RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 TMEM263Q8WUH6 116 aaKnown RBP12.13□□□□□ -0.47
TTC3-209ENST00000438055 NOP10Q9NPE3 64 aaKnown RBP12.13□□□□□ -0.47
TTC3-209ENST00000438055 ADAMTSL4-AS1Q5T5F5 129 aa12.13□□□□□ -0.47
TTC3-209ENST00000438055 VSIG2Q96IQ7 327 aa12.13□□□□□ -0.47
TTC3-209ENST00000438055 CIRBPQ14011 172 aaKnown RBP12.12□□□□□ -0.47
TTC3-209ENST00000438055 DNAJC9-AS1A6NH13 148 aa12.12□□□□□ -0.47
TTC3-209ENST00000438055 ATXN8Q156A1 80 aa12.12□□□□□ -0.47
TTC3-209ENST00000438055 UBE2L6O14933 153 aa12.12□□□□□ -0.47
TTC3-209ENST00000438055 NDUFA7O95182 113 aa12.12□□□□□ -0.47
TTC3-209ENST00000438055 TINCRA0A1B0GVN0 87 aa12.11□□□□□ -0.47
TTC3-209ENST00000438055 C11orf72Q8NBR9 251 aa12.11□□□□□ -0.47
TTC3-209ENST00000438055 NTN5Q8WTR8 489 aaPredicted RBP12.11□□□□□ -0.47
TTC3-209ENST00000438055 SPATA25Q9BR10 227 aa12.11□□□□□ -0.47
TTC3-209ENST00000438055 A0A0B4J2C4 111 aa12.11□□□□□ -0.47
TTC3-209ENST00000438055 CITED2Q99967 270 aaPredicted RBP12.11□□□□□ -0.47
TTC3-209ENST00000438055 GAGE7O76087 117 aa12.11□□□□□ -0.47
TTC3-209ENST00000438055 GAGE12FP0CL80 117 aa12.11□□□□□ -0.47
TTC3-209ENST00000438055 GAGE12GP0CL81 117 aa12.11□□□□□ -0.47
TTC3-209ENST00000438055 GAGE12IP0CL82 117 aa12.11□□□□□ -0.47
TTC3-209ENST00000438055 YAE1D1Q9NRH1 226 aa12.11□□□□□ -0.47
TTC3-209ENST00000438055 WFDC10AQ9H1F0 79 aa12.1□□□□□ -0.47
TTC3-209ENST00000438055 Q9H8V8 135 aa12.1□□□□□ -0.47
TTC3-209ENST00000438055 ATP6V0E2Q8NHE4 81 aa12.1□□□□□ -0.47
TTC3-209ENST00000438055 DNAJC30Q96LL9 226 aa12.1□□□□□ -0.47
TTC3-209ENST00000438055 TRIAP1O43715 76 aa12.09□□□□□ -0.47
TTC3-209ENST00000438055 RS1O15537 224 aa12.09□□□□□ -0.47
TTC3-209ENST00000438055 LINC01620Q4KN68 170 aa12.09□□□□□ -0.47
TTC3-209ENST00000438055 CARD19Q96LW7 228 aa12.09□□□□□ -0.47
TTC3-209ENST00000438055 TOMM7Q9P0U1 55 aa12.09□□□□□ -0.47
TTC3-209ENST00000438055 EIF4EBP3O60516 100 aaPredicted RBP12.08□□□□□ -0.48
TTC3-209ENST00000438055 MT-ATP8P03928 68 aa12.08□□□□□ -0.48
TTC3-209ENST00000438055 RPL13AP40429 203 aaKnown RBP12.08□□□□□ -0.48
TTC3-209ENST00000438055 C1orf158Q8N1D5 194 aa12.08□□□□□ -0.48
TTC3-209ENST00000438055 PRIMA1Q86XR5 153 aa12.08□□□□□ -0.48
TTC3-209ENST00000438055 LINC00694P0DN24 101 aa12.07□□□□□ -0.48
TTC3-209ENST00000438055 CLEC2BQ92478 149 aa12.07□□□□□ -0.48
TTC3-209ENST00000438055 MIAQ16674 131 aa12.07□□□□□ -0.48
TTC3-209ENST00000438055 C2orf82Q6UX34 121 aa12.07□□□□□ -0.48
TTC3-209ENST00000438055 A0A1B0GV72 72 aa12.07□□□□□ -0.48
TTC3-209ENST00000438055 CRYBA4P53673 196 aa12.07□□□□□ -0.48
TTC3-209ENST00000438055 ICOSQ9Y6W8 199 aa12.07□□□□□ -0.48
TTC3-209ENST00000438055 COX6A2Q02221 97 aa12.06□□□□□ -0.48
TTC3-209ENST00000438055 Q8N2B8 174 aa12.06□□□□□ -0.48
TTC3-209ENST00000438055 FAM104AQ969W3 186 aa12.06□□□□□ -0.48
TTC3-209ENST00000438055 TRGV4A0A0C4DH28 118 aa12.06□□□□□ -0.48
TTC3-209ENST00000438055 TMEM101Q96IK0 257 aa12.06□□□□□ -0.48
TTC3-209ENST00000438055 CR1P17927 2039 aa12.06□□□□□ -0.48
TTC3-209ENST00000438055 K7EQD1 137 aa12.06□□□□□ -0.48
TTC3-209ENST00000438055 CKS1BP61024 79 aa12.06□□□□□ -0.48
TTC3-209ENST00000438055 HERVK_113P63121 156 aa12.05□□□□□ -0.48
TTC3-209ENST00000438055 APCP25054 2843 aa12.05□□□□□ -0.48
TTC3-209ENST00000438055 ZFAND6Q6FIF0 208 aa12.04□□□□□ -0.48
TTC3-209ENST00000438055 XGP55808 180 aa12.04□□□□□ -0.48
TTC3-209ENST00000438055 BEAN1Q3B7T3 259 aa12.04□□□□□ -0.48
TTC3-209ENST00000438055 PIK3CD-AS1Q5SR53 167 aa12.03□□□□□ -0.48
TTC3-209ENST00000438055 LRRC75A-AS1Q8N1F1 130 aa12.03□□□□□ -0.48
TTC3-209ENST00000438055 CDIP1Q9H305 208 aa12.03□□□□□ -0.48
TTC3-209ENST00000438055 EDA2RQ9HAV5 297 aa12.03□□□□□ -0.48
TTC3-209ENST00000438055 TEX49A0A1B0GTD5 131 aa12.03□□□□□ -0.48
TTC3-209ENST00000438055 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.03□□□□□ -0.48
TTC3-209ENST00000438055 SCGB1A1P11684 91 aa12.03□□□□□ -0.48
TTC3-209ENST00000438055 GAGE6Q13070 117 aa12.03□□□□□ -0.48
TTC3-209ENST00000438055 LITAFQ99732 161 aa12.03□□□□□ -0.48
TTC3-209ENST00000438055 ESM1Q9NQ30 184 aa12.03□□□□□ -0.48
TTC3-209ENST00000438055 A8MTW9 85 aa12.02□□□□□ -0.48
TTC3-209ENST00000438055 TMEM262E9PQX1 116 aa12.02□□□□□ -0.49
TTC3-209ENST00000438055 LINC00242Q5T6M2 205 aa12.02□□□□□ -0.49
TTC3-209ENST00000438055 LOC100131303A0A0U1RQF7 123 aa12.01□□□□□ -0.49
TTC3-209ENST00000438055 FHL3Q13643 280 aa12.01□□□□□ -0.49
TTC3-209ENST00000438055 CHCHD5Q9BSY4 110 aa12.01□□□□□ -0.49
TTC3-209ENST00000438055 TRAV25A0A0B4J276 109 aa12.01□□□□□ -0.49
TTC3-209ENST00000438055 DEFB130BP0DP73 79 aa12.01□□□□□ -0.49
TTC3-209ENST00000438055 DEFB130AP0DP74 79 aa12.01□□□□□ -0.49
TTC3-209ENST00000438055 PLA2G2AP14555 144 aa12.01□□□□□ -0.49
TTC3-209ENST00000438055 TEX29Q8N6K0 151 aa12.01□□□□□ -0.49
TTC3-209ENST00000438055 TMEM243Q9BU79 118 aa12.01□□□□□ -0.49
TTC3-209ENST00000438055 SPANXDQ9BXN6 97 aa12□□□□□ -0.49
TTC3-209ENST00000438055 SPANXCQ9NY87 97 aa12□□□□□ -0.49
TTC3-209ENST00000438055 TRBV30A0A0K0K1B3 111 aa12□□□□□ -0.49
TTC3-209ENST00000438055 UBE2WQ96B02 151 aa12□□□□□ -0.49
TTC3-209ENST00000438055 NIPBLQ6KC79 2804 aaeCLIP12□□□□□ -0.494e-6■■■■□ 23.4
TTC3-209ENST00000438055 TIRAPP58753 221 aa11.99□□□□□ -0.49
TTC3-209ENST00000438055 DAZ2Q13117 558 aaKnown RBP11.99□□□□□ -0.49
TTC3-209ENST00000438055 DAZ4Q86SG3 579 aaKnown RBP11.99□□□□□ -0.49
TTC3-209ENST00000438055 DAZ3Q9NR90 486 aaKnown RBP11.99□□□□□ -0.49
TTC3-209ENST00000438055 TRAV8-4A0A0B4J246 113 aa11.99□□□□□ -0.49
TTC3-209ENST00000438055 SNCGO76070 127 aa11.99□□□□□ -0.49
TTC3-209ENST00000438055 TMEM86BQ8N661 226 aa11.99□□□□□ -0.49
TTC3-209ENST00000438055 TRBV10-2A0A0K0K1G8 114 aa11.99□□□□□ -0.49
TTC3-209ENST00000438055 TRAV4A0A0B4J268 109 aa11.98□□□□□ -0.49
TTC3-209ENST00000438055 NDUFA1O15239 70 aa11.98□□□□□ -0.49
TTC3-209ENST00000438055 NTM-AS1Q6ZSK4 140 aa11.98□□□□□ -0.49
TTC3-209ENST00000438055 LINC01006Q8NI28 216 aa11.98□□□□□ -0.49
TTC3-209ENST00000438055 FASNP49327 2511 aaKnown RBP11.98□□□□□ -0.49
TTC3-209ENST00000438055 IFITM1P13164 125 aa11.98□□□□□ -0.49
TTC3-209ENST00000438055 TRBV10-1A0A0K0K1A3 114 aa11.97□□□□□ -0.49
TTC3-209ENST00000438055 LINC00308Q8TCZ7 52 aa11.97□□□□□ -0.49
TTC3-209ENST00000438055 C11orf68Q9H3H3 251 aaKnown RBP11.97□□□□□ -0.49
TTC3-209ENST00000438055 UBR5O95071 2799 aaPredicted RBP11.96□□□□□ -0.5
TTC3-209ENST00000438055 PF4P02776 101 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 150.7 ms