RNA–Protein interactions for RNA: ENST00000441756.1

MCF2L-217, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-217ENST00000441756 VCX2Q9H322 139 aa10.94□□□□□ -0.66
MCF2L-217ENST00000441756 MRPS16Q9Y3D3 137 aaKnown RBP10.94□□□□□ -0.66
MCF2L-217ENST00000441756 PMVKQ15126 192 aa10.93□□□□□ -0.66
MCF2L-217ENST00000441756 PRKDCP78527 4128 aaKnown RBP10.92□□□□□ -0.66
MCF2L-217ENST00000441756 LGALS9CQ6DKI2 356 aa10.92□□□□□ -0.66
MCF2L-217ENST00000441756 Q6ZUT4 128 aa10.92□□□□□ -0.66
MCF2L-217ENST00000441756 ZNF664Q8N3J9 261 aa10.92□□□□□ -0.66
MCF2L-217ENST00000441756 APLNQ9ULZ1 77 aa10.92□□□□□ -0.66
MCF2L-217ENST00000441756 COL7A1Q02388 2944 aa10.92□□□□□ -0.66
MCF2L-217ENST00000441756 SCGB1D1O95968 90 aa10.91□□□□□ -0.66
MCF2L-217ENST00000441756 RBX1P62877 108 aa10.91□□□□□ -0.66
MCF2L-217ENST00000441756 MPV17L2Q567V2 206 aa10.91□□□□□ -0.66
MCF2L-217ENST00000441756 CDC42SE2Q9NRR3 84 aa10.91□□□□□ -0.66
MCF2L-217ENST00000441756 JOSD1Q15040 202 aaPredicted RBP10.9□□□□□ -0.66
MCF2L-217ENST00000441756 LINC01545Q5VT33 79 aa10.9□□□□□ -0.66
MCF2L-217ENST00000441756 UBE2DNLQ8IWF7 75 aa10.9□□□□□ -0.66
MCF2L-217ENST00000441756 AMELXQ99217 191 aa10.9□□□□□ -0.66
MCF2L-217ENST00000441756 PRSS29PA6NIE9 313 aa10.89□□□□□ -0.67
MCF2L-217ENST00000441756 ODF1Q14990 250 aa10.89□□□□□ -0.67
MCF2L-217ENST00000441756 OPRPNQ99935 248 aaPredicted RBP10.89□□□□□ -0.67
MCF2L-217ENST00000441756 UPK3BQ9BT76 320 aa10.89□□□□□ -0.67
MCF2L-217ENST00000441756 CST9LQ9H4G1 147 aa10.89□□□□□ -0.67
MCF2L-217ENST00000441756 CHTOPQ9Y3Y2 248 aaKnown RBP10.89□□□□□ -0.67
MCF2L-217ENST00000441756 LINC00588Q9Y4M8 146 aa10.89□□□□□ -0.67
MCF2L-217ENST00000441756 F8VRH5 84 aa10.88□□□□□ -0.67
MCF2L-217ENST00000441756 SMIM6P0DI80 62 aa10.88□□□□□ -0.67
MCF2L-217ENST00000441756 PLNP26678 52 aa10.88□□□□□ -0.67
MCF2L-217ENST00000441756 ZFAND6Q6FIF0 208 aa10.88□□□□□ -0.67
MCF2L-217ENST00000441756 WFDC10BQ8IUB3 73 aa10.88□□□□□ -0.67
MCF2L-217ENST00000441756 TGP01266 2768 aa10.87□□□□□ -0.67
MCF2L-217ENST00000441756 IGLV4-60A0A075B6I1 120 aa10.87□□□□□ -0.67
MCF2L-217ENST00000441756 ANGP03950 147 aaKnown RBP10.87□□□□□ -0.67
MCF2L-217ENST00000441756 SEC11AP67812 179 aa10.87□□□□□ -0.67
MCF2L-217ENST00000441756 LINC01556Q5JQF7 62 aa10.87□□□□□ -0.67
MCF2L-217ENST00000441756 Q8N976 141 aa10.87□□□□□ -0.67
MCF2L-217ENST00000441756 SIVA1O15304 175 aa10.86□□□□□ -0.67
MCF2L-217ENST00000441756 DPM2O94777 84 aa10.86□□□□□ -0.67
MCF2L-217ENST00000441756 RNASE13Q5GAN3 156 aaKnown RBP10.86□□□□□ -0.67
MCF2L-217ENST00000441756 C3orf84H3BNL1 204 aa10.85□□□□□ -0.67
MCF2L-217ENST00000441756 CCL25O15444 150 aa10.85□□□□□ -0.67
MCF2L-217ENST00000441756 DNAH10OSP0CZ25 163 aa10.85□□□□□ -0.67
MCF2L-217ENST00000441756 PYY3Q5JQD4 70 aa10.85□□□□□ -0.67
MCF2L-217ENST00000441756 FAM104AQ969W3 186 aa10.85□□□□□ -0.67
MCF2L-217ENST00000441756 MRPL35Q9NZE8 188 aaKnown RBP10.85□□□□□ -0.67
MCF2L-217ENST00000441756 K7EP13 123 aa10.84□□□□□ -0.67
MCF2L-217ENST00000441756 IGHV3-30P01768 117 aa10.84□□□□□ -0.67
MCF2L-217ENST00000441756 IGHV3-33P01772 117 aa10.84□□□□□ -0.67
MCF2L-217ENST00000441756 IGKCP01834 107 aa10.84□□□□□ -0.67
MCF2L-217ENST00000441756 CRPP02741 224 aa10.84□□□□□ -0.67
MCF2L-217ENST00000441756 IGHV3-30-3P0DP02 117 aa10.84□□□□□ -0.67
MCF2L-217ENST00000441756 IGHV3-30-5P0DP03 117 aa10.84□□□□□ -0.67
MCF2L-217ENST00000441756 TRAV9-2A0A087WT02 112 aa10.83□□□□□ -0.68
MCF2L-217ENST00000441756 IGLC3P0DOY3 106 aa10.83□□□□□ -0.68
MCF2L-217ENST00000441756 UBE2D1P51668 147 aa10.83□□□□□ -0.68
MCF2L-217ENST00000441756 SS18Q15532 418 aa10.83□□□□□ -0.68
MCF2L-217ENST00000441756 ZC2HC1BQ5TFG8 222 aa10.83□□□□□ -0.68
MCF2L-217ENST00000441756 C10orf126Q8N4M7 172 aa10.83□□□□□ -0.68
MCF2L-217ENST00000441756 PMCHL2Q9BQD1 86 aa10.83□□□□□ -0.68
MCF2L-217ENST00000441756 TRAV13-1A0A0B4J241 112 aa10.82□□□□□ -0.68
MCF2L-217ENST00000441756 TINCRA0A1B0GVN0 87 aa10.82□□□□□ -0.68
MCF2L-217ENST00000441756 HERVK_113P63121 156 aa10.82□□□□□ -0.68
MCF2L-217ENST00000441756 REG3AQ06141 175 aa10.82□□□□□ -0.68
MCF2L-217ENST00000441756 FAM19A3Q7Z5A8 133 aa10.82□□□□□ -0.68
MCF2L-217ENST00000441756 NFE4Q86UQ8 179 aa10.82□□□□□ -0.68
MCF2L-217ENST00000441756 LINC00269Q8N2A0 174 aa10.82□□□□□ -0.68
MCF2L-217ENST00000441756 CHAC1Q9BUX1 264 aa10.82□□□□□ -0.68
MCF2L-217ENST00000441756 GEMIN7Q9H840 131 aaKnown RBP10.82□□□□□ -0.68
MCF2L-217ENST00000441756 KLK12Q9UKR0 248 aa10.82□□□□□ -0.68
MCF2L-217ENST00000441756 IGLV4-69A0A075B6H9 119 aa10.81□□□□□ -0.68
MCF2L-217ENST00000441756 IGKV3OR2-268A0A0C4DH90 116 aa10.81□□□□□ -0.68
MCF2L-217ENST00000441756 HSBP1L1C9JCN9 74 aa10.81□□□□□ -0.68
MCF2L-217ENST00000441756 S100A12P80511 92 aa10.81□□□□□ -0.68
MCF2L-217ENST00000441756 A0A0J9YXV3 536 aa10.8□□□□□ -0.68
MCF2L-217ENST00000441756 LINC00959A0A1B0GUT2 108 aa10.8□□□□□ -0.68
MCF2L-217ENST00000441756 Q8N3U1 123 aa10.8□□□□□ -0.68
MCF2L-217ENST00000441756 Q9H8V8 135 aa10.8□□□□□ -0.68
MCF2L-217ENST00000441756 PRR34Q9NV39 138 aa10.8□□□□□ -0.68
MCF2L-217ENST00000441756 TRAV8-4A0A0B4J246 113 aa10.79□□□□□ -0.68
MCF2L-217ENST00000441756 MIAQ16674 131 aa10.79□□□□□ -0.68
MCF2L-217ENST00000441756 CLPSL2Q6UWE3 100 aa10.79□□□□□ -0.68
MCF2L-217ENST00000441756 ATOH7Q8N100 152 aa10.79□□□□□ -0.68
MCF2L-217ENST00000441756 VAMP8Q9BV40 100 aa10.79□□□□□ -0.68
MCF2L-217ENST00000441756 C11orf86A6NJI1 115 aa10.78□□□□□ -0.68
MCF2L-217ENST00000441756 H3BRM9 83 aa10.78□□□□□ -0.68
MCF2L-217ENST00000441756 HERVK_113P61574 105 aa10.78□□□□□ -0.68
MCF2L-217ENST00000441756 TTC32Q5I0X7 151 aa10.78□□□□□ -0.68
MCF2L-217ENST00000441756 CASC10Q5T4H9 136 aa10.78□□□□□ -0.68
MCF2L-217ENST00000441756 TMEM170BQ5T4T1 132 aa10.78□□□□□ -0.68
MCF2L-217ENST00000441756 LINC00242Q5T6M2 205 aa10.78□□□□□ -0.68
MCF2L-217ENST00000441756 UBE2WQ96B02 151 aa10.78□□□□□ -0.68
MCF2L-217ENST00000441756 LINC00469Q8N7U9 141 aa10.77□□□□□ -0.69
MCF2L-217ENST00000441756 TRAV8-3A0A0A6YYJ7 113 aa10.76□□□□□ -0.69
MCF2L-217ENST00000441756 ZNF22P17026 224 aaPredicted RBP10.76□□□□□ -0.69
MCF2L-217ENST00000441756 RMI2Q96E14 147 aa10.76□□□□□ -0.69
MCF2L-217ENST00000441756 C12orf57Q99622 126 aa10.76□□□□□ -0.69
MCF2L-217ENST00000441756 IGLV5-45A0A087WSX0 123 aa10.75□□□□□ -0.69
MCF2L-217ENST00000441756 IBA57-AS1B1ANH7 110 aa10.75□□□□□ -0.69
MCF2L-217ENST00000441756 ENHOQ6UWT2 76 aa10.75□□□□□ -0.69
MCF2L-217ENST00000441756 CD164L2Q6UWJ8 174 aa10.74□□□□□ -0.69
MCF2L-217ENST00000441756 CHCHD10Q8WYQ3 142 aaPredicted RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms