RNA–Protein interactions for RNA: ENST00000450686.1

LINC01004-202, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 3 BASIC

Gene LINC01004, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-202ENST00000450686 A0A0J9YXV3 536 aa6.3□□□□□ -1.4
LINC01004-202ENST00000450686 HMSDA8MTL9 139 aa6.3□□□□□ -1.4
LINC01004-202ENST00000450686 F2Z2F3 143 aa6.3□□□□□ -1.4
LINC01004-202ENST00000450686 APCSP02743 223 aa6.3□□□□□ -1.4
LINC01004-202ENST00000450686 MEF2BQ02080 365 aaPredicted RBP6.3□□□□□ -1.4
LINC01004-202ENST00000450686 CFAP161Q6P656 301 aa6.3□□□□□ -1.4
LINC01004-202ENST00000450686 C9orf62Q8N4C0 152 aa6.3□□□□□ -1.4
LINC01004-202ENST00000450686 XKRY2A2RUG3 117 aa6.29□□□□□ -1.4
LINC01004-202ENST00000450686 FAM231BA6NCW3 169 aa6.29□□□□□ -1.4
LINC01004-202ENST00000450686 SDHAF1A6NFY7 115 aa6.29□□□□□ -1.4
LINC01004-202ENST00000450686 CCL25O15444 150 aa6.29□□□□□ -1.4
LINC01004-202ENST00000450686 KRTAP10-8P60410 259 aa6.29□□□□□ -1.4
LINC01004-202ENST00000450686 RPP21Q9H633 154 aaKnown RBP6.29□□□□□ -1.4
LINC01004-202ENST00000450686 TMEM242Q9NWH2 141 aa6.29□□□□□ -1.4
LINC01004-202ENST00000450686 TRAV1-1A0A0B4J248 108 aa6.28□□□□□ -1.4
LINC01004-202ENST00000450686 BCL2P10415 239 aa6.28□□□□□ -1.4
LINC01004-202ENST00000450686 OCC1Q8TAD7 63 aa6.28□□□□□ -1.4
LINC01004-202ENST00000450686 CARD19Q96LW7 228 aa6.28□□□□□ -1.4
LINC01004-202ENST00000450686 LINC00959A0A1B0GUT2 108 aa6.27□□□□□ -1.41
LINC01004-202ENST00000450686 TSHBP01222 138 aa6.27□□□□□ -1.41
LINC01004-202ENST00000450686 C21orf62-AS1Q17RA5 79 aa6.27□□□□□ -1.41
LINC01004-202ENST00000450686 RNASE13Q5GAN3 156 aaKnown RBP6.27□□□□□ -1.41
LINC01004-202ENST00000450686 CNFNQ9BYD5 112 aa6.27□□□□□ -1.41
LINC01004-202ENST00000450686 A0A1W2PNN7 141 aa6.26□□□□□ -1.41
LINC01004-202ENST00000450686 PDE6DO43924 150 aa6.26□□□□□ -1.41
LINC01004-202ENST00000450686 PMCHP20382 165 aa6.26□□□□□ -1.41
LINC01004-202ENST00000450686 GAGE2BQ13066 116 aa6.26□□□□□ -1.41
LINC01004-202ENST00000450686 SRSF9Q13242 221 aaKnown RBP eCLIP6.26□□□□□ -1.417e-7■■■□□ 16.2
LINC01004-202ENST00000450686 SPINK6Q6UWN8 80 aa6.26□□□□□ -1.41
LINC01004-202ENST00000450686 OR5A1Q8NGJ0 315 aa6.26□□□□□ -1.41
LINC01004-202ENST00000450686 SMIM12Q96EX1 92 aa6.26□□□□□ -1.41
LINC01004-202ENST00000450686 IGHV1-58A0A0C4DH39 117 aa6.25□□□□□ -1.41
LINC01004-202ENST00000450686 SMKR1H3BMG3 65 aa6.25□□□□□ -1.41
LINC01004-202ENST00000450686 NCR2O95944 276 aa6.25□□□□□ -1.41
LINC01004-202ENST00000450686 EIF5AP63241 154 aaKnown RBP6.25□□□□□ -1.41
LINC01004-202ENST00000450686 SYCNQ0VAF6 134 aa6.25□□□□□ -1.41
LINC01004-202ENST00000450686 REG3GQ6UW15 175 aa6.25□□□□□ -1.41
LINC01004-202ENST00000450686 IGLV4-69A0A075B6H9 119 aa6.24□□□□□ -1.41
LINC01004-202ENST00000450686 I3L3M4 83 aa6.24□□□□□ -1.41
LINC01004-202ENST00000450686 ESDP10768 282 aa6.24□□□□□ -1.41
LINC01004-202ENST00000450686 CEBPGP53567 150 aa6.24□□□□□ -1.41
LINC01004-202ENST00000450686 PTTG1IPP53801 180 aa6.24□□□□□ -1.41
LINC01004-202ENST00000450686 Q6ZRP5 223 aa6.24□□□□□ -1.41
LINC01004-202ENST00000450686 TMEM101Q96IK0 257 aa6.24□□□□□ -1.41
LINC01004-202ENST00000450686 BTF3L4Q96K17 158 aa6.24□□□□□ -1.41
LINC01004-202ENST00000450686 TEX46H3BTG2 121 aa6.23□□□□□ -1.41
LINC01004-202ENST00000450686 GATCO43716 136 aaKnown RBP6.23□□□□□ -1.41
LINC01004-202ENST00000450686 CAMPP49913 170 aa6.23□□□□□ -1.41
LINC01004-202ENST00000450686 PHF5AQ7RTV0 110 aaKnown RBP6.23□□□□□ -1.41
LINC01004-202ENST00000450686 SMIM15Q7Z3B0 74 aa6.23□□□□□ -1.41
LINC01004-202ENST00000450686 ST20Q9HBF5 79 aa6.23□□□□□ -1.41
LINC01004-202ENST00000450686 BIN3Q9NQY0 253 aa6.23□□□□□ -1.41
LINC01004-202ENST00000450686 CDC42SE2Q9NRR3 84 aa6.23□□□□□ -1.41
LINC01004-202ENST00000450686 PSORS1C2Q9UIG4 136 aa6.23□□□□□ -1.41
LINC01004-202ENST00000450686 H7C423 109 aa6.22□□□□□ -1.41
LINC01004-202ENST00000450686 ZNF25P17030 456 aaPredicted RBP6.22□□□□□ -1.41
LINC01004-202ENST00000450686 RPL18AQ02543 176 aaKnown RBP6.22□□□□□ -1.41
LINC01004-202ENST00000450686 SS18Q15532 418 aa6.22□□□□□ -1.41
LINC01004-202ENST00000450686 CD164L2Q6UWJ8 174 aa6.22□□□□□ -1.41
LINC01004-202ENST00000450686 ZNF664Q8N3J9 261 aa6.22□□□□□ -1.41
LINC01004-202ENST00000450686 MRAP2Q96G30 205 aa6.22□□□□□ -1.41
LINC01004-202ENST00000450686 OPRPNQ99935 248 aaPredicted RBP6.22□□□□□ -1.41
LINC01004-202ENST00000450686 TRBV6-5A0A0K0K1A5 114 aa6.21□□□□□ -1.42
LINC01004-202ENST00000450686 LOC107984640A0A0U1RRK4 108 aa6.21□□□□□ -1.42
LINC01004-202ENST00000450686 C9orf116Q5BN46 136 aaPredicted RBP6.21□□□□□ -1.42
LINC01004-202ENST00000450686 C5orf38Q86SI9 138 aa6.21□□□□□ -1.42
LINC01004-202ENST00000450686 KRTAP11-1Q8IUC1 163 aa6.21□□□□□ -1.42
LINC01004-202ENST00000450686 AMN1Q8IY45 258 aa6.21□□□□□ -1.42
LINC01004-202ENST00000450686 LINC00474Q9P2X8 69 aa6.21□□□□□ -1.42
LINC01004-202ENST00000450686 MUC2Q02817 5179 aa6.2□□□□□ -1.42
LINC01004-202ENST00000450686 TRAV13-1A0A0B4J241 112 aa6.2□□□□□ -1.42
LINC01004-202ENST00000450686 FAM168BA1KXE4 195 aa6.2□□□□□ -1.42
LINC01004-202ENST00000450686 C7orf77A4D0Y5 90 aa6.2□□□□□ -1.42
LINC01004-202ENST00000450686 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.2□□□□□ -1.42
LINC01004-202ENST00000450686 MT-ND6P03923 174 aa6.2□□□□□ -1.42
LINC01004-202ENST00000450686 MALP21145 153 aa6.2□□□□□ -1.42
LINC01004-202ENST00000450686 POLR2KP53803 58 aaKnown RBP6.2□□□□□ -1.42
LINC01004-202ENST00000450686 C1orf137Q5JT78 98 aa6.2□□□□□ -1.42
LINC01004-202ENST00000450686 EIF5AL1Q6IS14 154 aaKnown RBP6.2□□□□□ -1.42
LINC01004-202ENST00000450686 Q6ZUT4 128 aa6.2□□□□□ -1.42
LINC01004-202ENST00000450686 PRR26Q8N8Z3 221 aa6.2□□□□□ -1.42
LINC01004-202ENST00000450686 NUP35Q8NFH5 326 aa6.2□□□□□ -1.42
LINC01004-202ENST00000450686 CAMK2N2Q96S95 79 aa6.2□□□□□ -1.42
LINC01004-202ENST00000450686 KRTAP3-1Q9BYR8 98 aa6.2□□□□□ -1.42
LINC01004-202ENST00000450686 HIGD1CA8MV81 97 aa6.19□□□□□ -1.42
LINC01004-202ENST00000450686 COX7A2LO14548 114 aa6.19□□□□□ -1.42
LINC01004-202ENST00000450686 RAB4AP20338 218 aa6.19□□□□□ -1.42
LINC01004-202ENST00000450686 TEX261Q6UWH6 196 aa6.19□□□□□ -1.42
LINC01004-202ENST00000450686 MRPL52Q86TS9 123 aaKnown RBP6.19□□□□□ -1.42
LINC01004-202ENST00000450686 KRTAP9-3Q9BYQ3 159 aa6.19□□□□□ -1.42
LINC01004-202ENST00000450686 TMA7Q9Y2S6 64 aaKnown RBP6.19□□□□□ -1.42
LINC01004-202ENST00000450686 TRBV27A0A0K0K1C4 114 aa6.18□□□□□ -1.42
LINC01004-202ENST00000450686 A8MWL6 223 aa6.18□□□□□ -1.42
LINC01004-202ENST00000450686 RNF151Q2KHN1 245 aa6.18□□□□□ -1.42
LINC01004-202ENST00000450686 ALKAL2Q6UX46 152 aa6.18□□□□□ -1.42
LINC01004-202ENST00000450686 SLC51BQ86UW2 128 aa6.18□□□□□ -1.42
LINC01004-202ENST00000450686 TMEM191AQ9H0A3 160 aa6.18□□□□□ -1.42
LINC01004-202ENST00000450686 UBE2D4Q9Y2X8 147 aa6.18□□□□□ -1.42
LINC01004-202ENST00000450686 A0A1B0GUT8 65 aa6.17□□□□□ -1.42
LINC01004-202ENST00000450686 APOMO95445 188 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms