RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 PATE2Q6UY27 113 aa2.09□□□□□ -2.07
LIG4-203ENST00000442234 C14orf178Q8N769 122 aaPredicted RBP2.09□□□□□ -2.07
LIG4-203ENST00000442234 DAND5Q8N907 189 aa2.09□□□□□ -2.07
LIG4-203ENST00000442234 TMEM75Q8N9X5 138 aa2.09□□□□□ -2.07
LIG4-203ENST00000442234 SPTSSBQ8NFR3 76 aa2.09□□□□□ -2.07
LIG4-203ENST00000442234 Q8TAT8 98 aa2.09□□□□□ -2.07
LIG4-203ENST00000442234 LEAP2Q969E1 77 aa2.09□□□□□ -2.07
LIG4-203ENST00000442234 TIMM17AQ99595 171 aa2.09□□□□□ -2.07
LIG4-203ENST00000442234 CSMD3Q7Z407 3707 aa2.09□□□□□ -2.07
LIG4-203ENST00000442234 IGKV3-7A0A075B6H7 116 aa2.09□□□□□ -2.07
LIG4-203ENST00000442234 F5H697 171 aa2.09□□□□□ -2.07
LIG4-203ENST00000442234 I3L3M4 83 aa2.09□□□□□ -2.07
LIG4-203ENST00000442234 GAS8-AS1O95177 125 aa2.09□□□□□ -2.07
LIG4-203ENST00000442234 TFF1P04155 84 aa2.09□□□□□ -2.07
LIG4-203ENST00000442234 CCKP06307 115 aa2.09□□□□□ -2.07
LIG4-203ENST00000442234 APOC4P55056 127 aa2.09□□□□□ -2.07
LIG4-203ENST00000442234 KRTAP19-4Q3LI73 84 aa2.09□□□□□ -2.07
LIG4-203ENST00000442234 Q6JHZ5 121 aa2.09□□□□□ -2.07
LIG4-203ENST00000442234 IGKV2-40A0A087WW87 121 aaPredicted RBP2.09□□□□□ -2.08
LIG4-203ENST00000442234 TMEM223A0PJW6 202 aa2.09□□□□□ -2.08
LIG4-203ENST00000442234 E7EQL1 145 aa2.09□□□□□ -2.08
LIG4-203ENST00000442234 M0R381 172 aa2.09□□□□□ -2.08
LIG4-203ENST00000442234 SS18L1O75177 396 aaPredicted RBP2.09□□□□□ -2.08
LIG4-203ENST00000442234 IGKV2D-40P01614 121 aaPredicted RBP2.09□□□□□ -2.08
LIG4-203ENST00000442234 ATP5EP56381 51 aaPredicted RBP2.09□□□□□ -2.08
LIG4-203ENST00000442234 BRWD1-AS2P59051 145 aa2.09□□□□□ -2.08
LIG4-203ENST00000442234 SUMO2P61956 95 aaKnown RBP2.09□□□□□ -2.08
LIG4-203ENST00000442234 SEM1Q6ZVN7 128 aa2.09□□□□□ -2.08
LIG4-203ENST00000442234 FAM216BQ8N7L0 139 aa2.09□□□□□ -2.08
LIG4-203ENST00000442234 NRACQ8N912 160 aa2.09□□□□□ -2.08
LIG4-203ENST00000442234 SPATA3Q8NHX4 192 aa2.09□□□□□ -2.08
LIG4-203ENST00000442234 C14orf132Q9NPU4 83 aa2.09□□□□□ -2.08
LIG4-203ENST00000442234 TMEM14BQ9NUH8 114 aa2.09□□□□□ -2.08
LIG4-203ENST00000442234 PLAC8L1A1L4L8 177 aa2.08□□□□□ -2.08
LIG4-203ENST00000442234 NDUFB3O43676 98 aa2.08□□□□□ -2.08
LIG4-203ENST00000442234 PSPNO60542 156 aa2.08□□□□□ -2.08
LIG4-203ENST00000442234 NXPH4O95158 308 aa2.08□□□□□ -2.08
LIG4-203ENST00000442234 IGKV3-11P04433 115 aa2.08□□□□□ -2.08
LIG4-203ENST00000442234 EGR2P11161 476 aaPredicted RBP2.08□□□□□ -2.08
LIG4-203ENST00000442234 ECSCRQ19T08 205 aa2.08□□□□□ -2.08
LIG4-203ENST00000442234 Q9UF83 564 aa2.08□□□□□ -2.08
LIG4-203ENST00000442234 TET2Q6N021 2002 aaPredicted RBP2.08□□□□□ -2.08
LIG4-203ENST00000442234 UBE2L6O14933 153 aa2.08□□□□□ -2.08
LIG4-203ENST00000442234 EFNA2O43921 213 aa2.08□□□□□ -2.08
LIG4-203ENST00000442234 RNASE1P07998 156 aaKnown RBP2.08□□□□□ -2.08
LIG4-203ENST00000442234 ZNF826PQ6ZT77 177 aa2.08□□□□□ -2.08
LIG4-203ENST00000442234 FP248Q71RG6 208 aaPredicted RBP2.08□□□□□ -2.08
LIG4-203ENST00000442234 C11orf45Q8TAV5 145 aa2.08□□□□□ -2.08
LIG4-203ENST00000442234 UPK3BQ9BT76 320 aa2.08□□□□□ -2.08
LIG4-203ENST00000442234 UBL5Q9BZL1 73 aa2.08□□□□□ -2.08
LIG4-203ENST00000442234 SAA1P0DJI8 122 aaPredicted RBP2.08□□□□□ -2.08
LIG4-203ENST00000442234 VPREB1P12018 145 aa2.08□□□□□ -2.08
LIG4-203ENST00000442234 GP9P14770 177 aa2.08□□□□□ -2.08
LIG4-203ENST00000442234 BLCAPP62952 87 aa2.08□□□□□ -2.08
LIG4-203ENST00000442234 PAX8Q06710 450 aa2.08□□□□□ -2.08
LIG4-203ENST00000442234 C10orf55Q5SWW7 151 aa2.08□□□□□ -2.08
LIG4-203ENST00000442234 WFDC9Q8NEX5 89 aa2.08□□□□□ -2.08
LIG4-203ENST00000442234 RMI2Q96E14 147 aa2.08□□□□□ -2.08
LIG4-203ENST00000442234 CTSZQ9UBR2 303 aa2.08□□□□□ -2.08
LIG4-203ENST00000442234 A0A087WZ39 114 aa2.08□□□□□ -2.08
LIG4-203ENST00000442234 NDUFC1O43677 76 aa2.08□□□□□ -2.08
LIG4-203ENST00000442234 LY6G6CO95867 125 aa2.08□□□□□ -2.08
LIG4-203ENST00000442234 TRGV3P03979 118 aa2.08□□□□□ -2.08
LIG4-203ENST00000442234 CLPSP04118 112 aa2.08□□□□□ -2.08
LIG4-203ENST00000442234 HILS1P60008 231 aa2.08□□□□□ -2.08
LIG4-203ENST00000442234 DAZAP2Q15038 168 aaPredicted RBP2.08□□□□□ -2.08
LIG4-203ENST00000442234 DGAT2L7PQ6IED9 249 aa2.08□□□□□ -2.08
LIG4-203ENST00000442234 IGFL2Q6UWQ7 119 aa2.08□□□□□ -2.08
LIG4-203ENST00000442234 ENHOQ6UWT2 76 aa2.08□□□□□ -2.08
LIG4-203ENST00000442234 DYNLRB2Q8TF09 96 aa2.08□□□□□ -2.08
LIG4-203ENST00000442234 TOMM6Q96B49 74 aa2.08□□□□□ -2.08
LIG4-203ENST00000442234 RNF185Q96GF1 192 aa2.08□□□□□ -2.08
LIG4-203ENST00000442234 KRTAP4-12Q9BQ66 201 aa2.08□□□□□ -2.08
LIG4-203ENST00000442234 SRXN1Q9BYN0 137 aa2.08□□□□□ -2.08
LIG4-203ENST00000442234 PHLDA3Q9Y5J5 127 aa2.08□□□□□ -2.08
LIG4-203ENST00000442234 COX7A2LO14548 114 aa2.07□□□□□ -2.08
LIG4-203ENST00000442234 LEPROTO15243 131 aa2.07□□□□□ -2.08
LIG4-203ENST00000442234 PPP1R17O96001 155 aa2.07□□□□□ -2.08
LIG4-203ENST00000442234 SAA2P0DJI9 122 aaPredicted RBP2.07□□□□□ -2.08
LIG4-203ENST00000442234 CRIP1P50238 77 aa2.07□□□□□ -2.08
LIG4-203ENST00000442234 HAMPP81172 84 aa2.07□□□□□ -2.08
LIG4-203ENST00000442234 COL7A1Q02388 2944 aa2.07□□□□□ -2.08
LIG4-203ENST00000442234 CLEC19AQ6UXS0 136 aa2.07□□□□□ -2.08
LIG4-203ENST00000442234 Q6ZSV7 163 aa2.07□□□□□ -2.08
LIG4-203ENST00000442234 FGF23Q9GZV9 251 aaPredicted RBP2.07□□□□□ -2.08
LIG4-203ENST00000442234 Q9HAA7 133 aa2.07□□□□□ -2.08
LIG4-203ENST00000442234 RBM12B-AS1Q9P1G2 102 aa2.07□□□□□ -2.08
LIG4-203ENST00000442234 NDUFA12Q9UI09 145 aa2.07□□□□□ -2.08
LIG4-203ENST00000442234 TRAV7A0A075B6U4 112 aa2.07□□□□□ -2.08
LIG4-203ENST00000442234 B4DSR2 109 aa2.07□□□□□ -2.08
LIG4-203ENST00000442234 TRBV12-3P01733 135 aa2.07□□□□□ -2.08
LIG4-203ENST00000442234 IGHV4-31P0DP07 118 aa2.07□□□□□ -2.08
LIG4-203ENST00000442234 RPL27AP46776 148 aaKnown RBP2.07□□□□□ -2.08
LIG4-203ENST00000442234 TSPEAR-AS2P59090 65 aa2.07□□□□□ -2.08
LIG4-203ENST00000442234 LINC01356Q8N9X3 169 aa2.07□□□□□ -2.08
LIG4-203ENST00000442234 FLVCR1-AS1Q8TAF5 88 aa2.07□□□□□ -2.08
LIG4-203ENST00000442234 KRTAP9-8Q9BYQ0 159 aa2.07□□□□□ -2.08
LIG4-203ENST00000442234 RNF7Q9UBF6 113 aa2.07□□□□□ -2.08
LIG4-203ENST00000442234 IGHV1OR15-1A0A075B7D0 117 aa2.07□□□□□ -2.08
LIG4-203ENST00000442234 IGHV1-58A0A0C4DH39 117 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms