RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 STHQ8IWL8 128 aa9.77□□□□□ -0.84
HERPUD1-204ENST00000439977 PPDPFLQ8WWR9 84 aa9.77□□□□□ -0.84
HERPUD1-204ENST00000439977 TRIAP1O43715 76 aa9.77□□□□□ -0.85
HERPUD1-204ENST00000439977 XGP55808 180 aa9.76□□□□□ -0.85
HERPUD1-204ENST00000439977 TRAV13-1A0A0B4J241 112 aa9.76□□□□□ -0.85
HERPUD1-204ENST00000439977 A0A0B4J2C4 111 aa9.76□□□□□ -0.85
HERPUD1-204ENST00000439977 Q6ZTI0 123 aa9.76□□□□□ -0.85
HERPUD1-204ENST00000439977 C1orf158Q8N1D5 194 aa9.76□□□□□ -0.85
HERPUD1-204ENST00000439977 ATP6V0E2Q8NHE4 81 aa9.76□□□□□ -0.85
HERPUD1-204ENST00000439977 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.76□□□□□ -0.85
HERPUD1-204ENST00000439977 TINCRA0A1B0GVN0 87 aa9.76□□□□□ -0.85
HERPUD1-204ENST00000439977 WFDC11Q8NEX6 87 aa9.76□□□□□ -0.85
HERPUD1-204ENST00000439977 WFDC10AQ9H1F0 79 aa9.76□□□□□ -0.85
HERPUD1-204ENST00000439977 SPANXA1Q9NS26 97 aa9.76□□□□□ -0.85
HERPUD1-204ENST00000439977 A8MTW9 85 aa9.75□□□□□ -0.85
HERPUD1-204ENST00000439977 Q8N2B8 174 aa9.75□□□□□ -0.85
HERPUD1-204ENST00000439977 ZNF843Q8N446 348 aa9.75□□□□□ -0.85
HERPUD1-204ENST00000439977 EDA2RQ9HAV5 297 aa9.75□□□□□ -0.85
HERPUD1-204ENST00000439977 PLA2G2AP14555 144 aa9.74□□□□□ -0.85
HERPUD1-204ENST00000439977 NTN5Q8WTR8 489 aaPredicted RBP9.74□□□□□ -0.85
HERPUD1-204ENST00000439977 FN1P02751 2386 aaKnown RBP9.73□□□□□ -0.85
HERPUD1-204ENST00000439977 GAGE12JA6NER3 117 aa9.73□□□□□ -0.85
HERPUD1-204ENST00000439977 GAGE4Q13068 117 aa9.73□□□□□ -0.85
HERPUD1-204ENST00000439977 GAGE5Q13069 117 aa9.73□□□□□ -0.85
HERPUD1-204ENST00000439977 CLEC2BQ92478 149 aa9.73□□□□□ -0.85
HERPUD1-204ENST00000439977 TMEM101Q96IK0 257 aa9.73□□□□□ -0.85
HERPUD1-204ENST00000439977 NBEAL2Q6ZNJ1 2754 aa9.73□□□□□ -0.85
HERPUD1-204ENST00000439977 TEX49A0A1B0GTD5 131 aa9.73□□□□□ -0.85
HERPUD1-204ENST00000439977 RS1O15537 224 aa9.73□□□□□ -0.85
HERPUD1-204ENST00000439977 SBSPONQ8IVN8 264 aa9.73□□□□□ -0.85
HERPUD1-204ENST00000439977 BEAN1Q3B7T3 259 aa9.72□□□□□ -0.85
HERPUD1-204ENST00000439977 DNAJC9-AS1A6NH13 148 aa9.72□□□□□ -0.85
HERPUD1-204ENST00000439977 CCL24O00175 119 aa9.72□□□□□ -0.85
HERPUD1-204ENST00000439977 MIAQ16674 131 aa9.72□□□□□ -0.85
HERPUD1-204ENST00000439977 LINC01620Q4KN68 170 aa9.72□□□□□ -0.85
HERPUD1-204ENST00000439977 CITED2Q99967 270 aaPredicted RBP9.72□□□□□ -0.85
HERPUD1-204ENST00000439977 NOP10Q9NPE3 64 aaKnown RBP9.72□□□□□ -0.85
HERPUD1-204ENST00000439977 ESM1Q9NQ30 184 aa9.72□□□□□ -0.85
HERPUD1-204ENST00000439977 Q9H8V8 135 aa9.72□□□□□ -0.85
HERPUD1-204ENST00000439977 ATXN8Q156A1 80 aa9.71□□□□□ -0.85
HERPUD1-204ENST00000439977 NTM-AS1Q6ZSK4 140 aa9.71□□□□□ -0.85
HERPUD1-204ENST00000439977 KRTAP1-3Q8IUG1 177 aa9.71□□□□□ -0.85
HERPUD1-204ENST00000439977 ICOSQ9Y6W8 199 aa9.71□□□□□ -0.85
HERPUD1-204ENST00000439977 TENM4Q6N022 2769 aa9.71□□□□□ -0.86
HERPUD1-204ENST00000439977 RPL35AP18077 110 aaKnown RBP9.71□□□□□ -0.86
HERPUD1-204ENST00000439977 LINC00242Q5T6M2 205 aa9.71□□□□□ -0.86
HERPUD1-204ENST00000439977 ZFAND6Q6FIF0 208 aa9.71□□□□□ -0.86
HERPUD1-204ENST00000439977 ITPR2Q14571 2701 aa9.7□□□□□ -0.86
HERPUD1-204ENST00000439977 IGKV3OR2-268A0A0C4DH90 116 aa9.7□□□□□ -0.86
HERPUD1-204ENST00000439977 SCGB1A1P11684 91 aa9.7□□□□□ -0.86
HERPUD1-204ENST00000439977 CRYBA4P53673 196 aa9.7□□□□□ -0.86
HERPUD1-204ENST00000439977 CKS1BP61024 79 aa9.7□□□□□ -0.86
HERPUD1-204ENST00000439977 LOC100131303A0A0U1RQF7 123 aa9.7□□□□□ -0.86
HERPUD1-204ENST00000439977 CIDEAO60543 219 aa9.7□□□□□ -0.86
HERPUD1-204ENST00000439977 DNAJC30Q96LL9 226 aa9.69□□□□□ -0.86
HERPUD1-204ENST00000439977 RPL13AP40429 203 aaKnown RBP9.69□□□□□ -0.86
HERPUD1-204ENST00000439977 GAGE7O76087 117 aa9.69□□□□□ -0.86
HERPUD1-204ENST00000439977 GAGE12FP0CL80 117 aa9.69□□□□□ -0.86
HERPUD1-204ENST00000439977 GAGE12GP0CL81 117 aa9.69□□□□□ -0.86
HERPUD1-204ENST00000439977 GAGE12IP0CL82 117 aa9.69□□□□□ -0.86
HERPUD1-204ENST00000439977 PIK3CD-AS1Q5SR53 167 aa9.69□□□□□ -0.86
HERPUD1-204ENST00000439977 SPANXDQ9BXN6 97 aa9.69□□□□□ -0.86
HERPUD1-204ENST00000439977 SPANXCQ9NY87 97 aa9.69□□□□□ -0.86
HERPUD1-204ENST00000439977 TRBV30A0A0K0K1B3 111 aa9.68□□□□□ -0.86
HERPUD1-204ENST00000439977 RPL36AP83881 106 aaKnown RBP9.68□□□□□ -0.86
HERPUD1-204ENST00000439977 RPL36ALQ969Q0 106 aaKnown RBP9.68□□□□□ -0.86
HERPUD1-204ENST00000439977 K7EQD1 137 aa9.67□□□□□ -0.86
HERPUD1-204ENST00000439977 C2orf82Q6UX34 121 aa9.67□□□□□ -0.86
HERPUD1-204ENST00000439977 TRGV2A0A075B6R0 118 aa9.66□□□□□ -0.86
HERPUD1-204ENST00000439977 A0A1B0GV72 72 aa9.66□□□□□ -0.86
HERPUD1-204ENST00000439977 H7C423 109 aa9.66□□□□□ -0.86
HERPUD1-204ENST00000439977 GCN1Q92616 2671 aaKnown RBP9.66□□□□□ -0.86
HERPUD1-204ENST00000439977 NOTCH2Q04721 2471 aa9.66□□□□□ -0.86
HERPUD1-204ENST00000439977 NDUFA1O15239 70 aa9.66□□□□□ -0.86
HERPUD1-204ENST00000439977 MEIG1Q5JSS6 88 aa9.66□□□□□ -0.86
HERPUD1-204ENST00000439977 PRIMA1Q86XR5 153 aa9.66□□□□□ -0.86
HERPUD1-204ENST00000439977 TRBV10-2A0A0K0K1G8 114 aa9.65□□□□□ -0.86
HERPUD1-204ENST00000439977 SMIM1B2RUZ4 78 aa9.65□□□□□ -0.86
HERPUD1-204ENST00000439977 COX6CP09669 75 aa9.65□□□□□ -0.86
HERPUD1-204ENST00000439977 TIRAPP58753 221 aa9.65□□□□□ -0.86
HERPUD1-204ENST00000439977 GIG44P09565 113 aaPredicted RBP9.65□□□□□ -0.87
HERPUD1-204ENST00000439977 HERVK_113P63121 156 aa9.65□□□□□ -0.87
HERPUD1-204ENST00000439977 CIRBPQ14011 172 aaKnown RBP9.65□□□□□ -0.87
HERPUD1-204ENST00000439977 CRLF1O75462 422 aa9.64□□□□□ -0.87
HERPUD1-204ENST00000439977 SOSTDC1Q6X4U4 206 aa9.64□□□□□ -0.87
HERPUD1-204ENST00000439977 LINC00308Q8TCZ7 52 aa9.64□□□□□ -0.87
HERPUD1-204ENST00000439977 IGLV5-45A0A087WSX0 123 aa9.63□□□□□ -0.87
HERPUD1-204ENST00000439977 YAE1D1Q9NRH1 226 aa9.63□□□□□ -0.87
HERPUD1-204ENST00000439977 LRRC75A-AS1Q8N1F1 130 aa9.63□□□□□ -0.87
HERPUD1-204ENST00000439977 CDC42SE2Q9NRR3 84 aa9.63□□□□□ -0.87
HERPUD1-204ENST00000439977 UBE2L6O14933 153 aa9.62□□□□□ -0.87
HERPUD1-204ENST00000439977 LINC01006Q8NI28 216 aa9.62□□□□□ -0.87
HERPUD1-204ENST00000439977 IL17DQ8TAD2 202 aa9.62□□□□□ -0.87
HERPUD1-204ENST00000439977 TOMM7Q9P0U1 55 aa9.62□□□□□ -0.87
HERPUD1-204ENST00000439977 GAGE6Q13070 117 aa9.62□□□□□ -0.87
HERPUD1-204ENST00000439977 TRAV4A0A0B4J268 109 aa9.62□□□□□ -0.87
HERPUD1-204ENST00000439977 IGLV5-39A0A0G2JS06 123 aa9.62□□□□□ -0.87
HERPUD1-204ENST00000439977 DAZ2Q13117 558 aaKnown RBP9.62□□□□□ -0.87
HERPUD1-204ENST00000439977 DAZ4Q86SG3 579 aaKnown RBP9.62□□□□□ -0.87
HERPUD1-204ENST00000439977 UBE2WQ96B02 151 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms