RNA–Protein interactions for RNA: ENST00000449469.5

SNHG17-207, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2

Gene SNHG17, Length 2,138 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-207ENST00000449469 SNCGO76070 127 aa12.12□□□□□ -0.47
SNHG17-207ENST00000449469 HERV-K104P63124 156 aa12.12□□□□□ -0.47
SNHG17-207ENST00000449469 MRPL23Q16540 153 aaKnown RBP12.12□□□□□ -0.47
SNHG17-207ENST00000449469 LINC00242Q5T6M2 205 aa12.12□□□□□ -0.47
SNHG17-207ENST00000449469 Q6Q795 121 aa12.12□□□□□ -0.47
SNHG17-207ENST00000449469 XCL2Q9UBD3 114 aa12.12□□□□□ -0.47
SNHG17-207ENST00000449469 SORL1Q92673 2214 aa12.12□□□□□ -0.47
SNHG17-207ENST00000449469 A8MZ25 164 aa12.11□□□□□ -0.47
SNHG17-207ENST00000449469 C1orf158Q8N1D5 194 aa12.11□□□□□ -0.47
SNHG17-207ENST00000449469 TRGV1A0A0A0MS02 117 aa12.11□□□□□ -0.47
SNHG17-207ENST00000449469 DEFB121Q5J5C9 76 aa12.11□□□□□ -0.47
SNHG17-207ENST00000449469 LINC00308Q8TCZ7 52 aa12.11□□□□□ -0.47
SNHG17-207ENST00000449469 Q9H8V8 135 aa12.1□□□□□ -0.47
SNHG17-207ENST00000449469 TEX49A0A1B0GTD5 131 aa12.09□□□□□ -0.47
SNHG17-207ENST00000449469 SMIM1B2RUZ4 78 aa12.09□□□□□ -0.47
SNHG17-207ENST00000449469 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.09□□□□□ -0.47
SNHG17-207ENST00000449469 COL12A1Q99715 3063 aa12.09□□□□□ -0.47
SNHG17-207ENST00000449469 COX6A2Q02221 97 aa12.08□□□□□ -0.47
SNHG17-207ENST00000449469 NPC2P61916 151 aa12.08□□□□□ -0.48
SNHG17-207ENST00000449469 GAGE2BQ13066 116 aa12.08□□□□□ -0.48
SNHG17-207ENST00000449469 GAGE2EQ4V326 116 aa12.08□□□□□ -0.48
SNHG17-207ENST00000449469 Q6ZSV7 163 aa12.08□□□□□ -0.48
SNHG17-207ENST00000449469 GAGE2DQ9UEU5 116 aa12.08□□□□□ -0.48
SNHG17-207ENST00000449469 Q96MF0 132 aa12.07□□□□□ -0.48
SNHG17-207ENST00000449469 ZNF625Q96I27 306 aaPredicted RBP12.07□□□□□ -0.48
SNHG17-207ENST00000449469 FAM110AQ9BQ89 295 aa12.07□□□□□ -0.48
SNHG17-207ENST00000449469 CDC42SE2Q9NRR3 84 aa12.07□□□□□ -0.48
SNHG17-207ENST00000449469 COX7A2LO14548 114 aa12.06□□□□□ -0.48
SNHG17-207ENST00000449469 CLEC2BQ92478 149 aa12.06□□□□□ -0.48
SNHG17-207ENST00000449469 CITED2Q99967 270 aaPredicted RBP12.06□□□□□ -0.48
SNHG17-207ENST00000449469 ANAPC13Q9BS18 74 aa12.06□□□□□ -0.48
SNHG17-207ENST00000449469 CREBBPQ92793 2442 aa12.06□□□□□ -0.48
SNHG17-207ENST00000449469 CCL24O00175 119 aa12.05□□□□□ -0.48
SNHG17-207ENST00000449469 USP9XQ93008 2570 aaPredicted RBP12.05□□□□□ -0.48
SNHG17-207ENST00000449469 LINC00694P0DN24 101 aa12.05□□□□□ -0.48
SNHG17-207ENST00000449469 PRIMA1Q86XR5 153 aa12.05□□□□□ -0.48
SNHG17-207ENST00000449469 C16orf74Q96GX8 76 aa12.05□□□□□ -0.48
SNHG17-207ENST00000449469 TMEM243Q9BU79 118 aa12.05□□□□□ -0.48
SNHG17-207ENST00000449469 F5H768 121 aa12.04□□□□□ -0.48
SNHG17-207ENST00000449469 UBE2L6O14933 153 aa12.04□□□□□ -0.48
SNHG17-207ENST00000449469 SHISA2Q6UWI4 295 aa12.04□□□□□ -0.48
SNHG17-207ENST00000449469 NTM-AS1Q6ZSK4 140 aa12.04□□□□□ -0.48
SNHG17-207ENST00000449469 ANKRD17O75179 2603 aaKnown RBP12.04□□□□□ -0.48
SNHG17-207ENST00000449469 PF4P02776 101 aa12.04□□□□□ -0.48
SNHG17-207ENST00000449469 Q6ZTI0 123 aa12.04□□□□□ -0.48
SNHG17-207ENST00000449469 DAND5Q8N907 189 aa12.04□□□□□ -0.48
SNHG17-207ENST00000449469 TRAV13-1A0A0B4J241 112 aa12.03□□□□□ -0.48
SNHG17-207ENST00000449469 MEIG1Q5JSS6 88 aa12.03□□□□□ -0.48
SNHG17-207ENST00000449469 TRAV26-1A0A087WT03 109 aa12.02□□□□□ -0.48
SNHG17-207ENST00000449469 ACYP1P07311 99 aa12.02□□□□□ -0.48
SNHG17-207ENST00000449469 CACNA1AO00555 2505 aa12.02□□□□□ -0.49
SNHG17-207ENST00000449469 TRBV6-4A0A1B0GX49 114 aa12.02□□□□□ -0.49
SNHG17-207ENST00000449469 DNAJC9-AS1A6NH13 148 aa12.02□□□□□ -0.49
SNHG17-207ENST00000449469 TRACP01848 142 aa12.02□□□□□ -0.49
SNHG17-207ENST00000449469 FAM222AQ5U5X8 452 aa12.02□□□□□ -0.49
SNHG17-207ENST00000449469 CFAP46Q8IYW2 2715 aa12.01□□□□□ -0.49
SNHG17-207ENST00000449469 KRTAP10-9P60411 292 aa12.01□□□□□ -0.49
SNHG17-207ENST00000449469 GAGE12JA6NER3 117 aa12.01□□□□□ -0.49
SNHG17-207ENST00000449469 GAGE4Q13068 117 aa12.01□□□□□ -0.49
SNHG17-207ENST00000449469 GAGE5Q13069 117 aa12.01□□□□□ -0.49
SNHG17-207ENST00000449469 C15orf53Q8NAA6 179 aa12.01□□□□□ -0.49
SNHG17-207ENST00000449469 KRTAP1-3Q8IUG1 177 aa12□□□□□ -0.49
SNHG17-207ENST00000449469 CELSR2Q9HCU4 2923 aa11.99□□□□□ -0.49
SNHG17-207ENST00000449469 TRAV13-2A0A0B4J235 113 aa11.99□□□□□ -0.49
SNHG17-207ENST00000449469 TTC32Q5I0X7 151 aa11.99□□□□□ -0.49
SNHG17-207ENST00000449469 OVOL2Q9BRP0 275 aa11.99□□□□□ -0.49
SNHG17-207ENST00000449469 NOP10Q9NPE3 64 aaKnown RBP11.99□□□□□ -0.49
SNHG17-207ENST00000449469 USP9YO00507 2555 aaPredicted RBP11.98□□□□□ -0.49
SNHG17-207ENST00000449469 NDUFV3P56181 108 aaKnown RBP11.98□□□□□ -0.49
SNHG17-207ENST00000449469 SOSTDC1Q6X4U4 206 aa11.98□□□□□ -0.49
SNHG17-207ENST00000449469 PIEZO1Q92508 2521 aa11.96□□□□□ -0.49
SNHG17-207ENST00000449469 TRGV2A0A075B6R0 118 aa11.96□□□□□ -0.49
SNHG17-207ENST00000449469 CRLF1O75462 422 aa11.96□□□□□ -0.49
SNHG17-207ENST00000449469 NDUFA7O95182 113 aa11.96□□□□□ -0.49
SNHG17-207ENST00000449469 PLAC8L1A1L4L8 177 aa11.96□□□□□ -0.5
SNHG17-207ENST00000449469 A0A1W2PRX2 142 aa11.95□□□□□ -0.5
SNHG17-207ENST00000449469 GIG44P09565 113 aaPredicted RBP11.95□□□□□ -0.5
SNHG17-207ENST00000449469 GAGE6Q13070 117 aa11.95□□□□□ -0.5
SNHG17-207ENST00000449469 HIST2H2BCQ6DN03 193 aa11.95□□□□□ -0.5
SNHG17-207ENST00000449469 HIST2H2BDQ6DRA6 164 aa11.95□□□□□ -0.5
SNHG17-207ENST00000449469 ZNF843Q8N446 348 aa11.95□□□□□ -0.5
SNHG17-207ENST00000449469 COX7B2Q8TF08 81 aa11.95□□□□□ -0.5
SNHG17-207ENST00000449469 C16orf95Q9H693 158 aa11.95□□□□□ -0.5
SNHG17-207ENST00000449469 ACACBO00763 2458 aa11.95□□□□□ -0.5
SNHG17-207ENST00000449469 PRB1P04280 392 aa11.95□□□□□ -0.5
SNHG17-207ENST00000449469 FLNCQ14315 2725 aa11.95□□□□□ -0.5
SNHG17-207ENST00000449469 IGSF10Q6WRI0 2623 aa11.94□□□□□ -0.5
SNHG17-207ENST00000449469 CRYBG3Q68DQ2 2970 aa11.94□□□□□ -0.5
SNHG17-207ENST00000449469 TRBV7-7A0A0K0K1E9 115 aa11.93□□□□□ -0.5
SNHG17-207ENST00000449469 CRPP02741 224 aa11.93□□□□□ -0.5
SNHG17-207ENST00000449469 RPL28P46779 137 aaKnown RBP11.93□□□□□ -0.5
SNHG17-207ENST00000449469 IGLV1-51P01701 117 aa11.93□□□□□ -0.5
SNHG17-207ENST00000449469 IMUPQ9GZP8 106 aa11.93□□□□□ -0.5
SNHG17-207ENST00000449469 TRGV4A0A0C4DH28 118 aa11.92□□□□□ -0.5
SNHG17-207ENST00000449469 A0A0U1RRA0 63 aa11.92□□□□□ -0.5
SNHG17-207ENST00000449469 GAGE7O76087 117 aa11.92□□□□□ -0.5
SNHG17-207ENST00000449469 NHLRC4P0CG21 123 aaPredicted RBP11.92□□□□□ -0.5
SNHG17-207ENST00000449469 GAGE12FP0CL80 117 aa11.92□□□□□ -0.5
SNHG17-207ENST00000449469 GAGE12GP0CL81 117 aa11.92□□□□□ -0.5
SNHG17-207ENST00000449469 GAGE12IP0CL82 117 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms