RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 TYMSOSQ8TAI1 123 aa2.42□□□□□ -2.02
UBR3-206ENST00000444475 MINOS1-NBL1R4GNA1 71 aa2.42□□□□□ -2.02
UBR3-206ENST00000444475 IGHV3OR16-8A0A075B7F1 116 aa2.42□□□□□ -2.02
UBR3-206ENST00000444475 GCHFRP30047 84 aa2.42□□□□□ -2.02
UBR3-206ENST00000444475 HILPDAQ9Y5L2 63 aa2.42□□□□□ -2.02
UBR3-206ENST00000444475 PRRC2BQ5JSZ5 2229 aaKnown RBP2.42□□□□□ -2.02
UBR3-206ENST00000444475 TPRP12270 2363 aaKnown RBP2.42□□□□□ -2.02
UBR3-206ENST00000444475 MGST1P10620 155 aaKnown RBP2.42□□□□□ -2.02
UBR3-206ENST00000444475 KRTAP4-12Q9BQ66 201 aa2.42□□□□□ -2.02
UBR3-206ENST00000444475 COL5A1P20908 1838 aaPredicted RBP2.41□□□□□ -2.02
UBR3-206ENST00000444475 TMEM14DPA8MWL7 114 aa2.41□□□□□ -2.02
UBR3-206ENST00000444475 BAALC-AS2P0C853 105 aa2.41□□□□□ -2.02
UBR3-206ENST00000444475 DPTQ07507 201 aa2.41□□□□□ -2.02
UBR3-206ENST00000444475 KLK12Q9UKR0 248 aa2.41□□□□□ -2.02
UBR3-206ENST00000444475 LHFPL6Q9Y693 200 aa2.41□□□□□ -2.02
UBR3-206ENST00000444475 OTOGLQ3ZCN5 2332 aa2.41□□□□□ -2.02
UBR3-206ENST00000444475 ANKRD36A6QL64 1941 aa2.41□□□□□ -2.02
UBR3-206ENST00000444475 MUC3AQ02505 3323 aa2.41□□□□□ -2.02
UBR3-206ENST00000444475 KRTAP24-1Q3LI83 254 aa2.41□□□□□ -2.02
UBR3-206ENST00000444475 ZNF833PQ6ZTB9 187 aa2.41□□□□□ -2.02
UBR3-206ENST00000444475 FXYD6-FXYD2A0A087WZ82 144 aa2.41□□□□□ -2.02
UBR3-206ENST00000444475 F8WEM9 126 aa2.41□□□□□ -2.02
UBR3-206ENST00000444475 ERC2-IT1O76042 136 aa2.41□□□□□ -2.02
UBR3-206ENST00000444475 LIMD2Q9BT23 127 aa2.41□□□□□ -2.02
UBR3-206ENST00000444475 TMEM14BQ9NUH8 114 aa2.41□□□□□ -2.02
UBR3-206ENST00000444475 PSENENQ9NZ42 101 aa2.41□□□□□ -2.02
UBR3-206ENST00000444475 USP9XQ93008 2570 aaPredicted RBP2.41□□□□□ -2.02
UBR3-206ENST00000444475 HELZ2Q9BYK8 2649 aaKnown RBP2.41□□□□□ -2.02
UBR3-206ENST00000444475 CR1P17927 2039 aa2.41□□□□□ -2.02
UBR3-206ENST00000444475 MPDZO75970 2070 aa2.4□□□□□ -2.02
UBR3-206ENST00000444475 TMEM30CPA0ZSE6 113 aa2.4□□□□□ -2.02
UBR3-206ENST00000444475 NDUFAF8A1L188 74 aa2.4□□□□□ -2.02
UBR3-206ENST00000444475 PRB4P10163 310 aaPredicted RBP2.4□□□□□ -2.02
UBR3-206ENST00000444475 PSMG4Q5JS54 123 aa2.4□□□□□ -2.02
UBR3-206ENST00000444475 UBE2D4Q9Y2X8 147 aa2.4□□□□□ -2.02
UBR3-206ENST00000444475 IGHV3-64A0A075B6Q5 118 aa2.4□□□□□ -2.03
UBR3-206ENST00000444475 A0A0D9SFI3 127 aa2.4□□□□□ -2.03
UBR3-206ENST00000444475 C20orf197Q8N268 126 aa2.4□□□□□ -2.03
UBR3-206ENST00000444475 DYNLRB1Q9NP97 96 aa2.4□□□□□ -2.03
UBR3-206ENST00000444475 MYO18BQ8IUG5 2567 aa2.4□□□□□ -2.03
UBR3-206ENST00000444475 MKI67P46013 3256 aaKnown RBP2.4□□□□□ -2.03
UBR3-206ENST00000444475 MYMXA0A1B0GTQ4 84 aa2.4□□□□□ -2.03
UBR3-206ENST00000444475 IGLV7-43P04211 117 aa2.4□□□□□ -2.03
UBR3-206ENST00000444475 HMGA1P17096 107 aaKnown RBP2.4□□□□□ -2.03
UBR3-206ENST00000444475 CNBPP62633 177 aaKnown RBP2.4□□□□□ -2.03
UBR3-206ENST00000444475 DEFB116Q30KQ4 102 aa2.4□□□□□ -2.03
UBR3-206ENST00000444475 SPANXN5Q5MJ07 72 aa2.4□□□□□ -2.03
UBR3-206ENST00000444475 CABIN1Q9Y6J0 2220 aa2.4□□□□□ -2.03
UBR3-206ENST00000444475 H7C423 109 aa2.39□□□□□ -2.03
UBR3-206ENST00000444475 SMIM11AP58511 58 aa2.39□□□□□ -2.03
UBR3-206ENST00000444475 ZNF818PQ6ZRF7 136 aa2.39□□□□□ -2.03
UBR3-206ENST00000444475 SHROOM3Q8TF72 1996 aa2.39□□□□□ -2.03
UBR3-206ENST00000444475 PSCAO43653 123 aa2.39□□□□□ -2.03
UBR3-206ENST00000444475 IGHV3-33P01772 117 aa2.39□□□□□ -2.03
UBR3-206ENST00000444475 IFI27L1Q96BM0 104 aa2.39□□□□□ -2.03
UBR3-206ENST00000444475 IMMP1LQ96LU5 166 aa2.39□□□□□ -2.03
UBR3-206ENST00000444475 LINC00167Q96N53 147 aa2.39□□□□□ -2.03
UBR3-206ENST00000444475 FXYD6Q9H0Q3 95 aa2.39□□□□□ -2.03
UBR3-206ENST00000444475 Q6JHZ5 121 aa2.39□□□□□ -2.03
UBR3-206ENST00000444475 PTPRZ1P23471 2315 aaPredicted RBP2.38□□□□□ -2.03
UBR3-206ENST00000444475 TRAV12-1A0A0B4J245 112 aa2.38□□□□□ -2.03
UBR3-206ENST00000444475 TRAV12-3A0A0B4J271 114 aa2.38□□□□□ -2.03
UBR3-206ENST00000444475 CSAG1Q6PB30 78 aa2.38□□□□□ -2.03
UBR3-206ENST00000444475 UBALD1Q8TB05 177 aa2.38□□□□□ -2.03
UBR3-206ENST00000444475 ZNF861PO60384 105 aa2.38□□□□□ -2.03
UBR3-206ENST00000444475 MDKP21741 143 aaPredicted RBP2.38□□□□□ -2.03
UBR3-206ENST00000444475 KRTAP25-1Q3LHN0 102 aa2.38□□□□□ -2.03
UBR3-206ENST00000444475 PYDC2Q56P42 97 aa2.38□□□□□ -2.03
UBR3-206ENST00000444475 Q6ZS52 159 aa2.38□□□□□ -2.03
UBR3-206ENST00000444475 CACNA1IQ9P0X4 2223 aa2.38□□□□□ -2.03
UBR3-206ENST00000444475 TNRC6BQ9UPQ9 1833 aaKnown RBP2.38□□□□□ -2.03
UBR3-206ENST00000444475 Q9Y3F1 56 aa2.38□□□□□ -2.03
UBR3-206ENST00000444475 TRANK1O15050 2925 aa2.38□□□□□ -2.03
UBR3-206ENST00000444475 TRAV10A0A0B4J240 114 aa2.38□□□□□ -2.03
UBR3-206ENST00000444475 KRTAP15-1Q3LI76 137 aa2.38□□□□□ -2.03
UBR3-206ENST00000444475 MED13Q9UHV7 2174 aa2.38□□□□□ -2.03
UBR3-206ENST00000444475 TFF1P04155 84 aa2.37□□□□□ -2.03
UBR3-206ENST00000444475 RIF1Q5UIP0 2472 aaKnown RBP2.37□□□□□ -2.03
UBR3-206ENST00000444475 HCRTO43612 131 aa2.37□□□□□ -2.03
UBR3-206ENST00000444475 COX6CP09669 75 aa2.37□□□□□ -2.03
UBR3-206ENST00000444475 GDF5OSQ5U4N7 250 aa2.37□□□□□ -2.03
UBR3-206ENST00000444475 C6orf201Q7Z4U5 140 aa2.37□□□□□ -2.03
UBR3-206ENST00000444475 A6NIN4 97 aa2.37□□□□□ -2.03
UBR3-206ENST00000444475 PDE6HQ13956 83 aa2.37□□□□□ -2.03
UBR3-206ENST00000444475 KPRPQ5T749 579 aaPredicted RBP2.37□□□□□ -2.03
UBR3-206ENST00000444475 CLECL1Q8IZS7 167 aa2.37□□□□□ -2.03
UBR3-206ENST00000444475 REV3LO60673 3130 aa2.37□□□□□ -2.03
UBR3-206ENST00000444475 CEP250Q9BV73 2442 aa2.37□□□□□ -2.03
UBR3-206ENST00000444475 CHKB-CPT1BH3BT56 60 aa2.36□□□□□ -2.03
UBR3-206ENST00000444475 EDDM3BP56851 147 aa2.36□□□□□ -2.03
UBR3-206ENST00000444475 NDUFA4L2Q9NRX3 87 aa2.36□□□□□ -2.03
UBR3-206ENST00000444475 PLAC8Q9NZF1 115 aa2.36□□□□□ -2.03
UBR3-206ENST00000444475 TRAV23DV6A0A075B6W5 121 aa2.36□□□□□ -2.03
UBR3-206ENST00000444475 TRBV7-4A0A0J9YYF1 115 aa2.36□□□□□ -2.03
UBR3-206ENST00000444475 A0A1B0GWA3 101 aa2.36□□□□□ -2.03
UBR3-206ENST00000444475 ARHGAP32A7KAX9 2087 aa2.36□□□□□ -2.03
UBR3-206ENST00000444475 DCHS1Q96JQ0 3298 aa2.36□□□□□ -2.03
UBR3-206ENST00000444475 CHD9Q3L8U1 2897 aa2.36□□□□□ -2.03
UBR3-206ENST00000444475 TEP1Q99973 2627 aaKnown RBP2.36□□□□□ -2.03
UBR3-206ENST00000444475 TRBV6-8A0A0A6YYG3 113 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms