RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 BRI3O95415 125 aa4.93□□□□□ -1.62
CSDE1-205ENST00000438362 ORMDL1Q9P0S3 153 aa4.93□□□□□ -1.62
CSDE1-205ENST00000438362 NDUFA1O15239 70 aa4.92□□□□□ -1.62
CSDE1-205ENST00000438362 MRPS36P82909 103 aaKnown RBP4.92□□□□□ -1.62
CSDE1-205ENST00000438362 SPANXCQ9NY87 97 aa4.92□□□□□ -1.62
CSDE1-205ENST00000438362 TIMM17BO60830 172 aa4.92□□□□□ -1.62
CSDE1-205ENST00000438362 GYPEP15421 78 aa4.92□□□□□ -1.62
CSDE1-205ENST00000438362 CDH23Q9H251 3354 aa4.92□□□□□ -1.62
CSDE1-205ENST00000438362 ABCA12Q86UK0 2595 aa4.92□□□□□ -1.62
CSDE1-205ENST00000438362 CRLF1O75462 422 aa4.92□□□□□ -1.62
CSDE1-205ENST00000438362 AVPP01185 164 aa4.92□□□□□ -1.62
CSDE1-205ENST00000438362 HIST2H2BCQ6DN03 193 aa4.91□□□□□ -1.62
CSDE1-205ENST00000438362 HIST2H2BDQ6DRA6 164 aa4.91□□□□□ -1.62
CSDE1-205ENST00000438362 UBE2D4Q9Y2X8 147 aa4.91□□□□□ -1.62
CSDE1-205ENST00000438362 LECT2O14960 151 aa4.91□□□□□ -1.62
CSDE1-205ENST00000438362 PRM2P04554 102 aa4.91□□□□□ -1.62
CSDE1-205ENST00000438362 MRPL23Q16540 153 aaKnown RBP4.91□□□□□ -1.62
CSDE1-205ENST00000438362 LINC00643Q86TS7 51 aa4.91□□□□□ -1.62
CSDE1-205ENST00000438362 SMIM20Q8N5G0 67 aa4.91□□□□□ -1.62
CSDE1-205ENST00000438362 KIF25-AS1Q9Y6Z4 181 aa4.91□□□□□ -1.62
CSDE1-205ENST00000438362 PRB1P04280 392 aa4.91□□□□□ -1.62
CSDE1-205ENST00000438362 LST1O00453 97 aa4.9□□□□□ -1.62
CSDE1-205ENST00000438362 ZNF702PQ9H963 129 aa4.9□□□□□ -1.62
CSDE1-205ENST00000438362 Q9HAA7 133 aa4.9□□□□□ -1.62
CSDE1-205ENST00000438362 IGHV4-31P0DP07 118 aa4.9□□□□□ -1.62
CSDE1-205ENST00000438362 PIK3CD-AS1Q5SR53 167 aa4.9□□□□□ -1.62
CSDE1-205ENST00000438362 CITED2Q99967 270 aaPredicted RBP4.9□□□□□ -1.62
CSDE1-205ENST00000438362 PRRC2AP48634 2157 aaKnown RBP4.9□□□□□ -1.63
CSDE1-205ENST00000438362 HAMPP81172 84 aa4.9□□□□□ -1.63
CSDE1-205ENST00000438362 IGKV3D-7A0A0C4DH55 119 aa4.9□□□□□ -1.63
CSDE1-205ENST00000438362 ZNF561-AS1K7EIQ3 104 aa4.89□□□□□ -1.63
CSDE1-205ENST00000438362 TRACP01848 142 aa4.89□□□□□ -1.63
CSDE1-205ENST00000438362 APOC4P55056 127 aa4.89□□□□□ -1.63
CSDE1-205ENST00000438362 POM121L12Q8N7R1 296 aa4.89□□□□□ -1.63
CSDE1-205ENST00000438362 FN1P02751 2386 aaKnown RBP4.89□□□□□ -1.63
CSDE1-205ENST00000438362 ATOX1O00244 68 aa4.89□□□□□ -1.63
CSDE1-205ENST00000438362 IGLV10-54A0A075B6I4 117 aa4.89□□□□□ -1.63
CSDE1-205ENST00000438362 LINC00315P59091 139 aa4.89□□□□□ -1.63
CSDE1-205ENST00000438362 LRRK2Q5S007 2527 aa4.89□□□□□ -1.63
CSDE1-205ENST00000438362 H7C423 109 aa4.88□□□□□ -1.63
CSDE1-205ENST00000438362 C18orf65Q6ZTR6 163 aa4.88□□□□□ -1.63
CSDE1-205ENST00000438362 C3orf56Q8N813 242 aa4.88□□□□□ -1.63
CSDE1-205ENST00000438362 DSCR8Q96T75 97 aa4.88□□□□□ -1.63
CSDE1-205ENST00000438362 ZNF580Q9UK33 172 aa4.88□□□□□ -1.63
CSDE1-205ENST00000438362 DNAJC9-AS1A6NH13 148 aa4.88□□□□□ -1.63
CSDE1-205ENST00000438362 AMELXQ99217 191 aa4.88□□□□□ -1.63
CSDE1-205ENST00000438362 TMEM126AQ9H061 195 aa4.88□□□□□ -1.63
CSDE1-205ENST00000438362 ATP5G1P05496 136 aa4.88□□□□□ -1.63
CSDE1-205ENST00000438362 A0A1B0GX51 115 aa4.87□□□□□ -1.63
CSDE1-205ENST00000438362 JMJD7-PLA2G4BH0Y9G9 81 aa4.87□□□□□ -1.63
CSDE1-205ENST00000438362 Q6ZSV7 163 aa4.87□□□□□ -1.63
CSDE1-205ENST00000438362 FAM19A4Q96LR4 140 aa4.87□□□□□ -1.63
CSDE1-205ENST00000438362 CITED1Q99966 193 aa4.87□□□□□ -1.63
CSDE1-205ENST00000438362 C14orf132Q9NPU4 83 aa4.87□□□□□ -1.63
CSDE1-205ENST00000438362 POLQO75417 2590 aa4.87□□□□□ -1.63
CSDE1-205ENST00000438362 PRO0461Q9UI25 63 aa4.87□□□□□ -1.63
CSDE1-205ENST00000438362 IBA57-AS1B1ANH7 110 aa4.86□□□□□ -1.63
CSDE1-205ENST00000438362 CXCL5P42830 114 aa4.86□□□□□ -1.63
CSDE1-205ENST00000438362 ADAMTSL4-AS1Q5T5F5 129 aa4.86□□□□□ -1.63
CSDE1-205ENST00000438362 LINC00242Q5T6M2 205 aa4.86□□□□□ -1.63
CSDE1-205ENST00000438362 CHCHD7Q9BUK0 85 aa4.86□□□□□ -1.63
CSDE1-205ENST00000438362 PRO0255Q9UI72 69 aa4.86□□□□□ -1.63
CSDE1-205ENST00000438362 COL27A1Q8IZC6 1860 aaPredicted RBP4.86□□□□□ -1.63
CSDE1-205ENST00000438362 TRBV6-4A0A1B0GX49 114 aa4.86□□□□□ -1.63
CSDE1-205ENST00000438362 KLK9Q2XQG4 91 aa4.86□□□□□ -1.63
CSDE1-205ENST00000438362 ESM1Q9NQ30 184 aa4.86□□□□□ -1.63
CSDE1-205ENST00000438362 PKD1L2Q7Z442 2459 aa4.86□□□□□ -1.63
CSDE1-205ENST00000438362 XIRP2A4UGR9 3374 aa4.86□□□□□ -1.63
CSDE1-205ENST00000438362 TRBV6-8A0A0A6YYG3 113 aa4.86□□□□□ -1.63
CSDE1-205ENST00000438362 FAM222AQ5U5X8 452 aa4.86□□□□□ -1.63
CSDE1-205ENST00000438362 LRRC75A-AS1Q8N1F1 130 aa4.86□□□□□ -1.63
CSDE1-205ENST00000438362 CDIP1Q9H305 208 aa4.86□□□□□ -1.63
CSDE1-205ENST00000438362 SMCPP49901 116 aaPredicted RBP4.85□□□□□ -1.63
CSDE1-205ENST00000438362 MTORP42345 2549 aa4.85□□□□□ -1.63
CSDE1-205ENST00000438362 RBMY1FQ15415 496 aaKnown RBP4.85□□□□□ -1.63
CSDE1-205ENST00000438362 CDC42SE2Q9NRR3 84 aa4.85□□□□□ -1.63
CSDE1-205ENST00000438362 TMEM256-PLSCR3K7ERE1 68 aa4.85□□□□□ -1.63
CSDE1-205ENST00000438362 Q6Q795 121 aa4.85□□□□□ -1.63
CSDE1-205ENST00000438362 IMUPQ9GZP8 106 aa4.85□□□□□ -1.63
CSDE1-205ENST00000438362 FAM240AA0A1B0GVK7 77 aa4.84□□□□□ -1.63
CSDE1-205ENST00000438362 SMIM1B2RUZ4 78 aa4.84□□□□□ -1.63
CSDE1-205ENST00000438362 ODF3L2Q3SX64 289 aa4.84□□□□□ -1.63
CSDE1-205ENST00000438362 DNAH14Q0VDD8 3507 aa4.84□□□□□ -1.63
CSDE1-205ENST00000438362 VPS13AQ96RL7 3174 aa4.84□□□□□ -1.63
CSDE1-205ENST00000438362 NDUFA7O95182 113 aa4.84□□□□□ -1.63
CSDE1-205ENST00000438362 SPART-AS1P0CW21 52 aa4.84□□□□□ -1.63
CSDE1-205ENST00000438362 SPAG11BQ08648 103 aa4.84□□□□□ -1.63
CSDE1-205ENST00000438362 C9orf66Q5T8R8 295 aa4.84□□□□□ -1.63
CSDE1-205ENST00000438362 ZFYVE26Q68DK2 2539 aa4.84□□□□□ -1.63
CSDE1-205ENST00000438362 M0QXV9 152 aa4.84□□□□□ -1.64
CSDE1-205ENST00000438362 UQCRQO14949 82 aa4.84□□□□□ -1.64
CSDE1-205ENST00000438362 DOPEY1Q5JWR5 2465 aa4.83□□□□□ -1.64
CSDE1-205ENST00000438362 NCR3O14931 201 aa4.83□□□□□ -1.64
CSDE1-205ENST00000438362 DEFB135Q30KP9 77 aa4.83□□□□□ -1.64
CSDE1-205ENST00000438362 Q6ZSN1 163 aa4.83□□□□□ -1.64
CSDE1-205ENST00000438362 NKAPP1Q8N9T2 125 aa4.83□□□□□ -1.64
CSDE1-205ENST00000438362 CLUHP3Q96NS8 147 aa4.83□□□□□ -1.64
CSDE1-205ENST00000438362 LAMA1P25391 3075 aa4.83□□□□□ -1.64
CSDE1-205ENST00000438362 LOC100131303A0A0U1RQF7 123 aa4.83□□□□□ -1.64
CSDE1-205ENST00000438362 CCDC179H3BU77 68 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms