RNA–Protein interactions for RNA: ENST00000450743.5

UBE2D4-207, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-207ENST00000450743 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.1□□□□□ -0.31
UBE2D4-207ENST00000450743 C7orf77A4D0Y5 90 aa13.1□□□□□ -0.31
UBE2D4-207ENST00000450743 MRPL52Q86TS9 123 aaKnown RBP13.1□□□□□ -0.31
UBE2D4-207ENST00000450743 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.1□□□□□ -0.31
UBE2D4-207ENST00000450743 FCER1GP30273 86 aa13.09□□□□□ -0.31
UBE2D4-207ENST00000450743 LINC00959A0A1B0GUT2 108 aa13.08□□□□□ -0.32
UBE2D4-207ENST00000450743 LINC00862A6NCI5 91 aa13.08□□□□□ -0.32
UBE2D4-207ENST00000450743 PANO1I0J062 215 aa13.08□□□□□ -0.32
UBE2D4-207ENST00000450743 PPP1R2P9O14990 202 aa13.08□□□□□ -0.32
UBE2D4-207ENST00000450743 CDC42SE2Q9NRR3 84 aa13.08□□□□□ -0.32
UBE2D4-207ENST00000450743 IGHV3-64A0A075B6Q5 118 aa13.07□□□□□ -0.32
UBE2D4-207ENST00000450743 KRTAP10-4P60372 401 aaPredicted RBP13.07□□□□□ -0.32
UBE2D4-207ENST00000450743 FOXI1Q12951 378 aa13.07□□□□□ -0.32
UBE2D4-207ENST00000450743 MRPL54Q6P161 138 aaKnown RBP13.07□□□□□ -0.32
UBE2D4-207ENST00000450743 ZNF664Q8N3J9 261 aa13.07□□□□□ -0.32
UBE2D4-207ENST00000450743 KIR2DL4Q99706 377 aa13.07□□□□□ -0.32
UBE2D4-207ENST00000450743 S100A8P05109 93 aa13.06□□□□□ -0.32
UBE2D4-207ENST00000450743 CKS2P33552 79 aa13.06□□□□□ -0.32
UBE2D4-207ENST00000450743 XCL1P47992 114 aa13.06□□□□□ -0.32
UBE2D4-207ENST00000450743 HBBP68871 147 aa13.06□□□□□ -0.32
UBE2D4-207ENST00000450743 HIGD2BQ4VC39 106 aa13.06□□□□□ -0.32
UBE2D4-207ENST00000450743 C20orf78Q9BR46 151 aa13.06□□□□□ -0.32
UBE2D4-207ENST00000450743 TRBV24-1A0A075B6N3 115 aa13.05□□□□□ -0.32
UBE2D4-207ENST00000450743 A0A1B0GXF2 115 aa13.05□□□□□ -0.32
UBE2D4-207ENST00000450743 CCL25O15444 150 aa13.05□□□□□ -0.32
UBE2D4-207ENST00000450743 GVQW2A0A096LPI5 108 aaPredicted RBP13.04□□□□□ -0.32
UBE2D4-207ENST00000450743 F8W036 122 aa13.04□□□□□ -0.32
UBE2D4-207ENST00000450743 RAB14P61106 215 aa13.04□□□□□ -0.32
UBE2D4-207ENST00000450743 CIRBPQ14011 172 aaKnown RBP13.04□□□□□ -0.32
UBE2D4-207ENST00000450743 SS18Q15532 418 aa13.04□□□□□ -0.32
UBE2D4-207ENST00000450743 TNFRSF6BO95407 300 aa13.03□□□□□ -0.32
UBE2D4-207ENST00000450743 RPL32P62910 135 aaKnown RBP13.03□□□□□ -0.32
UBE2D4-207ENST00000450743 SMAGPQ0VAQ4 97 aa13.03□□□□□ -0.32
UBE2D4-207ENST00000450743 UBE2D4Q9Y2X8 147 aa13.03□□□□□ -0.32
UBE2D4-207ENST00000450743 CSDC2Q9Y534 153 aaKnown RBP13.03□□□□□ -0.32
UBE2D4-207ENST00000450743 HERC1Q15751 4861 aa13.02□□□□□ -0.32
UBE2D4-207ENST00000450743 D6R8Y8 96 aa13.02□□□□□ -0.33
UBE2D4-207ENST00000450743 CD164L2Q6UWJ8 174 aa13.01□□□□□ -0.33
UBE2D4-207ENST00000450743 CHTF8P0CG12 524 aa13□□□□□ -0.33
UBE2D4-207ENST00000450743 PNRC1Q12796 327 aaPredicted RBP13□□□□□ -0.33
UBE2D4-207ENST00000450743 ATP5L2Q7Z4Y8 100 aa13□□□□□ -0.33
UBE2D4-207ENST00000450743 SMIM2Q9BVW6 85 aa13□□□□□ -0.33
UBE2D4-207ENST00000450743 IGHV1-58A0A0C4DH39 117 aa12.99□□□□□ -0.33
UBE2D4-207ENST00000450743 TCAPO15273 167 aa12.99□□□□□ -0.33
UBE2D4-207ENST00000450743 NPYP01303 97 aa12.99□□□□□ -0.33
UBE2D4-207ENST00000450743 PPBPP02775 128 aa12.99□□□□□ -0.33
UBE2D4-207ENST00000450743 RPL37AP61513 92 aaKnown RBP12.99□□□□□ -0.33
UBE2D4-207ENST00000450743 TMEM18Q96B42 140 aa12.99□□□□□ -0.33
UBE2D4-207ENST00000450743 DPH3Q96FX2 82 aa12.99□□□□□ -0.33
UBE2D4-207ENST00000450743 TIMM21Q9BVV7 248 aa12.99□□□□□ -0.33
UBE2D4-207ENST00000450743 C1orf196B1AJZ1 125 aa12.98□□□□□ -0.33
UBE2D4-207ENST00000450743 PHOX2AO14813 284 aa12.98□□□□□ -0.33
UBE2D4-207ENST00000450743 COX6A2Q02221 97 aa12.98□□□□□ -0.33
UBE2D4-207ENST00000450743 RNASE13Q5GAN3 156 aaKnown RBP12.98□□□□□ -0.33
UBE2D4-207ENST00000450743 SPACA4Q8TDM5 124 aa12.98□□□□□ -0.33
UBE2D4-207ENST00000450743 A0A087WYN8 130 aa12.97□□□□□ -0.33
UBE2D4-207ENST00000450743 PRSS3P2Q8NHM4 247 aa12.97□□□□□ -0.33
UBE2D4-207ENST00000450743 ANAPC16Q96DE5 110 aa12.97□□□□□ -0.33
UBE2D4-207ENST00000450743 KRTAP29-1A8MX34 341 aaPredicted RBP12.96□□□□□ -0.33
UBE2D4-207ENST00000450743 J3QL48 77 aa12.96□□□□□ -0.33
UBE2D4-207ENST00000450743 MT-ND4LP03901 98 aa12.96□□□□□ -0.33
UBE2D4-207ENST00000450743 CLLU1Q5K131 121 aa12.96□□□□□ -0.33
UBE2D4-207ENST00000450743 Q6ZUT4 128 aa12.96□□□□□ -0.33
UBE2D4-207ENST00000450743 ORMDL3Q8N138 153 aa12.96□□□□□ -0.33
UBE2D4-207ENST00000450743 LINC00526Q96FQ7 95 aa12.96□□□□□ -0.33
UBE2D4-207ENST00000450743 RPL39P62891 51 aaKnown RBP12.95□□□□□ -0.34
UBE2D4-207ENST00000450743 TMEM136Q6ZRR5 245 aa12.95□□□□□ -0.34
UBE2D4-207ENST00000450743 TRAV13-1A0A0B4J241 112 aa12.94□□□□□ -0.34
UBE2D4-207ENST00000450743 PRELID3AQ96N28 172 aa12.94□□□□□ -0.34
UBE2D4-207ENST00000450743 PKHD1L1Q86WI1 4243 aa12.94□□□□□ -0.34
UBE2D4-207ENST00000450743 ZNF561-AS1K7EIQ3 104 aa12.93□□□□□ -0.34
UBE2D4-207ENST00000450743 PLAC8Q9NZF1 115 aa12.93□□□□□ -0.34
UBE2D4-207ENST00000450743 IGKV2-24A0A0C4DH68 120 aa12.92□□□□□ -0.34
UBE2D4-207ENST00000450743 COX7A2LO14548 114 aa12.92□□□□□ -0.34
UBE2D4-207ENST00000450743 MALP21145 153 aa12.92□□□□□ -0.34
UBE2D4-207ENST00000450743 FAM104AQ969W3 186 aa12.92□□□□□ -0.34
UBE2D4-207ENST00000450743 CARD19Q96LW7 228 aa12.92□□□□□ -0.34
UBE2D4-207ENST00000450743 SPANXA1Q9NS26 97 aa12.92□□□□□ -0.34
UBE2D4-207ENST00000450743 MAJINQ3KP22 176 aa12.91□□□□□ -0.34
UBE2D4-207ENST00000450743 A0A096LNI7 61 aa12.9□□□□□ -0.34
UBE2D4-207ENST00000450743 HNRNPA3P51991 378 aaKnown RBP12.9□□□□□ -0.34
UBE2D4-207ENST00000450743 SYCNQ0VAF6 134 aa12.9□□□□□ -0.34
UBE2D4-207ENST00000450743 OPRPNQ99935 248 aaPredicted RBP12.9□□□□□ -0.34
UBE2D4-207ENST00000450743 LRP1Q07954 4544 aaKnown RBP12.89□□□□□ -0.35
UBE2D4-207ENST00000450743 RAB5AP20339 215 aa12.89□□□□□ -0.35
UBE2D4-207ENST00000450743 MRPS36P82909 103 aaKnown RBP12.89□□□□□ -0.35
UBE2D4-207ENST00000450743 IFITM2Q01629 132 aa12.89□□□□□ -0.35
UBE2D4-207ENST00000450743 C5orf38Q86SI9 138 aa12.89□□□□□ -0.35
UBE2D4-207ENST00000450743 PKIGQ9Y2B9 76 aa12.89□□□□□ -0.35
UBE2D4-207ENST00000450743 IGLV4-69A0A075B6H9 119 aa12.88□□□□□ -0.35
UBE2D4-207ENST00000450743 PRSS47A8MTI9 375 aa12.88□□□□□ -0.35
UBE2D4-207ENST00000450743 LAMTOR2Q9Y2Q5 125 aa12.88□□□□□ -0.35
UBE2D4-207ENST00000450743 OXTP01178 125 aa12.87□□□□□ -0.35
UBE2D4-207ENST00000450743 STPG4Q8N801 248 aa12.87□□□□□ -0.35
UBE2D4-207ENST00000450743 LOC389332A0A1B0GUA5 103 aa12.86□□□□□ -0.35
UBE2D4-207ENST00000450743 UQCC3Q6UW78 93 aa12.86□□□□□ -0.35
UBE2D4-207ENST00000450743 MAP1LC3AQ9H492 121 aa12.86□□□□□ -0.35
UBE2D4-207ENST00000450743 FAT3Q8TDW7 4589 aa12.86□□□□□ -0.35
UBE2D4-207ENST00000450743 APOMO95445 188 aa12.85□□□□□ -0.35
UBE2D4-207ENST00000450743 ADCYAP1P18509 176 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms