RNA–Protein interactions for RNA: ENST00000434278.5

LMBR1-208, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 678 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-208ENST00000434278 C7orf77A4D0Y5 90 aa12.94□□□□□ -0.34
LMBR1-208ENST00000434278 PPP1R17O96001 155 aa12.94□□□□□ -0.34
LMBR1-208ENST00000434278 FOXI1Q12951 378 aa12.94□□□□□ -0.34
LMBR1-208ENST00000434278 CFAP161Q6P656 301 aa12.94□□□□□ -0.34
LMBR1-208ENST00000434278 MRPL52Q86TS9 123 aaKnown RBP12.94□□□□□ -0.34
LMBR1-208ENST00000434278 CDC42SE2Q9NRR3 84 aa12.94□□□□□ -0.34
LMBR1-208ENST00000434278 DMBT1Q9UGM3 2413 aaPredicted RBP12.93□□□□□ -0.34
LMBR1-208ENST00000434278 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.93□□□□□ -0.34
LMBR1-208ENST00000434278 LINC00959A0A1B0GUT2 108 aa12.93□□□□□ -0.34
LMBR1-208ENST00000434278 A0A1B0GW15 77 aa12.93□□□□□ -0.34
LMBR1-208ENST00000434278 HIGD2BQ4VC39 106 aa12.93□□□□□ -0.34
LMBR1-208ENST00000434278 IGHV3-64A0A075B6Q5 118 aa12.92□□□□□ -0.34
LMBR1-208ENST00000434278 FCER1GP30273 86 aa12.92□□□□□ -0.34
LMBR1-208ENST00000434278 XCL1P47992 114 aa12.92□□□□□ -0.34
LMBR1-208ENST00000434278 MRPL54Q6P161 138 aaKnown RBP12.92□□□□□ -0.34
LMBR1-208ENST00000434278 CCL25O15444 150 aa12.91□□□□□ -0.34
LMBR1-208ENST00000434278 CIRBPQ14011 172 aaKnown RBP12.91□□□□□ -0.34
LMBR1-208ENST00000434278 ZNF664Q8N3J9 261 aa12.91□□□□□ -0.34
LMBR1-208ENST00000434278 PKHD1L1Q86WI1 4243 aa12.9□□□□□ -0.34
LMBR1-208ENST00000434278 A0A1B0GXF2 115 aa12.9□□□□□ -0.34
LMBR1-208ENST00000434278 LINC00862A6NCI5 91 aa12.9□□□□□ -0.34
LMBR1-208ENST00000434278 PPP1R2P9O14990 202 aa12.9□□□□□ -0.34
LMBR1-208ENST00000434278 CKS2P33552 79 aa12.9□□□□□ -0.34
LMBR1-208ENST00000434278 KIR2DL4Q99706 377 aa12.9□□□□□ -0.34
LMBR1-208ENST00000434278 TRBV24-1A0A075B6N3 115 aa12.89□□□□□ -0.35
LMBR1-208ENST00000434278 GVQW2A0A096LPI5 108 aaPredicted RBP12.89□□□□□ -0.35
LMBR1-208ENST00000434278 CHTF8P0CG12 524 aa12.89□□□□□ -0.35
LMBR1-208ENST00000434278 HBBP68871 147 aa12.89□□□□□ -0.35
LMBR1-208ENST00000434278 C20orf78Q9BR46 151 aa12.89□□□□□ -0.35
LMBR1-208ENST00000434278 UBE2D4Q9Y2X8 147 aa12.89□□□□□ -0.35
LMBR1-208ENST00000434278 D6R8Y8 96 aa12.87□□□□□ -0.35
LMBR1-208ENST00000434278 TNFRSF6BO95407 300 aa12.87□□□□□ -0.35
LMBR1-208ENST00000434278 S100A8P05109 93 aa12.87□□□□□ -0.35
LMBR1-208ENST00000434278 SS18Q15532 418 aa12.87□□□□□ -0.35
LMBR1-208ENST00000434278 LRP1Q07954 4544 aaKnown RBP12.87□□□□□ -0.35
LMBR1-208ENST00000434278 FAT3Q8TDW7 4589 aa12.86□□□□□ -0.35
LMBR1-208ENST00000434278 F8W036 122 aa12.86□□□□□ -0.35
LMBR1-208ENST00000434278 RPL37AP61513 92 aaKnown RBP12.86□□□□□ -0.35
LMBR1-208ENST00000434278 RPL32P62910 135 aaKnown RBP12.86□□□□□ -0.35
LMBR1-208ENST00000434278 CSDC2Q9Y534 153 aaKnown RBP12.86□□□□□ -0.35
LMBR1-208ENST00000434278 RAB14P61106 215 aa12.85□□□□□ -0.35
LMBR1-208ENST00000434278 COX6A2Q02221 97 aa12.85□□□□□ -0.35
LMBR1-208ENST00000434278 RNASE13Q5GAN3 156 aaKnown RBP12.85□□□□□ -0.35
LMBR1-208ENST00000434278 CD164L2Q6UWJ8 174 aa12.85□□□□□ -0.35
LMBR1-208ENST00000434278 SPACA4Q8TDM5 124 aa12.85□□□□□ -0.35
LMBR1-208ENST00000434278 IGHV1-58A0A0C4DH39 117 aa12.84□□□□□ -0.35
LMBR1-208ENST00000434278 KRTAP29-1A8MX34 341 aaPredicted RBP12.84□□□□□ -0.35
LMBR1-208ENST00000434278 NPYP01303 97 aa12.84□□□□□ -0.35
LMBR1-208ENST00000434278 PRSS3P2Q8NHM4 247 aa12.84□□□□□ -0.35
LMBR1-208ENST00000434278 LINC00526Q96FQ7 95 aa12.84□□□□□ -0.35
LMBR1-208ENST00000434278 SMIM2Q9BVW6 85 aa12.84□□□□□ -0.35
LMBR1-208ENST00000434278 A0A087WYN8 130 aa12.83□□□□□ -0.36
LMBR1-208ENST00000434278 J3QL48 77 aa12.83□□□□□ -0.36
LMBR1-208ENST00000434278 SMAGPQ0VAQ4 97 aa12.83□□□□□ -0.36
LMBR1-208ENST00000434278 ATP5L2Q7Z4Y8 100 aa12.83□□□□□ -0.36
LMBR1-208ENST00000434278 DPH3Q96FX2 82 aa12.83□□□□□ -0.36
LMBR1-208ENST00000434278 Q6ZUT4 128 aa12.82□□□□□ -0.36
LMBR1-208ENST00000434278 TIMM21Q9BVV7 248 aa12.82□□□□□ -0.36
LMBR1-208ENST00000434278 C1orf196B1AJZ1 125 aa12.81□□□□□ -0.36
LMBR1-208ENST00000434278 HNRNPA3P51991 378 aaKnown RBP12.81□□□□□ -0.36
LMBR1-208ENST00000434278 RPL39P62891 51 aaKnown RBP12.81□□□□□ -0.36
LMBR1-208ENST00000434278 PNRC1Q12796 327 aaPredicted RBP12.81□□□□□ -0.36
LMBR1-208ENST00000434278 TMEM18Q96B42 140 aa12.81□□□□□ -0.36
LMBR1-208ENST00000434278 TRAV13-1A0A0B4J241 112 aa12.8□□□□□ -0.36
LMBR1-208ENST00000434278 PHOX2AO14813 284 aa12.8□□□□□ -0.36
LMBR1-208ENST00000434278 PPBPP02775 128 aa12.8□□□□□ -0.36
LMBR1-208ENST00000434278 CLLU1Q5K131 121 aa12.8□□□□□ -0.36
LMBR1-208ENST00000434278 FAM104AQ969W3 186 aa12.8□□□□□ -0.36
LMBR1-208ENST00000434278 TCAPO15273 167 aa12.79□□□□□ -0.36
LMBR1-208ENST00000434278 TMEM136Q6ZRR5 245 aa12.79□□□□□ -0.36
LMBR1-208ENST00000434278 ORMDL3Q8N138 153 aa12.79□□□□□ -0.36
LMBR1-208ENST00000434278 ANAPC16Q96DE5 110 aa12.79□□□□□ -0.36
LMBR1-208ENST00000434278 PLAC8Q9NZF1 115 aa12.79□□□□□ -0.36
LMBR1-208ENST00000434278 IGKV2-24A0A0C4DH68 120 aa12.78□□□□□ -0.36
LMBR1-208ENST00000434278 MT-ND4LP03901 98 aa12.78□□□□□ -0.36
LMBR1-208ENST00000434278 A0A096LNI7 61 aa12.77□□□□□ -0.37
LMBR1-208ENST00000434278 ZNF561-AS1K7EIQ3 104 aa12.77□□□□□ -0.37
LMBR1-208ENST00000434278 MAJINQ3KP22 176 aa12.77□□□□□ -0.37
LMBR1-208ENST00000434278 CARD19Q96LW7 228 aa12.77□□□□□ -0.37
LMBR1-208ENST00000434278 PRELID3AQ96N28 172 aa12.77□□□□□ -0.37
LMBR1-208ENST00000434278 OPRPNQ99935 248 aaPredicted RBP12.77□□□□□ -0.37
LMBR1-208ENST00000434278 COX7A2LO14548 114 aa12.76□□□□□ -0.37
LMBR1-208ENST00000434278 MALP21145 153 aa12.76□□□□□ -0.37
LMBR1-208ENST00000434278 SYCNQ0VAF6 134 aa12.75□□□□□ -0.37
LMBR1-208ENST00000434278 C5orf38Q86SI9 138 aa12.75□□□□□ -0.37
LMBR1-208ENST00000434278 SPANXA1Q9NS26 97 aa12.75□□□□□ -0.37
LMBR1-208ENST00000434278 IGLV4-69A0A075B6H9 119 aa12.74□□□□□ -0.37
LMBR1-208ENST00000434278 IFITM2Q01629 132 aa12.74□□□□□ -0.37
LMBR1-208ENST00000434278 MRPS36P82909 103 aaKnown RBP12.73□□□□□ -0.37
LMBR1-208ENST00000434278 STPG4Q8N801 248 aa12.73□□□□□ -0.37
LMBR1-208ENST00000434278 PRSS47A8MTI9 375 aa12.72□□□□□ -0.37
LMBR1-208ENST00000434278 OXTP01178 125 aa12.72□□□□□ -0.37
LMBR1-208ENST00000434278 ADCYAP1P18509 176 aa12.72□□□□□ -0.37
LMBR1-208ENST00000434278 RAB5AP20339 215 aa12.72□□□□□ -0.37
LMBR1-208ENST00000434278 LOC389332A0A1B0GUA5 103 aa12.71□□□□□ -0.37
LMBR1-208ENST00000434278 Q6ZRU5 148 aa12.71□□□□□ -0.37
LMBR1-208ENST00000434278 LAMTOR2Q9Y2Q5 125 aa12.71□□□□□ -0.37
LMBR1-208ENST00000434278 MAP1LC3AQ9H492 121 aa12.69□□□□□ -0.38
LMBR1-208ENST00000434278 PKIGQ9Y2B9 76 aa12.69□□□□□ -0.38
LMBR1-208ENST00000434278 IGHV3OR16-9A0A0B4J2B5 98 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 652 ms