31
MCF2L-219ENST00000453297 A0A1B0GUV1 79 aa16.97■□□□□ 0.31
MCF2L-219ENST00000453297 H3BNG1 76 aa16.97■□□□□ 0.31
MCF2L-219ENST00000453297 PLEKHB2Q96CS7 222 aa16.96■□□□□ 0.31
MCF2L-219ENST00000453297 LGALS3P17931 250 aaKnown RBP16.96■□□□□ 0.3
MCF2L-219ENST00000453297 RBX1P62877 108 aa16.96■□□□□ 0.3
MCF2L-219ENST00000453297 COL5A1-AS1Q5SY13 56 aa16.96■□□□□ 0.3
MCF2L-219ENST00000453297 LURAP1LQ8IV03 231 aa16.96■□□□□ 0.3
MCF2L-219ENST00000453297 TRAV8-3A0A0A6YYJ7 113 aa16.95■□□□□ 0.3
MCF2L-219ENST00000453297 IGHV3-30-3P0DP02 117 aa16.95■□□□□ 0.3
MCF2L-219ENST00000453297 IGHV1-58A0A0C4DH39 117 aa16.94■□□□□ 0.3
MCF2L-219ENST00000453297 H3BRM9 83 aa16.94■□□□□ 0.3
MCF2L-219ENST00000453297 SPINK8P0C7L1 97 aa16.94■□□□□ 0.3
MCF2L-219ENST00000453297 LELP1Q5T871 98 aa16.93■□□□□ 0.3
MCF2L-219ENST00000453297 IGKV3OR2-268A0A0C4DH90 116 aa16.91■□□□□ 0.3
MCF2L-219ENST00000453297 DEFB131BA0A096LNP1 70 aa16.91■□□□□ 0.3
MCF2L-219ENST00000453297 A0A1B0GV90 55 aa16.9■□□□□ 0.3
MCF2L-219ENST00000453297 LYPD5Q6UWN5 251 aa16.9■□□□□ 0.3
MCF2L-219ENST00000453297 SCGB1D4Q6XE38 83 aa16.9■□□□□ 0.3
MCF2L-219ENST00000453297 ORAOV1Q8WV07 137 aa16.89■□□□□ 0.29
MCF2L-219ENST00000453297 TAL2Q16559 108 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms