RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 OR2T8A6NH00 312 aa0.68□□□□□ -2.3
VPS41-207ENST00000439468 C17orf112F2Z3M2 114 aa0.68□□□□□ -2.3
VPS41-207ENST00000439468 AIPO00170 330 aa0.68□□□□□ -2.3
VPS41-207ENST00000439468 MRPL33O75394 65 aaKnown RBP0.68□□□□□ -2.3
VPS41-207ENST00000439468 MT1FP04733 61 aa0.68□□□□□ -2.3
VPS41-207ENST00000439468 OR10J4P0C629 311 aa0.68□□□□□ -2.3
VPS41-207ENST00000439468 OGNP20774 298 aaKnown RBP0.68□□□□□ -2.3
VPS41-207ENST00000439468 SDC4P31431 198 aa0.68□□□□□ -2.3
VPS41-207ENST00000439468 RAB5CP51148 216 aa0.68□□□□□ -2.3
VPS41-207ENST00000439468 LTC4SQ16873 150 aa0.68□□□□□ -2.3
VPS41-207ENST00000439468 OR4C12Q96R67 309 aa0.68□□□□□ -2.3
VPS41-207ENST00000439468 RNF11Q9Y3C5 154 aa0.68□□□□□ -2.3
VPS41-207ENST00000439468 UFC1Q9Y3C8 167 aa0.68□□□□□ -2.3
VPS41-207ENST00000439468 H3BRM9 83 aa0.67□□□□□ -2.3
VPS41-207ENST00000439468 RER1O15258 196 aa0.67□□□□□ -2.3
VPS41-207ENST00000439468 APOA2P02652 100 aa0.67□□□□□ -2.3
VPS41-207ENST00000439468 MT2AP02795 61 aa0.67□□□□□ -2.3
VPS41-207ENST00000439468 SCGB2B2Q4G0G5 96 aa0.67□□□□□ -2.3
VPS41-207ENST00000439468 NCBP2-AS2Q69YL0 99 aa0.67□□□□□ -2.3
VPS41-207ENST00000439468 TMED4Q7Z7H5 227 aa0.67□□□□□ -2.3
VPS41-207ENST00000439468 TEN1Q86WV5 123 aa0.67□□□□□ -2.3
VPS41-207ENST00000439468 CARD19Q96LW7 228 aa0.67□□□□□ -2.3
VPS41-207ENST00000439468 HYLS1Q96M11 299 aa0.67□□□□□ -2.3
VPS41-207ENST00000439468 CACYBPQ9HB71 228 aaKnown RBP0.67□□□□□ -2.3
VPS41-207ENST00000439468 TMEM138Q9NPI0 162 aa0.67□□□□□ -2.3
VPS41-207ENST00000439468 OR52A1Q9UKL2 312 aa0.67□□□□□ -2.3
VPS41-207ENST00000439468 A0A087WSZ3 146 aa0.66□□□□□ -2.3
VPS41-207ENST00000439468 M0R1W7 72 aa0.66□□□□□ -2.3
VPS41-207ENST00000439468 M0R2T5 61 aa0.66□□□□□ -2.3
VPS41-207ENST00000439468 PPYP01298 95 aa0.66□□□□□ -2.3
VPS41-207ENST00000439468 TFF1P04155 84 aa0.66□□□□□ -2.3
VPS41-207ENST00000439468 MT4P47944 62 aa0.66□□□□□ -2.3
VPS41-207ENST00000439468 GNG10P50151 68 aa0.66□□□□□ -2.3
VPS41-207ENST00000439468 CRYBA4P53673 196 aa0.66□□□□□ -2.3
VPS41-207ENST00000439468 ASB16-AS1Q495Z4 193 aa0.66□□□□□ -2.3
VPS41-207ENST00000439468 C1orf140Q5VVS0 124 aa0.66□□□□□ -2.3
VPS41-207ENST00000439468 HAGHLQ6PII5 290 aaPredicted RBP0.66□□□□□ -2.3
VPS41-207ENST00000439468 ARPINQ7Z6K5 226 aa0.66□□□□□ -2.3
VPS41-207ENST00000439468 OR5AS1Q8N127 324 aa0.66□□□□□ -2.3
VPS41-207ENST00000439468 C5orf56Q8N8D9 126 aa0.66□□□□□ -2.3
VPS41-207ENST00000439468 SPRR2FQ96RM1 72 aa0.66□□□□□ -2.3
VPS41-207ENST00000439468 KAAG1Q9UBP8 84 aa0.66□□□□□ -2.3
VPS41-207ENST00000439468 TNFSF18Q9UNG2 199 aa0.66□□□□□ -2.3
VPS41-207ENST00000439468 hDV103S1A0JD37 113 aa0.65□□□□□ -2.31
VPS41-207ENST00000439468 HIST1H2BKO60814 126 aa0.65□□□□□ -2.31
VPS41-207ENST00000439468 GYPAP02724 150 aa0.65□□□□□ -2.31
VPS41-207ENST00000439468 HIST1H2BJP06899 126 aa0.65□□□□□ -2.31
VPS41-207ENST00000439468 IDO1P14902 403 aa0.65□□□□□ -2.31
VPS41-207ENST00000439468 COX7CP15954 63 aa0.65□□□□□ -2.31
VPS41-207ENST00000439468 RPL22P35268 128 aaKnown RBP0.65□□□□□ -2.31
VPS41-207ENST00000439468 POU6F1Q14863 301 aa0.65□□□□□ -2.31
VPS41-207ENST00000439468 LRRC18Q8N456 261 aa0.65□□□□□ -2.31
VPS41-207ENST00000439468 FAM216BQ8N7L0 139 aa0.65□□□□□ -2.31
VPS41-207ENST00000439468 TMEM35BQ8NCS4 154 aa0.65□□□□□ -2.31
VPS41-207ENST00000439468 NEK7Q8TDX7 302 aa0.65□□□□□ -2.31
VPS41-207ENST00000439468 SKA2Q8WVK7 121 aaPredicted RBP0.65□□□□□ -2.31
VPS41-207ENST00000439468 MALSU1Q96EH3 234 aa0.65□□□□□ -2.31
VPS41-207ENST00000439468 MCEEQ96PE7 176 aa0.65□□□□□ -2.31
VPS41-207ENST00000439468 LINC00470Q9BZP3 86 aa0.65□□□□□ -2.31
VPS41-207ENST00000439468 MAP1LC3BQ9GZQ8 125 aa0.65□□□□□ -2.31
VPS41-207ENST00000439468 TAF9BQ9HBM6 251 aa0.65□□□□□ -2.31
VPS41-207ENST00000439468 HILPDAQ9Y5L2 63 aa0.65□□□□□ -2.31
VPS41-207ENST00000439468 HBBP68871 147 aa0.64□□□□□ -2.31
VPS41-207ENST00000439468 WFDC2Q14508 124 aa0.64□□□□□ -2.31
VPS41-207ENST00000439468 C3orf33Q6P1S2 294 aa0.64□□□□□ -2.31
VPS41-207ENST00000439468 C10orf111Q8N326 155 aa0.64□□□□□ -2.31
VPS41-207ENST00000439468 PRRT1Q99946 306 aa0.64□□□□□ -2.31
VPS41-207ENST00000439468 WFDC6Q9BQY6 131 aa0.64□□□□□ -2.31
VPS41-207ENST00000439468 PCBD2Q9H0N5 130 aa0.64□□□□□ -2.31
VPS41-207ENST00000439468 DPH3P1Q9H4G8 78 aa0.64□□□□□ -2.31
VPS41-207ENST00000439468 OTORQ9NRC9 128 aa0.64□□□□□ -2.31
VPS41-207ENST00000439468 TRAV23DV6A0A075B6W5 121 aa0.63□□□□□ -2.31
VPS41-207ENST00000439468 TRAV27A0A087WT01 109 aa0.63□□□□□ -2.31
VPS41-207ENST00000439468 A0A1B0GW64 132 aa0.63□□□□□ -2.31
VPS41-207ENST00000439468 PVALEFA0A1B0GWK0 134 aa0.63□□□□□ -2.31
VPS41-207ENST00000439468 M0QZK8 103 aa0.63□□□□□ -2.31
VPS41-207ENST00000439468 CCL3L1P16619 93 aa0.63□□□□□ -2.31
VPS41-207ENST00000439468 SERPINB1P30740 379 aa0.63□□□□□ -2.31
VPS41-207ENST00000439468 DEFB114Q30KQ6 69 aa0.63□□□□□ -2.31
VPS41-207ENST00000439468 ANGPTL5Q86XS5 388 aa0.63□□□□□ -2.31
VPS41-207ENST00000439468 STX19Q8N4C7 294 aa0.63□□□□□ -2.31
VPS41-207ENST00000439468 DYDC1Q8WWB3 177 aa0.63□□□□□ -2.31
VPS41-207ENST00000439468 PLEKHB2Q96CS7 222 aa0.63□□□□□ -2.31
VPS41-207ENST00000439468 BORCS8Q96FH0 119 aa0.63□□□□□ -2.31
VPS41-207ENST00000439468 LIMD2Q9BT23 127 aa0.63□□□□□ -2.31
VPS41-207ENST00000439468 C19orf12Q9NSK7 152 aa0.63□□□□□ -2.31
VPS41-207ENST00000439468 G3V318 75 aa0.62□□□□□ -2.31
VPS41-207ENST00000439468 JMJD7-PLA2G4BH0Y9G9 81 aa0.62□□□□□ -2.31
VPS41-207ENST00000439468 NDUFA2O43678 99 aa0.62□□□□□ -2.31
VPS41-207ENST00000439468 MT-ND6P03923 174 aa0.62□□□□□ -2.31
VPS41-207ENST00000439468 CD14P08571 375 aa0.62□□□□□ -2.31
VPS41-207ENST00000439468 RPS3P23396 243 aaKnown RBP eCLIP0.62□□□□□ -2.31
VPS41-207ENST00000439468 OR8B8Q15620 311 aa0.62□□□□□ -2.31
VPS41-207ENST00000439468 RTL8BQ17RB0 113 aa0.62□□□□□ -2.31
VPS41-207ENST00000439468 MINOS1Q5TGZ0 78 aa0.62□□□□□ -2.31
VPS41-207ENST00000439468 FAM24BQ8N5W8 94 aa0.62□□□□□ -2.31
VPS41-207ENST00000439468 ZNF431Q8TF32 576 aaPredicted RBP0.62□□□□□ -2.31
VPS41-207ENST00000439468 GAFA1Q96PS6 74 aa0.62□□□□□ -2.31
VPS41-207ENST00000439468 AIF1LQ9BQI0 150 aa0.62□□□□□ -2.31
VPS41-207ENST00000439468 RTL8AQ9BWD3 113 aa0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms