RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 PYGO1Q9Y3Y4 419 aa8.4□□□□□ -1.06
VTA1-203ENST00000452973 TMEM223A0PJW6 202 aa8.4□□□□□ -1.07
VTA1-203ENST00000452973 A8MZ25 164 aa8.39□□□□□ -1.07
VTA1-203ENST00000452973 AMELXQ99217 191 aa8.39□□□□□ -1.07
VTA1-203ENST00000452973 DEFB4AO15263 64 aa8.39□□□□□ -1.07
VTA1-203ENST00000452973 SAMD5Q5TGI4 173 aa8.39□□□□□ -1.07
VTA1-203ENST00000452973 SPANXA1Q9NS26 97 aa8.39□□□□□ -1.07
VTA1-203ENST00000452973 C9orf66Q5T8R8 295 aa8.38□□□□□ -1.07
VTA1-203ENST00000452973 NTM-AS1Q6ZSK4 140 aa8.38□□□□□ -1.07
VTA1-203ENST00000452973 C12orf74Q32Q52 190 aa8.38□□□□□ -1.07
VTA1-203ENST00000452973 GEMIN7Q9H840 131 aaKnown RBP8.38□□□□□ -1.07
VTA1-203ENST00000452973 A0A0J9YY99 117 aa8.38□□□□□ -1.07
VTA1-203ENST00000452973 SPINK8P0C7L1 97 aa8.38□□□□□ -1.07
VTA1-203ENST00000452973 TAL2Q16559 108 aa8.38□□□□□ -1.07
VTA1-203ENST00000452973 TIMM21Q9BVV7 248 aa8.38□□□□□ -1.07
VTA1-203ENST00000452973 A0A1W2PPM0 123 aa8.37□□□□□ -1.07
VTA1-203ENST00000452973 TMEM238C9JI98 176 aa8.37□□□□□ -1.07
VTA1-203ENST00000452973 SFTA2Q6UW10 78 aa8.37□□□□□ -1.07
VTA1-203ENST00000452973 TRAV13-1A0A0B4J241 112 aa8.37□□□□□ -1.07
VTA1-203ENST00000452973 TRBV10-1A0A0K0K1A3 114 aa8.37□□□□□ -1.07
VTA1-203ENST00000452973 APOMO95445 188 aa8.37□□□□□ -1.07
VTA1-203ENST00000452973 DEFB135Q30KP9 77 aa8.37□□□□□ -1.07
VTA1-203ENST00000452973 SPCS1Q9Y6A9 102 aa8.37□□□□□ -1.07
VTA1-203ENST00000452973 LEPROTO15243 131 aa8.36□□□□□ -1.07
VTA1-203ENST00000452973 IGHV3-30-3P0DP02 117 aa8.36□□□□□ -1.07
VTA1-203ENST00000452973 FABP2P12104 132 aa8.36□□□□□ -1.07
VTA1-203ENST00000452973 UBE2D3P61077 147 aa8.36□□□□□ -1.07
VTA1-203ENST00000452973 UBE2D2P62837 147 aa8.36□□□□□ -1.07
VTA1-203ENST00000452973 MRPS36P82909 103 aaKnown RBP8.36□□□□□ -1.07
VTA1-203ENST00000452973 DAZ4Q86SG3 579 aaKnown RBP8.36□□□□□ -1.07
VTA1-203ENST00000452973 DAZ3Q9NR90 486 aaKnown RBP8.36□□□□□ -1.07
VTA1-203ENST00000452973 IGKV3OR2-268A0A0C4DH90 116 aa8.36□□□□□ -1.07
VTA1-203ENST00000452973 INSL3P51460 131 aa8.36□□□□□ -1.07
VTA1-203ENST00000452973 GTF2H5Q6ZYL4 71 aa8.36□□□□□ -1.07
VTA1-203ENST00000452973 UBE2L6O14933 153 aa8.35□□□□□ -1.07
VTA1-203ENST00000452973 OVOL2Q9BRP0 275 aa8.35□□□□□ -1.07
VTA1-203ENST00000452973 CITED1Q99966 193 aa8.35□□□□□ -1.07
VTA1-203ENST00000452973 CDKN2A-AS1Q9UH64 79 aa8.35□□□□□ -1.07
VTA1-203ENST00000452973 STAB1Q9NY15 2570 aa8.35□□□□□ -1.07
VTA1-203ENST00000452973 FHL2Q14192 279 aa8.34□□□□□ -1.07
VTA1-203ENST00000452973 IGLL5B9A064 214 aa8.34□□□□□ -1.07
VTA1-203ENST00000452973 VPS25Q9BRG1 176 aa8.34□□□□□ -1.07
VTA1-203ENST00000452973 TINCRA0A1B0GVN0 87 aa8.34□□□□□ -1.07
VTA1-203ENST00000452973 COX6A2Q02221 97 aa8.34□□□□□ -1.07
VTA1-203ENST00000452973 A0A096LPF7 62 aa8.33□□□□□ -1.08
VTA1-203ENST00000452973 K7EP34 96 aa8.33□□□□□ -1.08
VTA1-203ENST00000452973 UBE2D1P51668 147 aa8.33□□□□□ -1.08
VTA1-203ENST00000452973 TRBV6-4A0A1B0GX49 114 aa8.33□□□□□ -1.08
VTA1-203ENST00000452973 CRYBA4P53673 196 aa8.33□□□□□ -1.08
VTA1-203ENST00000452973 GAGE6Q13070 117 aa8.33□□□□□ -1.08
VTA1-203ENST00000452973 C10orf126Q8N4M7 172 aa8.33□□□□□ -1.08
VTA1-203ENST00000452973 OR5A1Q8NGJ0 315 aa8.33□□□□□ -1.08
VTA1-203ENST00000452973 X6R8D5 127 aa8.33□□□□□ -1.08
VTA1-203ENST00000452973 A6NJY4 79 aa8.32□□□□□ -1.08
VTA1-203ENST00000452973 PRSS2P07478 247 aa8.32□□□□□ -1.08
VTA1-203ENST00000452973 TMEM243Q9BU79 118 aa8.32□□□□□ -1.08
VTA1-203ENST00000452973 PGPEP1Q9NXJ5 209 aa8.32□□□□□ -1.08
VTA1-203ENST00000452973 NPC2P61916 151 aa8.32□□□□□ -1.08
VTA1-203ENST00000452973 MAST4O15021 2626 aa8.32□□□□□ -1.08
VTA1-203ENST00000452973 IGHV1-58A0A0C4DH39 117 aa8.32□□□□□ -1.08
VTA1-203ENST00000452973 FAM222AQ5U5X8 452 aa8.32□□□□□ -1.08
VTA1-203ENST00000452973 CHCHD5Q9BSY4 110 aa8.32□□□□□ -1.08
VTA1-203ENST00000452973 NDUFA12Q9UI09 145 aa8.32□□□□□ -1.08
VTA1-203ENST00000452973 IGHV3-30P01768 117 aa8.31□□□□□ -1.08
VTA1-203ENST00000452973 IGHV3-30-5P0DP03 117 aa8.31□□□□□ -1.08
VTA1-203ENST00000452973 VSIG2Q96IQ7 327 aa8.31□□□□□ -1.08
VTA1-203ENST00000452973 A0A0J9YXY3 114 aa8.3□□□□□ -1.08
VTA1-203ENST00000452973 LINC00242Q5T6M2 205 aa8.3□□□□□ -1.08
VTA1-203ENST00000452973 ZNF625Q96I27 306 aaPredicted RBP8.3□□□□□ -1.08
VTA1-203ENST00000452973 TMEM101Q96IK0 257 aa8.3□□□□□ -1.08
VTA1-203ENST00000452973 A0A0U1RRA0 63 aa8.3□□□□□ -1.08
VTA1-203ENST00000452973 GYPEP15421 78 aa8.3□□□□□ -1.08
VTA1-203ENST00000452973 MTURNQ8N3F0 131 aa8.3□□□□□ -1.08
VTA1-203ENST00000452973 LOC107984156A0A0G2JMH3 177 aa8.3□□□□□ -1.08
VTA1-203ENST00000452973 H7C2G1 150 aa8.3□□□□□ -1.08
VTA1-203ENST00000452973 MUSTN1Q8IVN3 82 aa8.3□□□□□ -1.08
VTA1-203ENST00000452973 ARL17AQ8IVW1 177 aa8.3□□□□□ -1.08
VTA1-203ENST00000452973 CDC42SE2Q9NRR3 84 aa8.3□□□□□ -1.08
VTA1-203ENST00000452973 OXLD1Q5BKU9 147 aa8.29□□□□□ -1.08
VTA1-203ENST00000452973 A4D1N5 150 aa8.29□□□□□ -1.08
VTA1-203ENST00000452973 SBSPONQ8IVN8 264 aa8.29□□□□□ -1.08
VTA1-203ENST00000452973 DAND5Q8N907 189 aa8.29□□□□□ -1.08
VTA1-203ENST00000452973 FBN1P35555 2871 aaKnown RBP8.29□□□□□ -1.08
VTA1-203ENST00000452973 H3BMG7 143 aa8.28□□□□□ -1.08
VTA1-203ENST00000452973 SPANXB1Q9NS25 103 aaPredicted RBP8.28□□□□□ -1.08
VTA1-203ENST00000452973 PKD1L1Q8TDX9 2849 aa8.28□□□□□ -1.08
VTA1-203ENST00000452973 CFC1BP0CG36 223 aa8.28□□□□□ -1.08
VTA1-203ENST00000452973 CFC1P0CG37 223 aa8.28□□□□□ -1.08
VTA1-203ENST00000452973 APOC4P55056 127 aa8.28□□□□□ -1.08
VTA1-203ENST00000452973 KIR2DL5BQ8NHK3 375 aa8.28□□□□□ -1.08
VTA1-203ENST00000452973 IGLV4-60A0A075B6I1 120 aa8.28□□□□□ -1.08
VTA1-203ENST00000452973 TRBV6-8A0A0A6YYG3 113 aa8.28□□□□□ -1.08
VTA1-203ENST00000452973 IGHV4-28A0A0C4DH34 117 aa8.28□□□□□ -1.08
VTA1-203ENST00000452973 A0A1B0GWB2 263 aa8.28□□□□□ -1.08
VTA1-203ENST00000452973 TMEM262E9PQX1 116 aa8.28□□□□□ -1.08
VTA1-203ENST00000452973 HTN3P15516 51 aa8.28□□□□□ -1.08
VTA1-203ENST00000452973 HERVK_113P63121 156 aa8.28□□□□□ -1.08
VTA1-203ENST00000452973 ADAMTSL4-AS1Q5T5F5 129 aa8.28□□□□□ -1.08
VTA1-203ENST00000452973 GTSF1LQ9H1H1 148 aa8.28□□□□□ -1.08
VTA1-203ENST00000452973 IGHV4-30-4P0DP06 118 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms