RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 H0Y8G0 127 aa11.68□□□□□ -0.54
PRPF40A-204ENST00000450303 K7EMI3 77 aa11.68□□□□□ -0.54
PRPF40A-204ENST00000450303 LAGE3Q14657 143 aa11.68□□□□□ -0.54
PRPF40A-204ENST00000450303 RPL39LQ96EH5 51 aaKnown RBP11.68□□□□□ -0.54
PRPF40A-204ENST00000450303 DNAH11Q96DT5 4516 aa11.68□□□□□ -0.54
PRPF40A-204ENST00000450303 ATP5LO75964 103 aa11.67□□□□□ -0.54
PRPF40A-204ENST00000450303 IGLC3P0DOY3 106 aa11.67□□□□□ -0.54
PRPF40A-204ENST00000450303 HNRNPA3P51991 378 aaKnown RBP11.67□□□□□ -0.54
PRPF40A-204ENST00000450303 NEGR1Q7Z3B1 354 aa11.67□□□□□ -0.54
PRPF40A-204ENST00000450303 DAZ4Q86SG3 579 aaKnown RBP11.67□□□□□ -0.54
PRPF40A-204ENST00000450303 NRACQ8N912 160 aa11.67□□□□□ -0.54
PRPF40A-204ENST00000450303 ATP6V0E2Q8NHE4 81 aa11.67□□□□□ -0.54
PRPF40A-204ENST00000450303 DAZ3Q9NR90 486 aaKnown RBP11.67□□□□□ -0.54
PRPF40A-204ENST00000450303 GAS8-AS1O95177 125 aa11.66□□□□□ -0.54
PRPF40A-204ENST00000450303 G0S2P27469 103 aa11.66□□□□□ -0.54
PRPF40A-204ENST00000450303 UBE2D3P61077 147 aa11.66□□□□□ -0.54
PRPF40A-204ENST00000450303 SUMO2P61956 95 aaKnown RBP11.66□□□□□ -0.54
PRPF40A-204ENST00000450303 UBE2D2P62837 147 aa11.66□□□□□ -0.54
PRPF40A-204ENST00000450303 ORMDL2Q53FV1 153 aa11.66□□□□□ -0.54
PRPF40A-204ENST00000450303 TTC32Q5I0X7 151 aa11.66□□□□□ -0.54
PRPF40A-204ENST00000450303 Q6ZN92 141 aa11.66□□□□□ -0.54
PRPF40A-204ENST00000450303 C2orf88Q9BSF0 95 aa11.66□□□□□ -0.54
PRPF40A-204ENST00000450303 SDHAF1A6NFY7 115 aa11.65□□□□□ -0.54
PRPF40A-204ENST00000450303 TMEM97Q5BJF2 176 aa11.65□□□□□ -0.54
PRPF40A-204ENST00000450303 SMIM2Q9BVW6 85 aa11.65□□□□□ -0.54
PRPF40A-204ENST00000450303 A0A096LNJ9 63 aa11.64□□□□□ -0.55
PRPF40A-204ENST00000450303 VCYO14598 125 aa11.64□□□□□ -0.55
PRPF40A-204ENST00000450303 LINC00694P0DN24 101 aa11.64□□□□□ -0.55
PRPF40A-204ENST00000450303 RPL32P62910 135 aaKnown RBP11.64□□□□□ -0.55
PRPF40A-204ENST00000450303 LYPD5Q6UWN5 251 aa11.64□□□□□ -0.55
PRPF40A-204ENST00000450303 PMCHL2Q9BQD1 86 aa11.64□□□□□ -0.55
PRPF40A-204ENST00000450303 KRTAP17-1Q9BYP8 105 aa11.64□□□□□ -0.55
PRPF40A-204ENST00000450303 Q9UF83 564 aa11.64□□□□□ -0.55
PRPF40A-204ENST00000450303 LINC01549A6NIU2 74 aa11.63□□□□□ -0.55
PRPF40A-204ENST00000450303 I3L3M4 83 aa11.63□□□□□ -0.55
PRPF40A-204ENST00000450303 TCAPO15273 167 aa11.63□□□□□ -0.55
PRPF40A-204ENST00000450303 SIVA1O15304 175 aa11.63□□□□□ -0.55
PRPF40A-204ENST00000450303 GTSF1LQ9H1H1 148 aa11.63□□□□□ -0.55
PRPF40A-204ENST00000450303 POLR2KP53803 58 aaKnown RBP11.62□□□□□ -0.55
PRPF40A-204ENST00000450303 COTL1Q14019 142 aa11.62□□□□□ -0.55
PRPF40A-204ENST00000450303 KIR2DL4Q99706 377 aa11.62□□□□□ -0.55
PRPF40A-204ENST00000450303 IGHV3-38A0A0C4DH36 116 aa11.61□□□□□ -0.55
PRPF40A-204ENST00000450303 TRBV27A0A0K0K1C4 114 aa11.61□□□□□ -0.55
PRPF40A-204ENST00000450303 PRSS1P07477 247 aa11.61□□□□□ -0.55
PRPF40A-204ENST00000450303 SLC25A34Q6PIV7 304 aa11.61□□□□□ -0.55
PRPF40A-204ENST00000450303 hDV102S1A0JD36 115 aa11.6□□□□□ -0.55
PRPF40A-204ENST00000450303 C16orf90A8MZG2 172 aa11.6□□□□□ -0.55
PRPF40A-204ENST00000450303 TIRAPP58753 221 aa11.6□□□□□ -0.55
PRPF40A-204ENST00000450303 MAJINQ3KP22 176 aa11.6□□□□□ -0.55
PRPF40A-204ENST00000450303 EREGO14944 169 aa11.59□□□□□ -0.55
PRPF40A-204ENST00000450303 SNHG12Q9BXW3 62 aa11.59□□□□□ -0.55
PRPF40A-204ENST00000450303 TRBV25-1A0A075B6N4 114 aa11.57□□□□□ -0.56
PRPF40A-204ENST00000450303 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.57□□□□□ -0.56
PRPF40A-204ENST00000450303 LELP1Q5T871 98 aa11.57□□□□□ -0.56
PRPF40A-204ENST00000450303 WFDC10BQ8IUB3 73 aa11.57□□□□□ -0.56
PRPF40A-204ENST00000450303 TRBV6-8A0A0A6YYG3 113 aa11.56□□□□□ -0.56
PRPF40A-204ENST00000450303 TRAV8-6A0A0B4J262 113 aa11.56□□□□□ -0.56
PRPF40A-204ENST00000450303 DPM2O94777 84 aa11.55□□□□□ -0.56
PRPF40A-204ENST00000450303 BATFQ16520 125 aa11.55□□□□□ -0.56
PRPF40A-204ENST00000450303 COL5A1-AS1Q5SY13 56 aa11.55□□□□□ -0.56
PRPF40A-204ENST00000450303 TOMM6Q96B49 74 aa11.55□□□□□ -0.56
PRPF40A-204ENST00000450303 SCGB3A1Q96QR1 104 aa11.55□□□□□ -0.56
PRPF40A-204ENST00000450303 TSHBP01222 138 aa11.54□□□□□ -0.56
PRPF40A-204ENST00000450303 IGKCP01834 107 aa11.54□□□□□ -0.56
PRPF40A-204ENST00000450303 COX8AP10176 69 aa11.54□□□□□ -0.56
PRPF40A-204ENST00000450303 KRTAP10-2P60368 255 aa11.54□□□□□ -0.56
PRPF40A-204ENST00000450303 Q6ZRN7 208 aaPredicted RBP11.54□□□□□ -0.56
PRPF40A-204ENST00000450303 TMEM243Q9BU79 118 aa11.54□□□□□ -0.56
PRPF40A-204ENST00000450303 RYR1P21817 5038 aa11.53□□□□□ -0.56
PRPF40A-204ENST00000450303 UBE2L6O14933 153 aa11.53□□□□□ -0.56
PRPF40A-204ENST00000450303 SMAGPQ0VAQ4 97 aa11.53□□□□□ -0.56
PRPF40A-204ENST00000450303 NTM-AS1Q6ZSK4 140 aa11.53□□□□□ -0.56
PRPF40A-204ENST00000450303 DEFB104AQ8WTQ1 72 aa11.53□□□□□ -0.56
PRPF40A-204ENST00000450303 CYSLTR1Q9Y271 337 aa11.53□□□□□ -0.56
PRPF40A-204ENST00000450303 A0A087WX48 190 aa11.52□□□□□ -0.57
PRPF40A-204ENST00000450303 TRAV12-1A0A0B4J245 112 aa11.52□□□□□ -0.57
PRPF40A-204ENST00000450303 PLNP26678 52 aa11.52□□□□□ -0.57
PRPF40A-204ENST00000450303 ODF1Q14990 250 aa11.52□□□□□ -0.57
PRPF40A-204ENST00000450303 CHCHD5Q9BSY4 110 aa11.52□□□□□ -0.57
PRPF40A-204ENST00000450303 A0A1B0GV90 55 aa11.51□□□□□ -0.57
PRPF40A-204ENST00000450303 H7C423 109 aa11.51□□□□□ -0.57
PRPF40A-204ENST00000450303 FUSP35637 526 aaKnown RBP eCLIP11.51□□□□□ -0.57
PRPF40A-204ENST00000450303 LCE2DQ5TA82 110 aaPredicted RBP11.51□□□□□ -0.57
PRPF40A-204ENST00000450303 C2orf66Q6UXQ4 117 aa11.51□□□□□ -0.57
PRPF40A-204ENST00000450303 ERASQ7Z444 233 aa11.5□□□□□ -0.57
PRPF40A-204ENST00000450303 CHCHD7Q9BUK0 85 aa11.5□□□□□ -0.57
PRPF40A-204ENST00000450303 PCLOQ9Y6V0 5065 aa11.5□□□□□ -0.57
PRPF40A-204ENST00000450303 LRP1BQ9NZR2 4599 aa11.49□□□□□ -0.57
PRPF40A-204ENST00000450303 TMEM262E9PQX1 116 aa11.49□□□□□ -0.57
PRPF40A-204ENST00000450303 DNAH10OSP0CZ25 163 aa11.49□□□□□ -0.57
PRPF40A-204ENST00000450303 TMEM141Q96I45 108 aa11.49□□□□□ -0.57
PRPF40A-204ENST00000450303 DLEU1O43261 78 aa11.48□□□□□ -0.57
PRPF40A-204ENST00000450303 ANKRD39Q53RE8 183 aa11.48□□□□□ -0.57
PRPF40A-204ENST00000450303 C20orf203Q8NBC4 194 aa11.48□□□□□ -0.57
PRPF40A-204ENST00000450303 KRTAP4-5Q9BYR2 181 aa11.48□□□□□ -0.57
PRPF40A-204ENST00000450303 F8VRH5 84 aa11.47□□□□□ -0.57
PRPF40A-204ENST00000450303 HINT1P49773 126 aaPredicted RBP11.47□□□□□ -0.57
PRPF40A-204ENST00000450303 GAGE6Q13070 117 aa11.47□□□□□ -0.57
PRPF40A-204ENST00000450303 PAPPA-AS1Q5QFB9 102 aa11.47□□□□□ -0.57
PRPF40A-204ENST00000450303 AMMECR1LQ6DCA0 310 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms