RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 A4D1N5 150 aa10.32□□□□□ -0.76
LIMD1-202ENST00000440097 J3QQQ9 107 aa10.31□□□□□ -0.76
LIMD1-202ENST00000440097 RHODO00212 210 aa10.31□□□□□ -0.76
LIMD1-202ENST00000440097 NDUFA7O95182 113 aa10.31□□□□□ -0.76
LIMD1-202ENST00000440097 TRAV4A0A0B4J268 109 aa10.31□□□□□ -0.76
LIMD1-202ENST00000440097 SDHAF1A6NFY7 115 aa10.31□□□□□ -0.76
LIMD1-202ENST00000440097 COL6A5A8TX70 2615 aa10.31□□□□□ -0.76
LIMD1-202ENST00000440097 CRLF1O75462 422 aa10.31□□□□□ -0.76
LIMD1-202ENST00000440097 PF4P02776 101 aa10.31□□□□□ -0.76
LIMD1-202ENST00000440097 GAGE2BQ13066 116 aa10.31□□□□□ -0.76
LIMD1-202ENST00000440097 GAGE2EQ4V326 116 aa10.31□□□□□ -0.76
LIMD1-202ENST00000440097 GAGE2DQ9UEU5 116 aa10.31□□□□□ -0.76
LIMD1-202ENST00000440097 SNCGO76070 127 aa10.31□□□□□ -0.76
LIMD1-202ENST00000440097 IGHV3-33P01772 117 aa10.31□□□□□ -0.76
LIMD1-202ENST00000440097 LGALS3P17931 250 aaKnown RBP10.31□□□□□ -0.76
LIMD1-202ENST00000440097 ZNF415Q09FC8 603 aa10.3□□□□□ -0.76
LIMD1-202ENST00000440097 NTN5Q8WTR8 489 aaPredicted RBP10.3□□□□□ -0.76
LIMD1-202ENST00000440097 A8MTW9 85 aa10.3□□□□□ -0.76
LIMD1-202ENST00000440097 NDUFV3P56181 108 aaKnown RBP10.3□□□□□ -0.76
LIMD1-202ENST00000440097 TMEM263Q8WUH6 116 aaKnown RBP10.3□□□□□ -0.76
LIMD1-202ENST00000440097 TMEM141Q96I45 108 aa10.3□□□□□ -0.76
LIMD1-202ENST00000440097 WFDC10AQ9H1F0 79 aa10.29□□□□□ -0.76
LIMD1-202ENST00000440097 VCYO14598 125 aa10.29□□□□□ -0.76
LIMD1-202ENST00000440097 POM121L12Q8N7R1 296 aa10.29□□□□□ -0.76
LIMD1-202ENST00000440097 M0QXV9 152 aa10.28□□□□□ -0.76
LIMD1-202ENST00000440097 POLR2KP53803 58 aaKnown RBP10.28□□□□□ -0.76
LIMD1-202ENST00000440097 ADARB2-AS1A8MUL3 147 aa10.28□□□□□ -0.76
LIMD1-202ENST00000440097 M0QY20 66 aa10.28□□□□□ -0.76
LIMD1-202ENST00000440097 M0R2P5 195 aa10.28□□□□□ -0.76
LIMD1-202ENST00000440097 TIMM17AQ99595 171 aa10.28□□□□□ -0.76
LIMD1-202ENST00000440097 CCDC179H3BU77 68 aa10.27□□□□□ -0.76
LIMD1-202ENST00000440097 MUSTN1Q8IVN3 82 aa10.27□□□□□ -0.76
LIMD1-202ENST00000440097 RPL32P62910 135 aaKnown RBP10.27□□□□□ -0.77
LIMD1-202ENST00000440097 Q1RN00 199 aa10.27□□□□□ -0.77
LIMD1-202ENST00000440097 IGHV3-64A0A075B6Q5 118 aa10.26□□□□□ -0.77
LIMD1-202ENST00000440097 P0DMU3 169 aa10.26□□□□□ -0.77
LIMD1-202ENST00000440097 FAM231AP0DMU4 169 aa10.26□□□□□ -0.77
LIMD1-202ENST00000440097 FAM231CP0DMU5 169 aa10.26□□□□□ -0.77
LIMD1-202ENST00000440097 RPL35AP18077 110 aaKnown RBP10.26□□□□□ -0.77
LIMD1-202ENST00000440097 TTC32Q5I0X7 151 aa10.26□□□□□ -0.77
LIMD1-202ENST00000440097 OPRPNQ99935 248 aaPredicted RBP10.26□□□□□ -0.77
LIMD1-202ENST00000440097 TEX49A0A1B0GTD5 131 aa10.26□□□□□ -0.77
LIMD1-202ENST00000440097 IGLV1-51P01701 117 aa10.26□□□□□ -0.77
LIMD1-202ENST00000440097 KRTAP10-3P60369 221 aa10.26□□□□□ -0.77
LIMD1-202ENST00000440097 LINC01620Q4KN68 170 aa10.26□□□□□ -0.77
LIMD1-202ENST00000440097 FBN1P35555 2871 aaKnown RBP10.26□□□□□ -0.77
LIMD1-202ENST00000440097 A0A0B4J2C4 111 aa10.26□□□□□ -0.77
LIMD1-202ENST00000440097 GAGE12JA6NER3 117 aa10.26□□□□□ -0.77
LIMD1-202ENST00000440097 GAGE7O76087 117 aa10.26□□□□□ -0.77
LIMD1-202ENST00000440097 GAGE12FP0CL80 117 aa10.26□□□□□ -0.77
LIMD1-202ENST00000440097 GAGE12GP0CL81 117 aa10.26□□□□□ -0.77
LIMD1-202ENST00000440097 GAGE12IP0CL82 117 aa10.26□□□□□ -0.77
LIMD1-202ENST00000440097 IFITM1P13164 125 aa10.26□□□□□ -0.77
LIMD1-202ENST00000440097 GAGE4Q13068 117 aa10.26□□□□□ -0.77
LIMD1-202ENST00000440097 ATXN8Q156A1 80 aa10.25□□□□□ -0.77
LIMD1-202ENST00000440097 LEPROTO15243 131 aa10.25□□□□□ -0.77
LIMD1-202ENST00000440097 TRAV8-4A0A0B4J246 113 aa10.24□□□□□ -0.77
LIMD1-202ENST00000440097 TMEM223A0PJW6 202 aa10.24□□□□□ -0.77
LIMD1-202ENST00000440097 TRBV27A0A0K0K1C4 114 aa10.24□□□□□ -0.77
LIMD1-202ENST00000440097 CMC4P56277 68 aaPredicted RBP10.23□□□□□ -0.77
LIMD1-202ENST00000440097 C15orf53Q8NAA6 179 aa10.23□□□□□ -0.77
LIMD1-202ENST00000440097 NACAE9PAV3 2078 aa10.23□□□□□ -0.77
LIMD1-202ENST00000440097 TRBV6-5A0A0K0K1A5 114 aa10.23□□□□□ -0.77
LIMD1-202ENST00000440097 C1orf158Q8N1D5 194 aa10.23□□□□□ -0.77
LIMD1-202ENST00000440097 C11orf72Q8NBR9 251 aa10.23□□□□□ -0.77
LIMD1-202ENST00000440097 TNFRSF18Q9Y5U5 241 aa10.23□□□□□ -0.77
LIMD1-202ENST00000440097 TRGV1A0A0A0MS02 117 aa10.22□□□□□ -0.77
LIMD1-202ENST00000440097 NBEAL2Q6ZNJ1 2754 aa10.22□□□□□ -0.77
LIMD1-202ENST00000440097 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.22□□□□□ -0.77
LIMD1-202ENST00000440097 TRIAP1O43715 76 aa10.22□□□□□ -0.77
LIMD1-202ENST00000440097 SPXQ9BT56 116 aa10.22□□□□□ -0.77
LIMD1-202ENST00000440097 TRBV10-2A0A0K0K1G8 114 aa10.21□□□□□ -0.77
LIMD1-202ENST00000440097 ZNF22P17026 224 aaPredicted RBP10.21□□□□□ -0.77
LIMD1-202ENST00000440097 RPL13AP40429 203 aaKnown RBP10.21□□□□□ -0.77
LIMD1-202ENST00000440097 Q6Q795 121 aa10.21□□□□□ -0.77
LIMD1-202ENST00000440097 I3L3M4 83 aa10.21□□□□□ -0.78
LIMD1-202ENST00000440097 UBE2WQ96B02 151 aa10.21□□□□□ -0.78
LIMD1-202ENST00000440097 A0A0J9YXV3 536 aa10.2□□□□□ -0.78
LIMD1-202ENST00000440097 A0A0J9YXY3 114 aa10.2□□□□□ -0.78
LIMD1-202ENST00000440097 Q9UF83 564 aa10.2□□□□□ -0.78
LIMD1-202ENST00000440097 TRBV30A0A0K0K1B3 111 aa10.19□□□□□ -0.78
LIMD1-202ENST00000440097 IGHV3-53P01767 116 aa10.19□□□□□ -0.78
LIMD1-202ENST00000440097 BEAN1Q3B7T3 259 aa10.19□□□□□ -0.78
LIMD1-202ENST00000440097 LINC00482Q8N8I6 264 aa10.19□□□□□ -0.78
LIMD1-202ENST00000440097 LINC00467Q9BRT7 94 aa10.19□□□□□ -0.78
LIMD1-202ENST00000440097 PKD1L1Q8TDX9 2849 aa10.19□□□□□ -0.78
LIMD1-202ENST00000440097 C2orf82Q6UX34 121 aa10.19□□□□□ -0.78
LIMD1-202ENST00000440097 Q6ZSN1 163 aa10.19□□□□□ -0.78
LIMD1-202ENST00000440097 LINC01600Q96MT4 127 aa10.19□□□□□ -0.78
LIMD1-202ENST00000440097 SMIM20Q8N5G0 67 aa10.18□□□□□ -0.78
LIMD1-202ENST00000440097 NOP10Q9NPE3 64 aaKnown RBP10.18□□□□□ -0.78
LIMD1-202ENST00000440097 C19orf73Q9NVV2 129 aa10.17□□□□□ -0.78
LIMD1-202ENST00000440097 H7C423 109 aa10.17□□□□□ -0.78
LIMD1-202ENST00000440097 HERV-K104P63124 156 aa10.17□□□□□ -0.78
LIMD1-202ENST00000440097 RHOHQ15669 191 aa10.17□□□□□ -0.78
LIMD1-202ENST00000440097 PIK3CD-AS1Q5SR53 167 aa10.17□□□□□ -0.78
LIMD1-202ENST00000440097 Q6ZTI0 123 aa10.17□□□□□ -0.78
LIMD1-202ENST00000440097 NOTCH1P46531 2555 aa10.16□□□□□ -0.78
LIMD1-202ENST00000440097 IGHV3-38A0A0C4DH36 116 aa10.16□□□□□ -0.78
LIMD1-202ENST00000440097 PRSS2P07478 247 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms