RNA–Protein interactions for RNA: ENST00000444878.5

RBM39-216, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-216ENST00000444878 SPATA3Q8NHX4 192 aa9.78□□□□□ -0.84
RBM39-216ENST00000444878 OVOL2Q9BRP0 275 aa9.78□□□□□ -0.84
RBM39-216ENST00000444878 FAM104AQ969W3 186 aa9.77□□□□□ -0.84
RBM39-216ENST00000444878 FLNBO75369 2602 aaKnown RBP9.77□□□□□ -0.85
RBM39-216ENST00000444878 RAB37Q96AX2 223 aa9.77□□□□□ -0.85
RBM39-216ENST00000444878 CCL25O15444 150 aa9.76□□□□□ -0.85
RBM39-216ENST00000444878 SMIM13P0DJ93 91 aa9.76□□□□□ -0.85
RBM39-216ENST00000444878 ZNF22P17026 224 aaPredicted RBP9.76□□□□□ -0.85
RBM39-216ENST00000444878 RNASE13Q5GAN3 156 aaKnown RBP9.76□□□□□ -0.85
RBM39-216ENST00000444878 DAZ4Q86SG3 579 aaKnown RBP9.76□□□□□ -0.85
RBM39-216ENST00000444878 DAZ3Q9NR90 486 aaKnown RBP9.76□□□□□ -0.85
RBM39-216ENST00000444878 TMEM223A0PJW6 202 aa9.76□□□□□ -0.85
RBM39-216ENST00000444878 C9orf118A6NHY6 69 aa9.76□□□□□ -0.85
RBM39-216ENST00000444878 AMMECR1LQ6DCA0 310 aa9.76□□□□□ -0.85
RBM39-216ENST00000444878 GAGE12JA6NER3 117 aa9.75□□□□□ -0.85
RBM39-216ENST00000444878 J3QQQ9 107 aa9.75□□□□□ -0.85
RBM39-216ENST00000444878 LGALS3P17931 250 aaKnown RBP9.75□□□□□ -0.85
RBM39-216ENST00000444878 GAGE4Q13068 117 aa9.75□□□□□ -0.85
RBM39-216ENST00000444878 GAGE5Q13069 117 aa9.75□□□□□ -0.85
RBM39-216ENST00000444878 GAGE13Q4V321 117 aa9.75□□□□□ -0.85
RBM39-216ENST00000444878 NHP2Q9NX24 153 aaKnown RBP9.75□□□□□ -0.85
RBM39-216ENST00000444878 TSPEAR-AS2P59090 65 aa9.74□□□□□ -0.85
RBM39-216ENST00000444878 MRPS36P82909 103 aaKnown RBP9.74□□□□□ -0.85
RBM39-216ENST00000444878 PLEKHB2Q96CS7 222 aa9.74□□□□□ -0.85
RBM39-216ENST00000444878 TRGV4A0A0C4DH28 118 aa9.74□□□□□ -0.85
RBM39-216ENST00000444878 H3BUT2 72 aa9.74□□□□□ -0.85
RBM39-216ENST00000444878 UBE2D3P61077 147 aa9.74□□□□□ -0.85
RBM39-216ENST00000444878 UBE2D2P62837 147 aa9.74□□□□□ -0.85
RBM39-216ENST00000444878 Q6ZUT4 128 aa9.74□□□□□ -0.85
RBM39-216ENST00000444878 LEPROTO15243 131 aa9.73□□□□□ -0.85
RBM39-216ENST00000444878 IGHV3-64A0A075B6Q5 118 aa9.73□□□□□ -0.85
RBM39-216ENST00000444878 TRBV6-4A0A1B0GX49 114 aa9.73□□□□□ -0.85
RBM39-216ENST00000444878 SRSF9Q13242 221 aaKnown RBP eCLIP9.73□□□□□ -0.855e-10■■■■□ 22.3
RBM39-216ENST00000444878 NAA38Q9BRA0 125 aaKnown RBP9.73□□□□□ -0.85
RBM39-216ENST00000444878 NBEAL2Q6ZNJ1 2754 aa9.72□□□□□ -0.85
RBM39-216ENST00000444878 K7ERJ3 54 aa9.72□□□□□ -0.85
RBM39-216ENST00000444878 GHRHP01286 108 aa9.72□□□□□ -0.85
RBM39-216ENST00000444878 TIMM21Q9BVV7 248 aa9.72□□□□□ -0.85
RBM39-216ENST00000444878 A0A0J9YY99 117 aa9.71□□□□□ -0.85
RBM39-216ENST00000444878 A0A1B0GV72 72 aa9.71□□□□□ -0.85
RBM39-216ENST00000444878 NTM-AS1Q6ZSK4 140 aa9.71□□□□□ -0.85
RBM39-216ENST00000444878 TINCRA0A1B0GVN0 87 aa9.71□□□□□ -0.86
RBM39-216ENST00000444878 C6orf226Q5I0X4 101 aa9.71□□□□□ -0.86
RBM39-216ENST00000444878 DEFB130BP0DP73 79 aa9.7□□□□□ -0.86
RBM39-216ENST00000444878 DEFB130AP0DP74 79 aa9.7□□□□□ -0.86
RBM39-216ENST00000444878 KIR2DL5BQ8NHK3 375 aa9.7□□□□□ -0.86
RBM39-216ENST00000444878 LOC100131303A0A0U1RQF7 123 aa9.7□□□□□ -0.86
RBM39-216ENST00000444878 SMIM9A6NGZ8 99 aa9.7□□□□□ -0.86
RBM39-216ENST00000444878 LINC00694P0DN24 101 aa9.7□□□□□ -0.86
RBM39-216ENST00000444878 FHL2Q14192 279 aa9.7□□□□□ -0.86
RBM39-216ENST00000444878 C12orf74Q32Q52 190 aa9.7□□□□□ -0.86
RBM39-216ENST00000444878 X6R8D5 127 aa9.7□□□□□ -0.86
RBM39-216ENST00000444878 TRRAPQ9Y4A5 3859 aa9.69□□□□□ -0.86
RBM39-216ENST00000444878 UBE2D1P51668 147 aa9.69□□□□□ -0.86
RBM39-216ENST00000444878 SAMD5Q5TGI4 173 aa9.69□□□□□ -0.86
RBM39-216ENST00000444878 GTSF1LQ9H1H1 148 aa9.69□□□□□ -0.86
RBM39-216ENST00000444878 A0A1W2PPM0 123 aa9.68□□□□□ -0.86
RBM39-216ENST00000444878 IGHV3-30-3P0DP02 117 aa9.68□□□□□ -0.86
RBM39-216ENST00000444878 SMAGPQ0VAQ4 97 aa9.68□□□□□ -0.86
RBM39-216ENST00000444878 GTF2H5Q6ZYL4 71 aa9.68□□□□□ -0.86
RBM39-216ENST00000444878 UBE2L6O14933 153 aa9.68□□□□□ -0.86
RBM39-216ENST00000444878 APOC4P55056 127 aa9.68□□□□□ -0.86
RBM39-216ENST00000444878 WFDC9Q8NEX5 89 aa9.68□□□□□ -0.86
RBM39-216ENST00000444878 TMEM243Q9BU79 118 aa9.68□□□□□ -0.86
RBM39-216ENST00000444878 TRAV8-3A0A0A6YYJ7 113 aa9.67□□□□□ -0.86
RBM39-216ENST00000444878 IGHV1-58A0A0C4DH39 117 aa9.67□□□□□ -0.86
RBM39-216ENST00000444878 SBSPONQ8IVN8 264 aa9.67□□□□□ -0.86
RBM39-216ENST00000444878 SPANXB1Q9NS25 103 aaPredicted RBP9.67□□□□□ -0.86
RBM39-216ENST00000444878 FABP2P12104 132 aa9.67□□□□□ -0.86
RBM39-216ENST00000444878 DEFB135Q30KP9 77 aa9.67□□□□□ -0.86
RBM39-216ENST00000444878 LINC00612Q8N6U2 182 aa9.67□□□□□ -0.86
RBM39-216ENST00000444878 OR5A1Q8NGJ0 315 aa9.67□□□□□ -0.86
RBM39-216ENST00000444878 VPS25Q9BRG1 176 aa9.67□□□□□ -0.86
RBM39-216ENST00000444878 A0A1B0GWB2 263 aa9.65□□□□□ -0.86
RBM39-216ENST00000444878 SPINK8P0C7L1 97 aa9.65□□□□□ -0.86
RBM39-216ENST00000444878 RNF151Q2KHN1 245 aa9.65□□□□□ -0.86
RBM39-216ENST00000444878 K7EP34 96 aa9.65□□□□□ -0.86
RBM39-216ENST00000444878 TMEM101Q96IK0 257 aa9.65□□□□□ -0.86
RBM39-216ENST00000444878 VSIG2Q96IQ7 327 aa9.65□□□□□ -0.86
RBM39-216ENST00000444878 CDC42SE2Q9NRR3 84 aa9.65□□□□□ -0.86
RBM39-216ENST00000444878 CDKN2A-AS1Q9UH64 79 aa9.65□□□□□ -0.86
RBM39-216ENST00000444878 SPCS1Q9Y6A9 102 aa9.65□□□□□ -0.86
RBM39-216ENST00000444878 IGLL5B9A064 214 aa9.64□□□□□ -0.87
RBM39-216ENST00000444878 USP17L23D6RBM5 183 aa9.64□□□□□ -0.87
RBM39-216ENST00000444878 IGHV3-30P01768 117 aa9.64□□□□□ -0.87
RBM39-216ENST00000444878 IGHV3-30-5P0DP03 117 aa9.64□□□□□ -0.87
RBM39-216ENST00000444878 SERTAD4-AS1Q5TG53 156 aa9.64□□□□□ -0.87
RBM39-216ENST00000444878 IGLV5-45A0A087WSX0 123 aa9.64□□□□□ -0.87
RBM39-216ENST00000444878 TRAV13-1A0A0B4J241 112 aa9.64□□□□□ -0.87
RBM39-216ENST00000444878 HERVK_113P63121 156 aa9.64□□□□□ -0.87
RBM39-216ENST00000444878 LINC00242Q5T6M2 205 aa9.64□□□□□ -0.87
RBM39-216ENST00000444878 FAM222AQ5U5X8 452 aa9.64□□□□□ -0.87
RBM39-216ENST00000444878 C10orf126Q8N4M7 172 aa9.64□□□□□ -0.87
RBM39-216ENST00000444878 H7C423 109 aa9.63□□□□□ -0.87
RBM39-216ENST00000444878 TRBV6-8A0A0A6YYG3 113 aa9.62□□□□□ -0.87
RBM39-216ENST00000444878 A0A0J9YXY3 114 aa9.62□□□□□ -0.87
RBM39-216ENST00000444878 LYRM9A8MSI8 78 aa9.62□□□□□ -0.87
RBM39-216ENST00000444878 COX6A2Q02221 97 aa9.62□□□□□ -0.87
RBM39-216ENST00000444878 NDUFA12Q9UI09 145 aa9.62□□□□□ -0.87
RBM39-216ENST00000444878 VPREB1P12018 145 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms