RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 GAGE12HA6NDE8 117 aa6.37□□□□□ -1.39
HDAC6-207ENST00000430858 TCAPO15273 167 aa6.37□□□□□ -1.39
HDAC6-207ENST00000430858 PPBPP02775 128 aa6.37□□□□□ -1.39
HDAC6-207ENST00000430858 RPL32P62910 135 aaKnown RBP6.37□□□□□ -1.39
HDAC6-207ENST00000430858 IFITM2Q01629 132 aa6.37□□□□□ -1.39
HDAC6-207ENST00000430858 SMAGPQ0VAQ4 97 aa6.37□□□□□ -1.39
HDAC6-207ENST00000430858 CFAP161Q6P656 301 aa6.37□□□□□ -1.39
HDAC6-207ENST00000430858 UQCC3Q6UW78 93 aa6.37□□□□□ -1.39
HDAC6-207ENST00000430858 C9orf163Q8N9P6 203 aa6.37□□□□□ -1.39
HDAC6-207ENST00000430858 CHCHD10Q8WYQ3 142 aaPredicted RBP6.37□□□□□ -1.39
HDAC6-207ENST00000430858 hDV102S1A0JD36 115 aa6.36□□□□□ -1.39
HDAC6-207ENST00000430858 D6R8Y8 96 aa6.36□□□□□ -1.39
HDAC6-207ENST00000430858 J3QL48 77 aa6.36□□□□□ -1.39
HDAC6-207ENST00000430858 PHOX2AO14813 284 aa6.36□□□□□ -1.39
HDAC6-207ENST00000430858 TNFRSF6BO95407 300 aa6.36□□□□□ -1.39
HDAC6-207ENST00000430858 CNBPP62633 177 aaKnown RBP6.36□□□□□ -1.39
HDAC6-207ENST00000430858 TMEM18Q96B42 140 aa6.36□□□□□ -1.39
HDAC6-207ENST00000430858 CHAC1Q9BUX1 264 aa6.36□□□□□ -1.39
HDAC6-207ENST00000430858 CDC42SE2Q9NRR3 84 aa6.36□□□□□ -1.39
HDAC6-207ENST00000430858 AP5S1Q9NUS5 200 aa6.36□□□□□ -1.39
HDAC6-207ENST00000430858 CSDC2Q9Y534 153 aaKnown RBP6.36□□□□□ -1.39
HDAC6-207ENST00000430858 ABCA13Q86UQ4 5058 aa6.36□□□□□ -1.39
HDAC6-207ENST00000430858 LINC00959A0A1B0GUT2 108 aa6.35□□□□□ -1.39
HDAC6-207ENST00000430858 SCXQ7RTU7 201 aa6.35□□□□□ -1.39
HDAC6-207ENST00000430858 ORMDL3Q8N138 153 aa6.35□□□□□ -1.39
HDAC6-207ENST00000430858 ZNF664Q8N3J9 261 aa6.35□□□□□ -1.39
HDAC6-207ENST00000430858 SMIM2Q9BVW6 85 aa6.35□□□□□ -1.39
HDAC6-207ENST00000430858 UBE2D4Q9Y2X8 147 aa6.35□□□□□ -1.39
HDAC6-207ENST00000430858 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.34□□□□□ -1.39
HDAC6-207ENST00000430858 TMEM218A2RU14 115 aa6.34□□□□□ -1.39
HDAC6-207ENST00000430858 NPYP01303 97 aa6.34□□□□□ -1.39
HDAC6-207ENST00000430858 INAFM2P0DMQ5 153 aa6.34□□□□□ -1.39
HDAC6-207ENST00000430858 SS18Q15532 418 aa6.34□□□□□ -1.39
HDAC6-207ENST00000430858 C15orf56Q8N910 161 aa6.34□□□□□ -1.39
HDAC6-207ENST00000430858 TIMM21Q9BVV7 248 aa6.34□□□□□ -1.39
HDAC6-207ENST00000430858 CCL25O15444 150 aa6.33□□□□□ -1.4
HDAC6-207ENST00000430858 ADCYAP1P18509 176 aa6.33□□□□□ -1.4
HDAC6-207ENST00000430858 XCL1P47992 114 aa6.33□□□□□ -1.4
HDAC6-207ENST00000430858 FOXI1Q12951 378 aa6.33□□□□□ -1.4
HDAC6-207ENST00000430858 SDIM1Q6ZPB5 146 aa6.33□□□□□ -1.4
HDAC6-207ENST00000430858 TMEM136Q6ZRR5 245 aa6.33□□□□□ -1.4
HDAC6-207ENST00000430858 CIRBP-AS1Q8TBR5 109 aa6.33□□□□□ -1.4
HDAC6-207ENST00000430858 PRELID3AQ96N28 172 aa6.33□□□□□ -1.4
HDAC6-207ENST00000430858 IMMP2LQ96T52 175 aa6.33□□□□□ -1.4
HDAC6-207ENST00000430858 LAMTOR2Q9Y2Q5 125 aa6.33□□□□□ -1.4
HDAC6-207ENST00000430858 FAT1Q14517 4588 aa6.32□□□□□ -1.4
HDAC6-207ENST00000430858 IGHV3-64A0A075B6Q5 118 aa6.32□□□□□ -1.4
HDAC6-207ENST00000430858 C1orf196B1AJZ1 125 aa6.32□□□□□ -1.4
HDAC6-207ENST00000430858 SLPIP03973 132 aa6.32□□□□□ -1.4
HDAC6-207ENST00000430858 PLA2G1BP04054 148 aaKnown RBP6.32□□□□□ -1.4
HDAC6-207ENST00000430858 CD164L2Q6UWJ8 174 aa6.32□□□□□ -1.4
HDAC6-207ENST00000430858 LINC00528Q8N1L1 170 aa6.32□□□□□ -1.4
HDAC6-207ENST00000430858 SEC11CQ9BY50 192 aa6.32□□□□□ -1.4
HDAC6-207ENST00000430858 CTDSP1Q9GZU7 261 aa6.32□□□□□ -1.4
HDAC6-207ENST00000430858 DNAH8Q96JB1 4490 aa6.31□□□□□ -1.4
HDAC6-207ENST00000430858 GVQW2A0A096LPI5 108 aaPredicted RBP6.31□□□□□ -1.4
HDAC6-207ENST00000430858 IGHV1-58A0A0C4DH39 117 aa6.31□□□□□ -1.4
HDAC6-207ENST00000430858 PRSS47A8MTI9 375 aa6.31□□□□□ -1.4
HDAC6-207ENST00000430858 RAB5AP20339 215 aa6.31□□□□□ -1.4
HDAC6-207ENST00000430858 HIGD2BQ4VC39 106 aa6.31□□□□□ -1.4
HDAC6-207ENST00000430858 TRAV13-1A0A0B4J241 112 aa6.3□□□□□ -1.4
HDAC6-207ENST00000430858 RPL39P62891 51 aaKnown RBP6.3□□□□□ -1.4
HDAC6-207ENST00000430858 Q6ZUT4 128 aa6.3□□□□□ -1.4
HDAC6-207ENST00000430858 COMMD7Q86VX2 200 aa6.3□□□□□ -1.4
HDAC6-207ENST00000430858 MAP1LC3AQ9H492 121 aa6.3□□□□□ -1.4
HDAC6-207ENST00000430858 SPANXA1Q9NS26 97 aa6.3□□□□□ -1.4
HDAC6-207ENST00000430858 TRAV9-1A0A075B6T8 112 aa6.29□□□□□ -1.4
HDAC6-207ENST00000430858 MRPS36P82909 103 aaKnown RBP6.29□□□□□ -1.4
HDAC6-207ENST00000430858 CIRBPQ14011 172 aaKnown RBP6.29□□□□□ -1.4
HDAC6-207ENST00000430858 RNASE13Q5GAN3 156 aaKnown RBP6.29□□□□□ -1.4
HDAC6-207ENST00000430858 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.29□□□□□ -1.4
HDAC6-207ENST00000430858 LOC389332A0A1B0GUA5 103 aa6.28□□□□□ -1.4
HDAC6-207ENST00000430858 PANO1I0J062 215 aa6.28□□□□□ -1.4
HDAC6-207ENST00000430858 ZNF561-AS1K7EIQ3 104 aa6.28□□□□□ -1.4
HDAC6-207ENST00000430858 COX7A2LO14548 114 aa6.28□□□□□ -1.4
HDAC6-207ENST00000430858 MALP21145 153 aa6.28□□□□□ -1.4
HDAC6-207ENST00000430858 IFI27P40305 119 aaPredicted RBP6.28□□□□□ -1.4
HDAC6-207ENST00000430858 K7EMI3 77 aa6.27□□□□□ -1.41
HDAC6-207ENST00000430858 S100PP25815 95 aa6.27□□□□□ -1.41
HDAC6-207ENST00000430858 COX6A2Q02221 97 aa6.27□□□□□ -1.41
HDAC6-207ENST00000430858 Q8N8P6 123 aa6.27□□□□□ -1.41
HDAC6-207ENST00000430858 FAM104AQ969W3 186 aa6.27□□□□□ -1.41
HDAC6-207ENST00000430858 DPH3Q96FX2 82 aa6.27□□□□□ -1.41
HDAC6-207ENST00000430858 PKIGQ9Y2B9 76 aa6.27□□□□□ -1.41
HDAC6-207ENST00000430858 PYGO1Q9Y3Y4 419 aa6.27□□□□□ -1.41
HDAC6-207ENST00000430858 APOMO95445 188 aa6.26□□□□□ -1.41
HDAC6-207ENST00000430858 ORMDL2Q53FV1 153 aa6.26□□□□□ -1.41
HDAC6-207ENST00000430858 C10orf91Q5T1B1 145 aa6.26□□□□□ -1.41
HDAC6-207ENST00000430858 SPACA4Q8TDM5 124 aa6.26□□□□□ -1.41
HDAC6-207ENST00000430858 NXT2Q9NPJ8 142 aaKnown RBP6.26□□□□□ -1.41
HDAC6-207ENST00000430858 CARHSP1Q9Y2V2 147 aaKnown RBP6.26□□□□□ -1.41
HDAC6-207ENST00000430858 A0A087WYN8 130 aa6.25□□□□□ -1.41
HDAC6-207ENST00000430858 IFITM10A6NMD0 228 aa6.25□□□□□ -1.41
HDAC6-207ENST00000430858 CHTF8P0CG12 524 aa6.25□□□□□ -1.41
HDAC6-207ENST00000430858 SYCNQ0VAF6 134 aa6.25□□□□□ -1.41
HDAC6-207ENST00000430858 RHEBQ15382 184 aa6.25□□□□□ -1.41
HDAC6-207ENST00000430858 C5orf38Q86SI9 138 aa6.25□□□□□ -1.41
HDAC6-207ENST00000430858 PRSS3P2Q8NHM4 247 aa6.25□□□□□ -1.41
HDAC6-207ENST00000430858 LINC00526Q96FQ7 95 aa6.25□□□□□ -1.41
HDAC6-207ENST00000430858 TMEM141Q96I45 108 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms