RNA–Protein interactions for RNA: ENST00000433257.5

DDX56-205, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-205ENST00000433257 IGLV5-45A0A087WSX0 123 aa10.79□□□□□ -0.68
DDX56-205ENST00000433257 INAFM1C9JVW0 142 aa10.79□□□□□ -0.68
DDX56-205ENST00000433257 NDUFA1O15239 70 aa10.79□□□□□ -0.68
DDX56-205ENST00000433257 UBE2E2Q96LR5 201 aa10.79□□□□□ -0.68
DDX56-205ENST00000433257 CLUHP3Q96NS8 147 aa10.79□□□□□ -0.68
DDX56-205ENST00000433257 UBE2D4Q9Y2X8 147 aa10.79□□□□□ -0.68
DDX56-205ENST00000433257 HIVEP2P31629 2446 aa10.79□□□□□ -0.68
DDX56-205ENST00000433257 TLN2Q9Y4G6 2542 aa10.78□□□□□ -0.68
DDX56-205ENST00000433257 GAGE12JA6NER3 117 aa10.78□□□□□ -0.68
DDX56-205ENST00000433257 GAGE7O76087 117 aa10.78□□□□□ -0.68
DDX56-205ENST00000433257 IGKV3-20P01619 116 aa10.78□□□□□ -0.68
DDX56-205ENST00000433257 GAGE12FP0CL80 117 aa10.78□□□□□ -0.68
DDX56-205ENST00000433257 GAGE12GP0CL81 117 aa10.78□□□□□ -0.68
DDX56-205ENST00000433257 GAGE12IP0CL82 117 aa10.78□□□□□ -0.68
DDX56-205ENST00000433257 HERVK_113P63121 156 aa10.78□□□□□ -0.68
DDX56-205ENST00000433257 GAGE4Q13068 117 aa10.78□□□□□ -0.68
DDX56-205ENST00000433257 WFDC12Q8WWY7 111 aa10.78□□□□□ -0.68
DDX56-205ENST00000433257 H7C423 109 aa10.77□□□□□ -0.69
DDX56-205ENST00000433257 FAM19A3Q7Z5A8 133 aa10.77□□□□□ -0.69
DDX56-205ENST00000433257 DUX3Q96PT4 197 aa10.77□□□□□ -0.69
DDX56-205ENST00000433257 CHCHD7Q9BUK0 85 aa10.77□□□□□ -0.69
DDX56-205ENST00000433257 IMUPQ9GZP8 106 aa10.77□□□□□ -0.69
DDX56-205ENST00000433257 ABCA2Q9BZC7 2435 aa10.77□□□□□ -0.69
DDX56-205ENST00000433257 IGHV3-53P01767 116 aa10.76□□□□□ -0.69
DDX56-205ENST00000433257 C15orf53Q8NAA6 179 aa10.76□□□□□ -0.69
DDX56-205ENST00000433257 AVPP01185 164 aa10.76□□□□□ -0.69
DDX56-205ENST00000433257 DUX5Q96PT3 197 aa10.76□□□□□ -0.69
DDX56-205ENST00000433257 PEMTQ9UBM1 199 aa10.76□□□□□ -0.69
DDX56-205ENST00000433257 TEP1Q99973 2627 aaKnown RBP10.75□□□□□ -0.69
DDX56-205ENST00000433257 TEX49A0A1B0GTD5 131 aa10.75□□□□□ -0.69
DDX56-205ENST00000433257 CRLF1O75462 422 aa10.75□□□□□ -0.69
DDX56-205ENST00000433257 SYNJ2BPP57105 145 aa10.75□□□□□ -0.69
DDX56-205ENST00000433257 BEAN1Q3B7T3 259 aa10.75□□□□□ -0.69
DDX56-205ENST00000433257 DEFB104AQ8WTQ1 72 aa10.75□□□□□ -0.69
DDX56-205ENST00000433257 FAM104AQ969W3 186 aa10.75□□□□□ -0.69
DDX56-205ENST00000433257 TRAV8-3A0A0A6YYJ7 113 aa10.74□□□□□ -0.69
DDX56-205ENST00000433257 TRAV4A0A0B4J268 109 aa10.74□□□□□ -0.69
DDX56-205ENST00000433257 EDN2P20800 178 aa10.74□□□□□ -0.69
DDX56-205ENST00000433257 DGAT2L7PQ6IED9 249 aa10.74□□□□□ -0.69
DDX56-205ENST00000433257 RS1O15537 224 aa10.73□□□□□ -0.69
DDX56-205ENST00000433257 HOXD3P31249 432 aaPredicted RBP10.73□□□□□ -0.69
DDX56-205ENST00000433257 HERV-K104P63124 156 aa10.73□□□□□ -0.69
DDX56-205ENST00000433257 ADAMTSL4-AS1Q5T5F5 129 aa10.73□□□□□ -0.69
DDX56-205ENST00000433257 CSDC2Q9Y534 153 aaKnown RBP10.73□□□□□ -0.69
DDX56-205ENST00000433257 TRBV7-7A0A0K0K1E9 115 aa10.73□□□□□ -0.69
DDX56-205ENST00000433257 MTORP42345 2549 aa10.72□□□□□ -0.69
DDX56-205ENST00000433257 ANK3Q12955 4377 aaKnown RBP10.72□□□□□ -0.69
DDX56-205ENST00000433257 IGLV5-39A0A0G2JS06 123 aa10.72□□□□□ -0.69
DDX56-205ENST00000433257 COX7A2LO14548 114 aa10.72□□□□□ -0.69
DDX56-205ENST00000433257 INSP01308 110 aa10.72□□□□□ -0.69
DDX56-205ENST00000433257 NHLRC4P0CG21 123 aaPredicted RBP10.72□□□□□ -0.69
DDX56-205ENST00000433257 TMEM101Q96IK0 257 aa10.72□□□□□ -0.69
DDX56-205ENST00000433257 OVOL2Q9BRP0 275 aa10.72□□□□□ -0.69
DDX56-205ENST00000433257 VPREB3Q9UKI3 123 aa10.72□□□□□ -0.69
DDX56-205ENST00000433257 SONP18583 2426 aaKnown RBP10.71□□□□□ -0.69
DDX56-205ENST00000433257 ZFHX3Q15911 3703 aa10.71□□□□□ -0.69
DDX56-205ENST00000433257 TRACP01848 142 aa10.71□□□□□ -0.69
DDX56-205ENST00000433257 PF4P02776 101 aa10.71□□□□□ -0.69
DDX56-205ENST00000433257 ADARB2-AS1A8MUL3 147 aa10.7□□□□□ -0.7
DDX56-205ENST00000433257 DEFB131AP59861 70 aa10.7□□□□□ -0.7
DDX56-205ENST00000433257 DEFB112Q30KQ8 113 aa10.7□□□□□ -0.7
DDX56-205ENST00000433257 TRBV10-1A0A0K0K1A3 114 aa10.69□□□□□ -0.7
DDX56-205ENST00000433257 IGHV4-59P01825 116 aa10.69□□□□□ -0.7
DDX56-205ENST00000433257 ATP5G1P05496 136 aa10.69□□□□□ -0.7
DDX56-205ENST00000433257 LINC00308Q8TCZ7 52 aa10.69□□□□□ -0.7
DDX56-205ENST00000433257 NIPBLQ6KC79 2804 aaeCLIP10.69□□□□□ -0.7
DDX56-205ENST00000433257 NSD1Q96L73 2696 aaPredicted RBP10.69□□□□□ -0.7
DDX56-205ENST00000433257 RBMY1A1P0DJD3 496 aaKnown RBP10.69□□□□□ -0.7
DDX56-205ENST00000433257 RBMY1CP0DJD4 496 aa10.69□□□□□ -0.7
DDX56-205ENST00000433257 RBMY1FQ15415 496 aaKnown RBP10.69□□□□□ -0.7
DDX56-205ENST00000433257 TMEM95Q3KNT9 176 aa10.69□□□□□ -0.7
DDX56-205ENST00000433257 FSHBP01225 129 aa10.68□□□□□ -0.7
DDX56-205ENST00000433257 LINC01587Q99440 93 aa10.68□□□□□ -0.7
DDX56-205ENST00000433257 FN1P02751 2386 aaKnown RBP10.67□□□□□ -0.7
DDX56-205ENST00000433257 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.67□□□□□ -0.7
DDX56-205ENST00000433257 IGHV3-73A0A0B4J1V6 119 aa10.67□□□□□ -0.7
DDX56-205ENST00000433257 IGKV2-29A2NJV5 120 aaPredicted RBP10.67□□□□□ -0.7
DDX56-205ENST00000433257 KNCNA6PVL3 124 aa10.67□□□□□ -0.7
DDX56-205ENST00000433257 B5MCH6 92 aa10.67□□□□□ -0.7
DDX56-205ENST00000433257 INAFM2P0DMQ5 153 aa10.67□□□□□ -0.7
DDX56-205ENST00000433257 DAZ2Q13117 558 aaKnown RBP10.67□□□□□ -0.7
DDX56-205ENST00000433257 FAM222AQ5U5X8 452 aa10.67□□□□□ -0.7
DDX56-205ENST00000433257 DAZ4Q86SG3 579 aaKnown RBP10.67□□□□□ -0.7
DDX56-205ENST00000433257 C11orf72Q8NBR9 251 aa10.67□□□□□ -0.7
DDX56-205ENST00000433257 DAZ3Q9NR90 486 aaKnown RBP10.67□□□□□ -0.7
DDX56-205ENST00000433257 CDKN2A-AS1Q9UH64 79 aa10.67□□□□□ -0.7
DDX56-205ENST00000433257 CEMP1Q6PRD7 247 aaPredicted RBP10.66□□□□□ -0.7
DDX56-205ENST00000433257 SHISA2Q6UWI4 295 aa10.66□□□□□ -0.7
DDX56-205ENST00000433257 CLEC2BQ92478 149 aa10.66□□□□□ -0.7
DDX56-205ENST00000433257 TMEM126AQ9H061 195 aa10.66□□□□□ -0.7
DDX56-205ENST00000433257 RPL36AP83881 106 aaKnown RBP10.66□□□□□ -0.7
DDX56-205ENST00000433257 RPL36ALQ969Q0 106 aaKnown RBP10.66□□□□□ -0.7
DDX56-205ENST00000433257 TRAV25A0A0B4J276 109 aa10.65□□□□□ -0.7
DDX56-205ENST00000433257 HTN1P15515 57 aa10.65□□□□□ -0.7
DDX56-205ENST00000433257 Q6YL49 198 aa10.65□□□□□ -0.7
DDX56-205ENST00000433257 LINC00643Q86TS7 51 aa10.65□□□□□ -0.7
DDX56-205ENST00000433257 Q9H8V8 135 aa10.65□□□□□ -0.7
DDX56-205ENST00000433257 ZNF702PQ9H963 129 aa10.65□□□□□ -0.7
DDX56-205ENST00000433257 SS18L2Q9UHA2 77 aa10.65□□□□□ -0.7
DDX56-205ENST00000433257 TRAV13-2A0A0B4J235 113 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms