RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 CMYA5Q8N3K9 4069 aa18.22■□□□□ 0.51
CPNE1-216ENST00000437340 LEPROTO15243 131 aa18.22■□□□□ 0.51
CPNE1-216ENST00000437340 SMAGPQ0VAQ4 97 aa18.22■□□□□ 0.51
CPNE1-216ENST00000437340 Q6ZUT4 128 aa18.22■□□□□ 0.51
CPNE1-216ENST00000437340 TINCRA0A1B0GVN0 87 aa18.21■□□□□ 0.51
CPNE1-216ENST00000437340 J3QQQ9 107 aa18.21■□□□□ 0.51
CPNE1-216ENST00000437340 NTM-AS1Q6ZSK4 140 aa18.21■□□□□ 0.51
CPNE1-216ENST00000437340 HIST1H4GQ99525 98 aa18.21■□□□□ 0.51
CPNE1-216ENST00000437340 DGAT2L7PQ6IED9 249 aa18.2■□□□□ 0.5
CPNE1-216ENST00000437340 SCGB1D4Q6XE38 83 aa18.2■□□□□ 0.5
CPNE1-216ENST00000437340 SBSPONQ8IVN8 264 aa18.19■□□□□ 0.5
CPNE1-216ENST00000437340 LGALS3P17931 250 aaKnown RBP18.19■□□□□ 0.5
CPNE1-216ENST00000437340 PTTG1IPP53801 180 aa18.19■□□□□ 0.5
CPNE1-216ENST00000437340 TSPEAR-AS2P59090 65 aa18.19■□□□□ 0.5
CPNE1-216ENST00000437340 PLEKHB2Q96CS7 222 aa18.19■□□□□ 0.5
CPNE1-216ENST00000437340 ANK2Q01484 3957 aa18.18■□□□□ 0.5
CPNE1-216ENST00000437340 UBE2V1Q13404 147 aa18.18■□□□□ 0.5
CPNE1-216ENST00000437340 RNASE13Q5GAN3 156 aaKnown RBP18.18■□□□□ 0.5
CPNE1-216ENST00000437340 C9orf118A6NHY6 69 aa18.17■□□□□ 0.5
CPNE1-216ENST00000437340 SMIM13P0DJ93 91 aa18.17■□□□□ 0.5
CPNE1-216ENST00000437340 VAMP3Q15836 100 aa18.17■□□□□ 0.5
CPNE1-216ENST00000437340 LYRM9A8MSI8 78 aa18.16■□□□□ 0.5
CPNE1-216ENST00000437340 UBE2D1P51668 147 aa18.16■□□□□ 0.5
CPNE1-216ENST00000437340 H7C423 109 aa18.15■□□□□ 0.5
CPNE1-216ENST00000437340 LINC00694P0DN24 101 aa18.15■□□□□ 0.5
CPNE1-216ENST00000437340 DEFB130BP0DP73 79 aa18.15■□□□□ 0.5
CPNE1-216ENST00000437340 DEFB130AP0DP74 79 aa18.15■□□□□ 0.5
CPNE1-216ENST00000437340 K7EP13 123 aa18.14■□□□□ 0.5
CPNE1-216ENST00000437340 TMEM243Q9BU79 118 aa18.14■□□□□ 0.5
CPNE1-216ENST00000437340 A0A0J9YY99 117 aa18.14■□□□□ 0.49
CPNE1-216ENST00000437340 LOC100131303A0A0U1RQF7 123 aa18.14■□□□□ 0.49
CPNE1-216ENST00000437340 TIRAPP58753 221 aa18.14■□□□□ 0.49
CPNE1-216ENST00000437340 DEFB135Q30KP9 77 aa18.13■□□□□ 0.49
CPNE1-216ENST00000437340 MDFIQ99750 246 aa18.13■□□□□ 0.49
CPNE1-216ENST00000437340 SPANXB1Q9NS25 103 aaPredicted RBP18.12■□□□□ 0.49
CPNE1-216ENST00000437340 FAM19A3Q7Z5A8 133 aa18.12■□□□□ 0.49
CPNE1-216ENST00000437340 GEMIN7Q9H840 131 aaKnown RBP18.12■□□□□ 0.49
CPNE1-216ENST00000437340 NHP2Q9NX24 153 aaKnown RBP18.12■□□□□ 0.49
CPNE1-216ENST00000437340 IGLV5-45A0A087WSX0 123 aa18.11■□□□□ 0.49
CPNE1-216ENST00000437340 UBE2L6O14933 153 aa18.11■□□□□ 0.49
CPNE1-216ENST00000437340 OR5A1Q8NGJ0 315 aa18.11■□□□□ 0.49
CPNE1-216ENST00000437340 IGHV1-58A0A0C4DH39 117 aa18.1■□□□□ 0.49
CPNE1-216ENST00000437340 CCL25O15444 150 aa18.1■□□□□ 0.49
CPNE1-216ENST00000437340 IGHV3-30-3P0DP02 117 aa18.09■□□□□ 0.49
CPNE1-216ENST00000437340 SRSF9Q13242 221 aaKnown RBP eCLIP18.09■□□□□ 0.49
CPNE1-216ENST00000437340 AMMECR1LQ6DCA0 310 aa18.09■□□□□ 0.49
CPNE1-216ENST00000437340 RAB37Q96AX2 223 aa18.09■□□□□ 0.49
CPNE1-216ENST00000437340 CDC42SE2Q9NRR3 84 aa18.09■□□□□ 0.49
CPNE1-216ENST00000437340 FAM222AQ5U5X8 452 aa18.09■□□□□ 0.49
CPNE1-216ENST00000437340 OXLD1Q5BKU9 147 aa18.08■□□□□ 0.48
CPNE1-216ENST00000437340 TMEM101Q96IK0 257 aa18.08■□□□□ 0.48
CPNE1-216ENST00000437340 IGHV3-64A0A075B6Q5 118 aa18.07■□□□□ 0.48
CPNE1-216ENST00000437340 A0A1B0GWB2 263 aa18.07■□□□□ 0.48
CPNE1-216ENST00000437340 H3BUT2 72 aa18.07■□□□□ 0.48
CPNE1-216ENST00000437340 IGHV4-30-4P0DP06 118 aa18.07■□□□□ 0.48
CPNE1-216ENST00000437340 MIFP14174 115 aa18.07■□□□□ 0.48
CPNE1-216ENST00000437340 HERVK_113P63121 156 aa18.07■□□□□ 0.48
CPNE1-216ENST00000437340 PKD1L1Q8TDX9 2849 aa18.07■□□□□ 0.48
CPNE1-216ENST00000437340 TRBV6-8A0A0A6YYG3 113 aa18.07■□□□□ 0.48
CPNE1-216ENST00000437340 TMEM238LA0A1B0GVL6 79 aa18.07■□□□□ 0.48
CPNE1-216ENST00000437340 A6NJY4 79 aa18.07■□□□□ 0.48
CPNE1-216ENST00000437340 C12orf74Q32Q52 190 aa18.06■□□□□ 0.48
CPNE1-216ENST00000437340 VSIG2Q96IQ7 327 aa18.06■□□□□ 0.48
CPNE1-216ENST00000437340 PRO0255Q9UI72 69 aa18.06■□□□□ 0.48
CPNE1-216ENST00000437340 IGHV4-28A0A0C4DH34 117 aa18.05■□□□□ 0.48
CPNE1-216ENST00000437340 K7ERJ3 54 aa18.04■□□□□ 0.48
CPNE1-216ENST00000437340 LINC00242Q5T6M2 205 aa18.04■□□□□ 0.48
CPNE1-216ENST00000437340 RNF183Q96D59 192 aa18.04■□□□□ 0.48
CPNE1-216ENST00000437340 TRAV8-3A0A0A6YYJ7 113 aa18.03■□□□□ 0.48
CPNE1-216ENST00000437340 CDKN2A-AS1Q9UH64 79 aa18.03■□□□□ 0.48
CPNE1-216ENST00000437340 A0A1W2PPM0 123 aa18.02■□□□□ 0.48
CPNE1-216ENST00000437340 Q8NAQ8 132 aa18.02■□□□□ 0.48
CPNE1-216ENST00000437340 SPINK8P0C7L1 97 aa18.02■□□□□ 0.47
CPNE1-216ENST00000437340 GYPEP15421 78 aa18.02■□□□□ 0.47
CPNE1-216ENST00000437340 IGHV3-30P01768 117 aa18.01■□□□□ 0.47
CPNE1-216ENST00000437340 IGHV3-30-5P0DP03 117 aa18.01■□□□□ 0.47
CPNE1-216ENST00000437340 SAMD5Q5TGI4 173 aa18.01■□□□□ 0.47
CPNE1-216ENST00000437340 C10orf126Q8N4M7 172 aa18.01■□□□□ 0.47
CPNE1-216ENST00000437340 ATP6V0E2Q8NHE4 81 aa18.01■□□□□ 0.47
CPNE1-216ENST00000437340 GAGE10A6NGK3 116 aa18■□□□□ 0.47
CPNE1-216ENST00000437340 GTF2H5Q6ZYL4 71 aa18■□□□□ 0.47
CPNE1-216ENST00000437340 A0A0J9YXY3 114 aa17.99■□□□□ 0.47
CPNE1-216ENST00000437340 TMEM238C9JI98 176 aa17.99■□□□□ 0.47
CPNE1-216ENST00000437340 KRTAP10-11P60412 298 aa17.99■□□□□ 0.47
CPNE1-216ENST00000437340 COX6A2Q02221 97 aa17.99■□□□□ 0.47
CPNE1-216ENST00000437340 NAA38Q9BRA0 125 aaKnown RBP17.99■□□□□ 0.47
CPNE1-216ENST00000437340 NDUFA12Q9UI09 145 aa17.99■□□□□ 0.47
CPNE1-216ENST00000437340 TRAV13-1A0A0B4J241 112 aa17.98■□□□□ 0.47
CPNE1-216ENST00000437340 FABP2P12104 132 aa17.98■□□□□ 0.47
CPNE1-216ENST00000437340 DAD1P61803 113 aa17.98■□□□□ 0.47
CPNE1-216ENST00000437340 ZFAND6Q6FIF0 208 aa17.98■□□□□ 0.47
CPNE1-216ENST00000437340 IGLL5B9A064 214 aa17.97■□□□□ 0.47
CPNE1-216ENST00000437340 CHCHD5Q9BSY4 110 aa17.97■□□□□ 0.47
CPNE1-216ENST00000437340 IGLV5-39A0A0G2JS06 123 aa17.96■□□□□ 0.47
CPNE1-216ENST00000437340 K7EP34 96 aa17.96■□□□□ 0.47
CPNE1-216ENST00000437340 EGFEM1PQ0D2K5 195 aa17.96■□□□□ 0.47
CPNE1-216ENST00000437340 GAGE6Q13070 117 aa17.96■□□□□ 0.47
CPNE1-216ENST00000437340 DEFB4AO15263 64 aa17.96■□□□□ 0.47
CPNE1-216ENST00000437340 PAX4O43316 350 aa17.96■□□□□ 0.47
CPNE1-216ENST00000437340 A8MZ25 164 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms