RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 AMMECR1LQ6DCA0 310 aa5.09□□□□□ -1.59
AC004540.1-206ENST00000448056 FA2HQ7L5A8 372 aa5.09□□□□□ -1.59
AC004540.1-206ENST00000448056 MRPL52Q86TS9 123 aaKnown RBP5.09□□□□□ -1.59
AC004540.1-206ENST00000448056 C10orf126Q8N4M7 172 aa5.09□□□□□ -1.59
AC004540.1-206ENST00000448056 TMEM18Q96B42 140 aa5.09□□□□□ -1.59
AC004540.1-206ENST00000448056 URB1-AS1Q96HZ7 61 aa5.09□□□□□ -1.59
AC004540.1-206ENST00000448056 KLK12Q9UKR0 248 aa5.09□□□□□ -1.59
AC004540.1-206ENST00000448056 SACSQ9NZJ4 4579 aa5.08□□□□□ -1.6
AC004540.1-206ENST00000448056 ANGP03950 147 aaKnown RBP5.08□□□□□ -1.6
AC004540.1-206ENST00000448056 ZNF25P17030 456 aaPredicted RBP5.08□□□□□ -1.6
AC004540.1-206ENST00000448056 G0S2P27469 103 aa5.08□□□□□ -1.6
AC004540.1-206ENST00000448056 RAB5BP61020 215 aa5.08□□□□□ -1.6
AC004540.1-206ENST00000448056 RPL39P62891 51 aaKnown RBP5.08□□□□□ -1.6
AC004540.1-206ENST00000448056 ODF1Q14990 250 aa5.08□□□□□ -1.6
AC004540.1-206ENST00000448056 RNASEKQ6P5S7 137 aaKnown RBP5.08□□□□□ -1.6
AC004540.1-206ENST00000448056 LINC00269Q8N2A0 174 aa5.08□□□□□ -1.6
AC004540.1-206ENST00000448056 TMEM101Q96IK0 257 aa5.08□□□□□ -1.6
AC004540.1-206ENST00000448056 TIMM21Q9BVV7 248 aa5.08□□□□□ -1.6
AC004540.1-206ENST00000448056 UBE2D4Q9Y2X8 147 aa5.08□□□□□ -1.6
AC004540.1-206ENST00000448056 CSDC2Q9Y534 153 aaKnown RBP5.08□□□□□ -1.6
AC004540.1-206ENST00000448056 RYR3Q15413 4870 aa5.08□□□□□ -1.6
AC004540.1-206ENST00000448056 HYDINQ4G0P3 5121 aa5.07□□□□□ -1.6
AC004540.1-206ENST00000448056 BTF3P20290 206 aaKnown RBP5.07□□□□□ -1.6
AC004540.1-206ENST00000448056 SMAGPQ0VAQ4 97 aa5.07□□□□□ -1.6
AC004540.1-206ENST00000448056 C1orf134Q5TEV5 83 aa5.07□□□□□ -1.6
AC004540.1-206ENST00000448056 DGAT2L7PQ6IED9 249 aa5.07□□□□□ -1.6
AC004540.1-206ENST00000448056 ENHOQ6UWT2 76 aa5.07□□□□□ -1.6
AC004540.1-206ENST00000448056 C2orf66Q6UXQ4 117 aa5.07□□□□□ -1.6
AC004540.1-206ENST00000448056 BAGE3Q86Y29 109 aa5.07□□□□□ -1.6
AC004540.1-206ENST00000448056 OR5A1Q8NGJ0 315 aa5.07□□□□□ -1.6
AC004540.1-206ENST00000448056 CHCHD1Q96BP2 118 aaKnown RBP5.07□□□□□ -1.6
AC004540.1-206ENST00000448056 CDC42SE2Q9NRR3 84 aa5.07□□□□□ -1.6
AC004540.1-206ENST00000448056 PRR34Q9NV39 138 aa5.07□□□□□ -1.6
AC004540.1-206ENST00000448056 PYGO1Q9Y3Y4 419 aa5.07□□□□□ -1.6
AC004540.1-206ENST00000448056 TRAV8-3A0A0A6YYJ7 113 aa5.06□□□□□ -1.6
AC004540.1-206ENST00000448056 IGIPA6NJ69 53 aa5.06□□□□□ -1.6
AC004540.1-206ENST00000448056 HIST1H2BKO60814 126 aa5.06□□□□□ -1.6
AC004540.1-206ENST00000448056 HIST1H2BJP06899 126 aa5.06□□□□□ -1.6
AC004540.1-206ENST00000448056 HIST1H2BOP23527 126 aa5.06□□□□□ -1.6
AC004540.1-206ENST00000448056 HIST1H2BBP33778 126 aa5.06□□□□□ -1.6
AC004540.1-206ENST00000448056 HIST1H2BDP58876 126 aa5.06□□□□□ -1.6
AC004540.1-206ENST00000448056 HIST1H2BCP62807 126 aa5.06□□□□□ -1.6
AC004540.1-206ENST00000448056 REG3AQ06141 175 aa5.06□□□□□ -1.6
AC004540.1-206ENST00000448056 HIST2H2BEQ16778 126 aa5.06□□□□□ -1.6
AC004540.1-206ENST00000448056 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.06□□□□□ -1.6
AC004540.1-206ENST00000448056 C6orf223Q8N319 242 aa5.06□□□□□ -1.6
AC004540.1-206ENST00000448056 ZNF664Q8N3J9 261 aa5.06□□□□□ -1.6
AC004540.1-206ENST00000448056 HIST1H2BHQ93079 126 aa5.06□□□□□ -1.6
AC004540.1-206ENST00000448056 FAM104AQ969W3 186 aa5.06□□□□□ -1.6
AC004540.1-206ENST00000448056 UBE2WQ96B02 151 aa5.06□□□□□ -1.6
AC004540.1-206ENST00000448056 TOMM6Q96B49 74 aa5.06□□□□□ -1.6
AC004540.1-206ENST00000448056 HIST1H2BNQ99877 126 aa5.06□□□□□ -1.6
AC004540.1-206ENST00000448056 HIST1H2BMQ99879 126 aa5.06□□□□□ -1.6
AC004540.1-206ENST00000448056 SPANXA1Q9NS26 97 aa5.06□□□□□ -1.6
AC004540.1-206ENST00000448056 CYSLTR1Q9Y271 337 aa5.06□□□□□ -1.6
AC004540.1-206ENST00000448056 LINC01549A6NIU2 74 aa5.05□□□□□ -1.6
AC004540.1-206ENST00000448056 C1orf196B1AJZ1 125 aa5.05□□□□□ -1.6
AC004540.1-206ENST00000448056 MRPS36P82909 103 aaKnown RBP5.05□□□□□ -1.6
AC004540.1-206ENST00000448056 PMCHL1Q16048 86 aa5.05□□□□□ -1.6
AC004540.1-206ENST00000448056 ERASQ7Z444 233 aa5.05□□□□□ -1.6
AC004540.1-206ENST00000448056 NFE4Q86UQ8 179 aa5.05□□□□□ -1.6
AC004540.1-206ENST00000448056 SCGB3A1Q96QR1 104 aa5.05□□□□□ -1.6
AC004540.1-206ENST00000448056 OPRPNQ99935 248 aaPredicted RBP5.05□□□□□ -1.6
AC004540.1-206ENST00000448056 Q9HAA7 133 aa5.05□□□□□ -1.6
AC004540.1-206ENST00000448056 RYR2Q92736 4967 aa5.05□□□□□ -1.6
AC004540.1-206ENST00000448056 DNAH6Q9C0G6 4158 aa5.05□□□□□ -1.6
AC004540.1-206ENST00000448056 A0A096LNJ9 63 aa5.04□□□□□ -1.6
AC004540.1-206ENST00000448056 NUPR1O60356 82 aa5.04□□□□□ -1.6
AC004540.1-206ENST00000448056 SERF1AO75920 110 aa5.04□□□□□ -1.6
AC004540.1-206ENST00000448056 CRPP02741 224 aa5.04□□□□□ -1.6
AC004540.1-206ENST00000448056 NPSP0C0P6 89 aa5.04□□□□□ -1.6
AC004540.1-206ENST00000448056 MIAQ16674 131 aa5.04□□□□□ -1.6
AC004540.1-206ENST00000448056 CLPSL2Q6UWE3 100 aa5.04□□□□□ -1.6
AC004540.1-206ENST00000448056 Q6ZRN7 208 aaPredicted RBP5.04□□□□□ -1.6
AC004540.1-206ENST00000448056 TMEM141Q96I45 108 aa5.04□□□□□ -1.6
AC004540.1-206ENST00000448056 IGLV4-3A0A075B6K6 122 aa5.03□□□□□ -1.6
AC004540.1-206ENST00000448056 TRAV8-4A0A0B4J246 113 aa5.03□□□□□ -1.6
AC004540.1-206ENST00000448056 IGKV3OR2-268A0A0C4DH90 116 aa5.03□□□□□ -1.6
AC004540.1-206ENST00000448056 LINC00959A0A1B0GUT2 108 aa5.03□□□□□ -1.6
AC004540.1-206ENST00000448056 RTL8CO15255 209 aa5.03□□□□□ -1.6
AC004540.1-206ENST00000448056 HSBP1O75506 76 aa5.03□□□□□ -1.6
AC004540.1-206ENST00000448056 HBDP02042 147 aa5.03□□□□□ -1.6
AC004540.1-206ENST00000448056 RNF151Q2KHN1 245 aa5.03□□□□□ -1.6
AC004540.1-206ENST00000448056 PDZD11Q5EBL8 140 aa5.03□□□□□ -1.6
AC004540.1-206ENST00000448056 RNASE13Q5GAN3 156 aaKnown RBP5.03□□□□□ -1.6
AC004540.1-206ENST00000448056 Q6ZUT4 128 aa5.03□□□□□ -1.6
AC004540.1-206ENST00000448056 FAM19A2Q8N3H0 131 aa5.03□□□□□ -1.6
AC004540.1-206ENST00000448056 RMI2Q96E14 147 aa5.03□□□□□ -1.6
AC004540.1-206ENST00000448056 TIMM17AQ99595 171 aa5.03□□□□□ -1.6
AC004540.1-206ENST00000448056 TM2D2Q9BX73 214 aa5.03□□□□□ -1.6
AC004540.1-206ENST00000448056 VCX2Q9H322 139 aa5.03□□□□□ -1.6
AC004540.1-206ENST00000448056 COX11Q9Y6N1 276 aa5.03□□□□□ -1.6
AC004540.1-206ENST00000448056 IGLV10-54A0A075B6I4 117 aa5.02□□□□□ -1.61
AC004540.1-206ENST00000448056 IGKV2D-24A0A075B6R9 120 aa5.02□□□□□ -1.61
AC004540.1-206ENST00000448056 TRAV13-1A0A0B4J241 112 aa5.02□□□□□ -1.61
AC004540.1-206ENST00000448056 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.02□□□□□ -1.61
AC004540.1-206ENST00000448056 CCL25O15444 150 aa5.02□□□□□ -1.61
AC004540.1-206ENST00000448056 NDUFA6P56556 154 aa5.02□□□□□ -1.61
AC004540.1-206ENST00000448056 SS18Q15532 418 aa5.02□□□□□ -1.61
AC004540.1-206ENST00000448056 COA6Q5JTJ3 125 aaKnown RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms