RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 Q6Q795 121 aa7.61□□□□□ -1.19
CLSTN1-203ENST00000435891 TMEM61Q8N0U2 210 aa7.61□□□□□ -1.19
CLSTN1-203ENST00000435891 LINC01587Q99440 93 aa7.61□□□□□ -1.19
CLSTN1-203ENST00000435891 TRAV8-3A0A0A6YYJ7 113 aa7.61□□□□□ -1.19
CLSTN1-203ENST00000435891 TRAV25A0A0B4J276 109 aa7.61□□□□□ -1.19
CLSTN1-203ENST00000435891 NSUN5P1Q3KNT7 163 aa7.61□□□□□ -1.19
CLSTN1-203ENST00000435891 CEMP1Q6PRD7 247 aaPredicted RBP7.61□□□□□ -1.19
CLSTN1-203ENST00000435891 C20orf203Q8NBC4 194 aa7.61□□□□□ -1.19
CLSTN1-203ENST00000435891 JMJD1CQ15652 2540 aa7.61□□□□□ -1.19
CLSTN1-203ENST00000435891 COX6CP09669 75 aa7.6□□□□□ -1.19
CLSTN1-203ENST00000435891 RNF152Q8N8N0 203 aa7.6□□□□□ -1.19
CLSTN1-203ENST00000435891 Q6ZSN1 163 aa7.6□□□□□ -1.19
CLSTN1-203ENST00000435891 FAM104AQ969W3 186 aa7.6□□□□□ -1.19
CLSTN1-203ENST00000435891 FLNAP21333 2647 aaKnown RBP7.6□□□□□ -1.19
CLSTN1-203ENST00000435891 A0A0J9YXV3 536 aa7.59□□□□□ -1.19
CLSTN1-203ENST00000435891 F5H768 121 aa7.59□□□□□ -1.19
CLSTN1-203ENST00000435891 I3L3M4 83 aa7.59□□□□□ -1.19
CLSTN1-203ENST00000435891 ZNF22P17026 224 aaPredicted RBP7.59□□□□□ -1.19
CLSTN1-203ENST00000435891 RNASE13Q5GAN3 156 aaKnown RBP7.59□□□□□ -1.19
CLSTN1-203ENST00000435891 KHDC1LQ5JSQ8 128 aa7.59□□□□□ -1.19
CLSTN1-203ENST00000435891 PAPPA-AS1Q5QFB9 102 aa7.59□□□□□ -1.19
CLSTN1-203ENST00000435891 IGLV4-3A0A075B6K6 122 aa7.59□□□□□ -1.19
CLSTN1-203ENST00000435891 J3QQQ9 107 aa7.59□□□□□ -1.19
CLSTN1-203ENST00000435891 IGHV3-30P01768 117 aa7.59□□□□□ -1.19
CLSTN1-203ENST00000435891 IGHV3-30-5P0DP03 117 aa7.59□□□□□ -1.19
CLSTN1-203ENST00000435891 C2CD3Q4AC94 2353 aa7.59□□□□□ -1.2
CLSTN1-203ENST00000435891 RHOHQ15669 191 aa7.58□□□□□ -1.2
CLSTN1-203ENST00000435891 C3orf22Q8N5N4 141 aa7.58□□□□□ -1.2
CLSTN1-203ENST00000435891 ACANP16112 2415 aa7.58□□□□□ -1.2
CLSTN1-203ENST00000435891 SLC25A29Q8N8R3 303 aa7.58□□□□□ -1.2
CLSTN1-203ENST00000435891 SETXQ7Z333 2677 aaKnown RBP7.57□□□□□ -1.2
CLSTN1-203ENST00000435891 TRBV10-2A0A0K0K1G8 114 aa7.57□□□□□ -1.2
CLSTN1-203ENST00000435891 hADV29S1A0JD25 119 aa7.57□□□□□ -1.2
CLSTN1-203ENST00000435891 TMEM223A0PJW6 202 aa7.57□□□□□ -1.2
CLSTN1-203ENST00000435891 ADARB2-AS1A8MUL3 147 aa7.57□□□□□ -1.2
CLSTN1-203ENST00000435891 HRCT1Q6UXD1 115 aa7.57□□□□□ -1.2
CLSTN1-203ENST00000435891 SBSPONQ8IVN8 264 aa7.57□□□□□ -1.2
CLSTN1-203ENST00000435891 MTORP42345 2549 aa7.57□□□□□ -1.2
CLSTN1-203ENST00000435891 M0R2P5 195 aa7.57□□□□□ -1.2
CLSTN1-203ENST00000435891 MUSTN1Q8IVN3 82 aa7.57□□□□□ -1.2
CLSTN1-203ENST00000435891 CLEC2BQ92478 149 aa7.57□□□□□ -1.2
CLSTN1-203ENST00000435891 Q96MF0 132 aa7.57□□□□□ -1.2
CLSTN1-203ENST00000435891 EIF4EBP3O60516 100 aaPredicted RBP7.57□□□□□ -1.2
CLSTN1-203ENST00000435891 IGHV3-33P01772 117 aa7.57□□□□□ -1.2
CLSTN1-203ENST00000435891 C11orf44Q8N8P7 122 aa7.57□□□□□ -1.2
CLSTN1-203ENST00000435891 CD28P10747 220 aa7.56□□□□□ -1.2
CLSTN1-203ENST00000435891 MAP6D1Q9H9H5 199 aa7.56□□□□□ -1.2
CLSTN1-203ENST00000435891 UQCRQO14949 82 aa7.56□□□□□ -1.2
CLSTN1-203ENST00000435891 TENM4Q6N022 2769 aa7.56□□□□□ -1.2
CLSTN1-203ENST00000435891 A8MTW9 85 aa7.56□□□□□ -1.2
CLSTN1-203ENST00000435891 DEFB113Q30KQ7 82 aa7.56□□□□□ -1.2
CLSTN1-203ENST00000435891 IGHV3-38A0A0C4DH36 116 aa7.55□□□□□ -1.2
CLSTN1-203ENST00000435891 Q8N2B8 174 aa7.55□□□□□ -1.2
CLSTN1-203ENST00000435891 ZNF843Q8N446 348 aa7.55□□□□□ -1.2
CLSTN1-203ENST00000435891 KRTAP1-3Q8IUG1 177 aa7.55□□□□□ -1.2
CLSTN1-203ENST00000435891 A8MZ25 164 aa7.54□□□□□ -1.2
CLSTN1-203ENST00000435891 TRACP01848 142 aa7.54□□□□□ -1.2
CLSTN1-203ENST00000435891 C11orf72Q8NBR9 251 aa7.54□□□□□ -1.2
CLSTN1-203ENST00000435891 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.54□□□□□ -1.2
CLSTN1-203ENST00000435891 IGKV2-29A2NJV5 120 aaPredicted RBP7.54□□□□□ -1.2
CLSTN1-203ENST00000435891 LEPROTO15243 131 aa7.54□□□□□ -1.2
CLSTN1-203ENST00000435891 DEFB114Q30KQ6 69 aa7.54□□□□□ -1.2
CLSTN1-203ENST00000435891 TRIAP1O43715 76 aa7.54□□□□□ -1.2
CLSTN1-203ENST00000435891 LRRC75A-AS1Q8N1F1 130 aa7.54□□□□□ -1.2
CLSTN1-203ENST00000435891 C4orf3Q8WVX3 66 aa7.54□□□□□ -1.2
CLSTN1-203ENST00000435891 C1orf43Q9BWL3 253 aa7.54□□□□□ -1.2
CLSTN1-203ENST00000435891 DYNLRB2Q8TF09 96 aa7.53□□□□□ -1.2
CLSTN1-203ENST00000435891 DSCR8Q96T75 97 aa7.53□□□□□ -1.2
CLSTN1-203ENST00000435891 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.53□□□□□ -1.2
CLSTN1-203ENST00000435891 CHCHD7Q9BUK0 85 aa7.53□□□□□ -1.2
CLSTN1-203ENST00000435891 XCL2Q9UBD3 114 aa7.53□□□□□ -1.2
CLSTN1-203ENST00000435891 TRAV13-1A0A0B4J241 112 aa7.53□□□□□ -1.2
CLSTN1-203ENST00000435891 A0A1W2PRX2 142 aa7.53□□□□□ -1.2
CLSTN1-203ENST00000435891 C4orf26Q17RF5 130 aa7.53□□□□□ -1.2
CLSTN1-203ENST00000435891 PEMTQ9UBM1 199 aa7.53□□□□□ -1.2
CLSTN1-203ENST00000435891 IGHV3-30-3P0DP02 117 aa7.52□□□□□ -1.21
CLSTN1-203ENST00000435891 Q6ZSV7 163 aa7.52□□□□□ -1.21
CLSTN1-203ENST00000435891 ITPR2Q14571 2701 aa7.52□□□□□ -1.21
CLSTN1-203ENST00000435891 IGHV3OR16-12A0A075B7B8 117 aa7.52□□□□□ -1.21
CLSTN1-203ENST00000435891 H7C423 109 aa7.52□□□□□ -1.21
CLSTN1-203ENST00000435891 ZNF415Q09FC8 603 aa7.52□□□□□ -1.21
CLSTN1-203ENST00000435891 ODF3L2Q3SX64 289 aa7.52□□□□□ -1.21
CLSTN1-203ENST00000435891 LINC00467Q9BRT7 94 aa7.52□□□□□ -1.21
CLSTN1-203ENST00000435891 MRPS36P82909 103 aaKnown RBP7.51□□□□□ -1.21
CLSTN1-203ENST00000435891 HIST2H2BCQ6DN03 193 aa7.51□□□□□ -1.21
CLSTN1-203ENST00000435891 KIR2DL5BQ8NHK3 375 aa7.51□□□□□ -1.21
CLSTN1-203ENST00000435891 PYGO1Q9Y3Y4 419 aa7.51□□□□□ -1.21
CLSTN1-203ENST00000435891 A0A0J9YXY3 114 aa7.51□□□□□ -1.21
CLSTN1-203ENST00000435891 WFDC11Q8NEX6 87 aa7.51□□□□□ -1.21
CLSTN1-203ENST00000435891 UBE2D4Q9Y2X8 147 aa7.51□□□□□ -1.21
CLSTN1-203ENST00000435891 A0A0U1RRA0 63 aa7.51□□□□□ -1.21
CLSTN1-203ENST00000435891 ANK3Q12955 4377 aaKnown RBP7.5□□□□□ -1.21
CLSTN1-203ENST00000435891 TMEM263Q8WUH6 116 aaKnown RBP7.5□□□□□ -1.21
CLSTN1-203ENST00000435891 LINC00526Q96FQ7 95 aa7.5□□□□□ -1.21
CLSTN1-203ENST00000435891 TIMM21Q9BVV7 248 aa7.5□□□□□ -1.21
CLSTN1-203ENST00000435891 ADAMTSL4-AS1Q5T5F5 129 aa7.5□□□□□ -1.21
CLSTN1-203ENST00000435891 LITAFQ99732 161 aa7.5□□□□□ -1.21
CLSTN1-203ENST00000435891 ESM1Q9NQ30 184 aa7.5□□□□□ -1.21
CLSTN1-203ENST00000435891 PKIGQ9Y2B9 76 aa7.5□□□□□ -1.21
CLSTN1-203ENST00000435891 ICOSQ9Y6W8 199 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms