RNA–Protein interactions for RNA: ENST00000439176.5

ERCC8-203, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 5

Gene ERCC8, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-203ENST00000439176 ZNF25P17030 456 aaPredicted RBP4.33□□□□□ -1.72
ERCC8-203ENST00000439176 PMCHP20382 165 aa4.33□□□□□ -1.72
ERCC8-203ENST00000439176 GATD1Q8NB37 220 aa4.33□□□□□ -1.72
ERCC8-203ENST00000439176 SPACA4Q8TDM5 124 aa4.33□□□□□ -1.72
ERCC8-203ENST00000439176 CHCHD10Q8WYQ3 142 aaPredicted RBP4.33□□□□□ -1.72
ERCC8-203ENST00000439176 RNASE7Q9H1E1 156 aaKnown RBP4.33□□□□□ -1.72
ERCC8-203ENST00000439176 LINC00474Q9P2X8 69 aa4.33□□□□□ -1.72
ERCC8-203ENST00000439176 TRAV26-2A0A0B4J265 109 aa4.32□□□□□ -1.72
ERCC8-203ENST00000439176 SDHAF1A6NFY7 115 aa4.32□□□□□ -1.72
ERCC8-203ENST00000439176 PANO1I0J062 215 aa4.32□□□□□ -1.72
ERCC8-203ENST00000439176 GATCO43716 136 aaKnown RBP4.32□□□□□ -1.72
ERCC8-203ENST00000439176 FGF6P10767 208 aa4.32□□□□□ -1.72
ERCC8-203ENST00000439176 COX6A2Q02221 97 aa4.32□□□□□ -1.72
ERCC8-203ENST00000439176 SMAGPQ0VAQ4 97 aa4.32□□□□□ -1.72
ERCC8-203ENST00000439176 MAJINQ3KP22 176 aa4.32□□□□□ -1.72
ERCC8-203ENST00000439176 OCC1Q8TAD7 63 aa4.32□□□□□ -1.72
ERCC8-203ENST00000439176 GTSF1Q8WW33 167 aa4.32□□□□□ -1.72
ERCC8-203ENST00000439176 GFRA4Q9GZZ7 299 aa4.32□□□□□ -1.72
ERCC8-203ENST00000439176 PLAC8Q9NZF1 115 aa4.32□□□□□ -1.72
ERCC8-203ENST00000439176 FAT3Q8TDW7 4589 aa4.32□□□□□ -1.72
ERCC8-203ENST00000439176 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.31□□□□□ -1.72
ERCC8-203ENST00000439176 GVQW2A0A096LPI5 108 aaPredicted RBP4.31□□□□□ -1.72
ERCC8-203ENST00000439176 IGKV2-24A0A0C4DH68 120 aa4.31□□□□□ -1.72
ERCC8-203ENST00000439176 IGKV2-29A2NJV5 120 aaPredicted RBP4.31□□□□□ -1.72
ERCC8-203ENST00000439176 TMEM250H0YL14 139 aa4.31□□□□□ -1.72
ERCC8-203ENST00000439176 TNFRSF6BO95407 300 aa4.31□□□□□ -1.72
ERCC8-203ENST00000439176 CHTF8P0CG12 524 aa4.31□□□□□ -1.72
ERCC8-203ENST00000439176 HNRNPA3P51991 378 aaKnown RBP4.31□□□□□ -1.72
ERCC8-203ENST00000439176 BLOC1S1P78537 153 aa4.31□□□□□ -1.72
ERCC8-203ENST00000439176 SS18Q15532 418 aa4.31□□□□□ -1.72
ERCC8-203ENST00000439176 HIGD2BQ4VC39 106 aa4.31□□□□□ -1.72
ERCC8-203ENST00000439176 Q6ZNX1 250 aa4.31□□□□□ -1.72
ERCC8-203ENST00000439176 TCTE3Q8IZS6 198 aa4.31□□□□□ -1.72
ERCC8-203ENST00000439176 C15orf56Q8N910 161 aa4.31□□□□□ -1.72
ERCC8-203ENST00000439176 OR5A1Q8NGJ0 315 aa4.31□□□□□ -1.72
ERCC8-203ENST00000439176 RPL39LQ96EH5 51 aaKnown RBP4.31□□□□□ -1.72
ERCC8-203ENST00000439176 MRAP2Q96G30 205 aa4.31□□□□□ -1.72
ERCC8-203ENST00000439176 ST20Q9HBF5 79 aa4.31□□□□□ -1.72
ERCC8-203ENST00000439176 HMCN2Q8NDA2 5059 aa4.31□□□□□ -1.72
ERCC8-203ENST00000439176 IGHV1-58A0A0C4DH39 117 aa4.3□□□□□ -1.72
ERCC8-203ENST00000439176 K7EN84 100 aa4.3□□□□□ -1.72
ERCC8-203ENST00000439176 PHOX2AO14813 284 aa4.3□□□□□ -1.72
ERCC8-203ENST00000439176 XCL1P47992 114 aa4.3□□□□□ -1.72
ERCC8-203ENST00000439176 CEBPGP53567 150 aa4.3□□□□□ -1.72
ERCC8-203ENST00000439176 FAM231DQ6ZW35 169 aa4.3□□□□□ -1.72
ERCC8-203ENST00000439176 STPG4Q8N801 248 aa4.3□□□□□ -1.72
ERCC8-203ENST00000439176 ISOC2Q96AB3 205 aa4.3□□□□□ -1.72
ERCC8-203ENST00000439176 TRBV6-5A0A0K0K1A5 114 aa4.29□□□□□ -1.72
ERCC8-203ENST00000439176 A0A1B0GUT8 65 aa4.29□□□□□ -1.72
ERCC8-203ENST00000439176 CCL25O15444 150 aa4.29□□□□□ -1.72
ERCC8-203ENST00000439176 PPP1R17O96001 155 aa4.29□□□□□ -1.72
ERCC8-203ENST00000439176 FOXA3P55318 350 aaPredicted RBP4.29□□□□□ -1.72
ERCC8-203ENST00000439176 FOXI1Q12951 378 aa4.29□□□□□ -1.72
ERCC8-203ENST00000439176 PRSS3P2Q8NHM4 247 aa4.29□□□□□ -1.72
ERCC8-203ENST00000439176 LYPD6BQ8NI32 183 aa4.29□□□□□ -1.72
ERCC8-203ENST00000439176 CARD19Q96LW7 228 aa4.29□□□□□ -1.72
ERCC8-203ENST00000439176 LINC00959A0A1B0GUT2 108 aa4.28□□□□□ -1.72
ERCC8-203ENST00000439176 C7orf77A4D0Y5 90 aa4.28□□□□□ -1.72
ERCC8-203ENST00000439176 FAM231BA6NCW3 169 aa4.28□□□□□ -1.72
ERCC8-203ENST00000439176 C1orf196B1AJZ1 125 aa4.28□□□□□ -1.72
ERCC8-203ENST00000439176 VCYO14598 125 aa4.28□□□□□ -1.72
ERCC8-203ENST00000439176 FCER1GP30273 86 aa4.28□□□□□ -1.72
ERCC8-203ENST00000439176 REG3GQ6UW15 175 aa4.28□□□□□ -1.72
ERCC8-203ENST00000439176 CD164L2Q6UWJ8 174 aa4.28□□□□□ -1.72
ERCC8-203ENST00000439176 ZNF664Q8N3J9 261 aa4.28□□□□□ -1.72
ERCC8-203ENST00000439176 TSKUQ8WUA8 353 aa4.28□□□□□ -1.72
ERCC8-203ENST00000439176 TMEM18Q96B42 140 aa4.28□□□□□ -1.72
ERCC8-203ENST00000439176 KIR2DL4Q99706 377 aa4.28□□□□□ -1.72
ERCC8-203ENST00000439176 SMIM7Q9BQ49 75 aa4.28□□□□□ -1.72
ERCC8-203ENST00000439176 EIF5A2Q9GZV4 153 aaKnown RBP4.28□□□□□ -1.72
ERCC8-203ENST00000439176 TMEM191AQ9H0A3 160 aa4.28□□□□□ -1.72
ERCC8-203ENST00000439176 PKHD1L1Q86WI1 4243 aa4.28□□□□□ -1.72
ERCC8-203ENST00000439176 UBR4Q5T4S7 5183 aa4.27□□□□□ -1.73
ERCC8-203ENST00000439176 A0A096LNI7 61 aa4.27□□□□□ -1.73
ERCC8-203ENST00000439176 TRBV27A0A0K0K1C4 114 aa4.27□□□□□ -1.73
ERCC8-203ENST00000439176 ZNF727A8MUV8 499 aa4.27□□□□□ -1.73
ERCC8-203ENST00000439176 HIGD1CA8MV81 97 aa4.27□□□□□ -1.73
ERCC8-203ENST00000439176 TSHBP01222 138 aa4.27□□□□□ -1.73
ERCC8-203ENST00000439176 MT1HL1P0DM35 61 aa4.27□□□□□ -1.73
ERCC8-203ENST00000439176 ESDP10768 282 aa4.27□□□□□ -1.73
ERCC8-203ENST00000439176 PRR3P79522 188 aaKnown RBP4.27□□□□□ -1.73
ERCC8-203ENST00000439176 SYCNQ0VAF6 134 aa4.27□□□□□ -1.73
ERCC8-203ENST00000439176 RIGQ13278 110 aa4.27□□□□□ -1.73
ERCC8-203ENST00000439176 SPINK6Q6UWN8 80 aa4.27□□□□□ -1.73
ERCC8-203ENST00000439176 ALKAL2Q6UX46 152 aa4.27□□□□□ -1.73
ERCC8-203ENST00000439176 Q6ZRP5 223 aa4.27□□□□□ -1.73
ERCC8-203ENST00000439176 MRPL52Q86TS9 123 aaKnown RBP4.27□□□□□ -1.73
ERCC8-203ENST00000439176 AKAP14Q86UN6 197 aa4.27□□□□□ -1.73
ERCC8-203ENST00000439176 CDC42SE2Q9NRR3 84 aa4.27□□□□□ -1.73
ERCC8-203ENST00000439176 TMEM242Q9NWH2 141 aa4.27□□□□□ -1.73
ERCC8-203ENST00000439176 LOC107984640A0A0U1RRK4 108 aa4.26□□□□□ -1.73
ERCC8-203ENST00000439176 COX7A2LO14548 114 aa4.26□□□□□ -1.73
ERCC8-203ENST00000439176 PPP1R2P9O14990 202 aa4.26□□□□□ -1.73
ERCC8-203ENST00000439176 APOMO95445 188 aa4.26□□□□□ -1.73
ERCC8-203ENST00000439176 RAB4AP20338 218 aa4.26□□□□□ -1.73
ERCC8-203ENST00000439176 CAMPP49913 170 aa4.26□□□□□ -1.73
ERCC8-203ENST00000439176 POLR2KP53803 58 aaKnown RBP4.26□□□□□ -1.73
ERCC8-203ENST00000439176 LINC01551Q86U37 167 aa4.26□□□□□ -1.73
ERCC8-203ENST00000439176 LINC01600Q96MT4 127 aa4.26□□□□□ -1.73
ERCC8-203ENST00000439176 OSTCQ9NRP0 149 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms