RNA–Protein interactions for RNA: ENST00000438413.5

MUC1-211, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 927 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-211ENST00000438413 MRAP2Q96G30 205 aa11.82□□□□□ -0.52
MUC1-211ENST00000438413 TSHBP01222 138 aa11.81□□□□□ -0.52
MUC1-211ENST00000438413 PTTG1IPP53801 180 aa11.81□□□□□ -0.52
MUC1-211ENST00000438413 CD164L2Q6UWJ8 174 aa11.81□□□□□ -0.52
MUC1-211ENST00000438413 TMEM242Q9NWH2 141 aa11.81□□□□□ -0.52
MUC1-211ENST00000438413 TAGLN2P37802 199 aaKnown RBP11.8□□□□□ -0.52
MUC1-211ENST00000438413 GAGE2BQ13066 116 aa11.8□□□□□ -0.52
MUC1-211ENST00000438413 CDC42SE2Q9NRR3 84 aa11.8□□□□□ -0.52
MUC1-211ENST00000438413 LOC107984640A0A0U1RRK4 108 aa11.79□□□□□ -0.52
MUC1-211ENST00000438413 CAMPP49913 170 aa11.79□□□□□ -0.52
MUC1-211ENST00000438413 ST20Q9HBF5 79 aa11.79□□□□□ -0.52
MUC1-211ENST00000438413 GATCO43716 136 aaKnown RBP11.78□□□□□ -0.52
MUC1-211ENST00000438413 GAS8-AS1O95177 125 aa11.78□□□□□ -0.52
MUC1-211ENST00000438413 MRPL52Q86TS9 123 aaKnown RBP11.78□□□□□ -0.52
MUC1-211ENST00000438413 ZNF664Q8N3J9 261 aa11.78□□□□□ -0.52
MUC1-211ENST00000438413 ISOC2Q96AB3 205 aa11.78□□□□□ -0.52
MUC1-211ENST00000438413 IGLV4-69A0A075B6H9 119 aa11.77□□□□□ -0.53
MUC1-211ENST00000438413 FAM210AQ96ND0 272 aa11.77□□□□□ -0.53
MUC1-211ENST00000438413 A0A1W2PNN7 141 aa11.76□□□□□ -0.53
MUC1-211ENST00000438413 A8MWL6 223 aa11.76□□□□□ -0.53
MUC1-211ENST00000438413 C7orf77A4D0Y5 90 aa11.75□□□□□ -0.53
MUC1-211ENST00000438413 MALP21145 153 aa11.75□□□□□ -0.53
MUC1-211ENST00000438413 POLR2KP53803 58 aaKnown RBP11.75□□□□□ -0.53
MUC1-211ENST00000438413 FAM231DQ6ZW35 169 aa11.75□□□□□ -0.53
MUC1-211ENST00000438413 BORCS7Q96B45 105 aa11.75□□□□□ -0.53
MUC1-211ENST00000438413 NUP35Q8NFH5 326 aa11.74□□□□□ -0.53
MUC1-211ENST00000438413 CAMK2N2Q96S95 79 aa11.74□□□□□ -0.53
MUC1-211ENST00000438413 PSORS1C2Q9UIG4 136 aa11.74□□□□□ -0.53
MUC1-211ENST00000438413 TRBV27A0A0K0K1C4 114 aa11.73□□□□□ -0.53
MUC1-211ENST00000438413 COX7A2LO14548 114 aa11.73□□□□□ -0.53
MUC1-211ENST00000438413 LPAP08519 4548 aa11.72□□□□□ -0.53
MUC1-211ENST00000438413 C1orf196B1AJZ1 125 aa11.72□□□□□ -0.53
MUC1-211ENST00000438413 APOMO95445 188 aa11.72□□□□□ -0.53
MUC1-211ENST00000438413 MT-ND6P03923 174 aa11.72□□□□□ -0.53
MUC1-211ENST00000438413 C9orf116Q5BN46 136 aaPredicted RBP11.72□□□□□ -0.53
MUC1-211ENST00000438413 CT83Q5H943 113 aa11.72□□□□□ -0.53
MUC1-211ENST00000438413 TMEM191AQ9H0A3 160 aa11.72□□□□□ -0.53
MUC1-211ENST00000438413 TMEM250H0YL14 139 aa11.71□□□□□ -0.53
MUC1-211ENST00000438413 RPL18AQ02543 176 aaKnown RBP11.71□□□□□ -0.53
MUC1-211ENST00000438413 SLC51BQ86UW2 128 aa11.71□□□□□ -0.53
MUC1-211ENST00000438413 A0A1B0GUT8 65 aa11.7□□□□□ -0.54
MUC1-211ENST00000438413 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.7□□□□□ -0.54
MUC1-211ENST00000438413 RAB4AP20338 218 aa11.7□□□□□ -0.54
MUC1-211ENST00000438413 RNASE13Q5GAN3 156 aaKnown RBP11.7□□□□□ -0.54
MUC1-211ENST00000438413 C1orf137Q5JT78 98 aa11.7□□□□□ -0.54
MUC1-211ENST00000438413 C2orf48Q96LS8 159 aa11.7□□□□□ -0.54
MUC1-211ENST00000438413 HIGD1CA8MV81 97 aa11.69□□□□□ -0.54
MUC1-211ENST00000438413 FCER1GP30273 86 aa11.69□□□□□ -0.54
MUC1-211ENST00000438413 PHF5AQ7RTV0 110 aaKnown RBP11.69□□□□□ -0.54
MUC1-211ENST00000438413 AMN1Q8IY45 258 aa11.69□□□□□ -0.54
MUC1-211ENST00000438413 CSDC2Q9Y534 153 aaKnown RBP11.69□□□□□ -0.54
MUC1-211ENST00000438413 SMAGPQ0VAQ4 97 aa11.68□□□□□ -0.54
MUC1-211ENST00000438413 UBE2D4Q9Y2X8 147 aa11.68□□□□□ -0.54
MUC1-211ENST00000438413 TRAV13-1A0A0B4J241 112 aa11.67□□□□□ -0.54
MUC1-211ENST00000438413 VCYO14598 125 aa11.67□□□□□ -0.54
MUC1-211ENST00000438413 CEBPGP53567 150 aa11.67□□□□□ -0.54
MUC1-211ENST00000438413 C5orf38Q86SI9 138 aa11.67□□□□□ -0.54
MUC1-211ENST00000438413 TSKUQ8WUA8 353 aa11.67□□□□□ -0.54
MUC1-211ENST00000438413 OPRPNQ99935 248 aaPredicted RBP11.67□□□□□ -0.54
MUC1-211ENST00000438413 SMKR1H3BMG3 65 aa11.66□□□□□ -0.54
MUC1-211ENST00000438413 SPAG11BQ08648 103 aa11.65□□□□□ -0.54
MUC1-211ENST00000438413 Q6ZUT4 128 aa11.65□□□□□ -0.54
MUC1-211ENST00000438413 SUMO2P61956 95 aaKnown RBP11.64□□□□□ -0.55
MUC1-211ENST00000438413 RNF151Q2KHN1 245 aa11.64□□□□□ -0.55
MUC1-211ENST00000438413 TCTE3Q8IZS6 198 aa11.64□□□□□ -0.55
MUC1-211ENST00000438413 PRR26Q8N8Z3 221 aa11.64□□□□□ -0.55
MUC1-211ENST00000438413 KIR2DL4Q99706 377 aa11.64□□□□□ -0.55
MUC1-211ENST00000438413 PPP1R17O96001 155 aa11.63□□□□□ -0.55
MUC1-211ENST00000438413 IGLV7-43P04211 117 aa11.63□□□□□ -0.55
MUC1-211ENST00000438413 NRACQ8N912 160 aa11.63□□□□□ -0.55
MUC1-211ENST00000438413 DIRC1Q969H9 104 aa11.63□□□□□ -0.55
MUC1-211ENST00000438413 BLOC1S1P78537 153 aa11.62□□□□□ -0.55
MUC1-211ENST00000438413 LINC01551Q86U37 167 aa11.62□□□□□ -0.55
MUC1-211ENST00000438413 OR10D4PQ8NGN7 298 aa11.62□□□□□ -0.55
MUC1-211ENST00000438413 SMIM7Q9BQ49 75 aa11.62□□□□□ -0.55
MUC1-211ENST00000438413 RIGQ13278 110 aa11.61□□□□□ -0.55
MUC1-211ENST00000438413 TMEM18Q96B42 140 aa11.61□□□□□ -0.55
MUC1-211ENST00000438413 TIMM21Q9BVV7 248 aa11.61□□□□□ -0.55
MUC1-211ENST00000438413 OSTCQ9NRP0 149 aa11.61□□□□□ -0.55
MUC1-211ENST00000438413 MRPL35Q9NZE8 188 aaKnown RBP11.61□□□□□ -0.55
MUC1-211ENST00000438413 ORAOV1Q8WV07 137 aa11.6□□□□□ -0.55
MUC1-211ENST00000438413 A0A087WZ39 114 aa11.59□□□□□ -0.55
MUC1-211ENST00000438413 H0Y9J4 135 aa11.59□□□□□ -0.55
MUC1-211ENST00000438413 PPP1R2P9O14990 202 aa11.59□□□□□ -0.55
MUC1-211ENST00000438413 ALKAL2Q6UX46 152 aa11.59□□□□□ -0.55
MUC1-211ENST00000438413 IMMP2LQ96T52 175 aa11.59□□□□□ -0.55
MUC1-211ENST00000438413 FAM168BA1KXE4 195 aa11.58□□□□□ -0.56
MUC1-211ENST00000438413 ZNF727A8MUV8 499 aa11.57□□□□□ -0.56
MUC1-211ENST00000438413 F8WDY8 70 aa11.57□□□□□ -0.56
MUC1-211ENST00000438413 NDUFA1O15239 70 aa11.57□□□□□ -0.56
MUC1-211ENST00000438413 MRPL51Q4U2R6 128 aaKnown RBP11.57□□□□□ -0.56
MUC1-211ENST00000438413 KRTAP11-1Q8IUC1 163 aa11.57□□□□□ -0.56
MUC1-211ENST00000438413 EIF5A2Q9GZV4 153 aaKnown RBP11.57□□□□□ -0.56
MUC1-211ENST00000438413 V9GYV3 84 aa11.57□□□□□ -0.56
MUC1-211ENST00000438413 RPL39P62891 51 aaKnown RBP11.56□□□□□ -0.56
MUC1-211ENST00000438413 IGHV3OR16-9A0A0B4J2B5 98 aa11.55□□□□□ -0.56
MUC1-211ENST00000438413 TLX1NBP0CAT3 122 aa11.55□□□□□ -0.56
MUC1-211ENST00000438413 C10orf25Q5T742 122 aa11.55□□□□□ -0.56
MUC1-211ENST00000438413 FAM104BQ5XKR9 115 aa11.55□□□□□ -0.56
MUC1-211ENST00000438413 FAM19A5Q7Z5A7 132 aaPredicted RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms