RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 PTPRBP23467 1997 aa12.45□□□□□ -0.42
RIF1-204ENST00000430328 PATE2Q6UY27 113 aa12.45□□□□□ -0.42
RIF1-204ENST00000430328 Q6JHZ5 121 aa12.45□□□□□ -0.42
RIF1-204ENST00000430328 C17orf82Q86X59 251 aaPredicted RBP12.45□□□□□ -0.42
RIF1-204ENST00000430328 PLA2G1BP04054 148 aaKnown RBP12.45□□□□□ -0.42
RIF1-204ENST00000430328 SPAG11AQ6PDA7 123 aa12.44□□□□□ -0.42
RIF1-204ENST00000430328 COL11A2P13942 1736 aaPredicted RBP12.44□□□□□ -0.42
RIF1-204ENST00000430328 YPEL4Q96NS1 127 aa12.44□□□□□ -0.42
RIF1-204ENST00000430328 A0A0J9YX75 114 aa12.44□□□□□ -0.42
RIF1-204ENST00000430328 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.44□□□□□ -0.42
RIF1-204ENST00000430328 J3QKU1 62 aa12.44□□□□□ -0.42
RIF1-204ENST00000430328 MYCNOSP40205 109 aa12.44□□□□□ -0.42
RIF1-204ENST00000430328 COL5A3P25940 1745 aaPredicted RBP12.43□□□□□ -0.42
RIF1-204ENST00000430328 RITA1Q96K30 269 aa12.43□□□□□ -0.42
RIF1-204ENST00000430328 COL18A1P39060 1754 aa12.43□□□□□ -0.42
RIF1-204ENST00000430328 CTSZQ9UBR2 303 aa12.43□□□□□ -0.42
RIF1-204ENST00000430328 C19orf71A6NCJ1 209 aa12.43□□□□□ -0.42
RIF1-204ENST00000430328 M0R378 163 aa12.43□□□□□ -0.42
RIF1-204ENST00000430328 LST1O00453 97 aa12.43□□□□□ -0.42
RIF1-204ENST00000430328 BEAN1Q3B7T3 259 aa12.42□□□□□ -0.42
RIF1-204ENST00000430328 TRBV7-7A0A0K0K1E9 115 aa12.42□□□□□ -0.42
RIF1-204ENST00000430328 SYCNQ0VAF6 134 aa12.42□□□□□ -0.42
RIF1-204ENST00000430328 LINC00322Q6ZN03 302 aaPredicted RBP12.42□□□□□ -0.42
RIF1-204ENST00000430328 PYGO1Q9Y3Y4 419 aa12.42□□□□□ -0.42
RIF1-204ENST00000430328 IGLV4-3A0A075B6K6 122 aa12.41□□□□□ -0.42
RIF1-204ENST00000430328 A6NDX4 124 aa12.41□□□□□ -0.42
RIF1-204ENST00000430328 A8MZ25 164 aa12.41□□□□□ -0.42
RIF1-204ENST00000430328 DEFB113Q30KQ7 82 aa12.41□□□□□ -0.42
RIF1-204ENST00000430328 IGFL3Q6UXB1 125 aa12.41□□□□□ -0.42
RIF1-204ENST00000430328 RBX1P62877 108 aa12.41□□□□□ -0.42
RIF1-204ENST00000430328 SMIM11BQ8TCY0 68 aa12.4□□□□□ -0.42
RIF1-204ENST00000430328 ZNF22P17026 224 aaPredicted RBP12.4□□□□□ -0.42
RIF1-204ENST00000430328 TMEM89A2RUT3 159 aa12.4□□□□□ -0.42
RIF1-204ENST00000430328 DNAJC9-AS1A6NH13 148 aa12.4□□□□□ -0.42
RIF1-204ENST00000430328 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.4□□□□□ -0.42
RIF1-204ENST00000430328 COX17Q14061 63 aa12.4□□□□□ -0.42
RIF1-204ENST00000430328 ZNF524Q96C55 264 aa12.4□□□□□ -0.43
RIF1-204ENST00000430328 PROK2Q9HC23 129 aa12.4□□□□□ -0.43
RIF1-204ENST00000430328 ZNF503-AS2A6NEH8 195 aa12.39□□□□□ -0.43
RIF1-204ENST00000430328 HILS1P60008 231 aa12.39□□□□□ -0.43
RIF1-204ENST00000430328 XGP55808 180 aa12.39□□□□□ -0.43
RIF1-204ENST00000430328 SIP14410 1827 aa12.39□□□□□ -0.43
RIF1-204ENST00000430328 CRYGAP11844 174 aa12.39□□□□□ -0.43
RIF1-204ENST00000430328 MAP6D1Q9H9H5 199 aa12.39□□□□□ -0.43
RIF1-204ENST00000430328 KIAA1671Q9BY89 1806 aa12.38□□□□□ -0.43
RIF1-204ENST00000430328 DEFB131BA0A096LNP1 70 aa12.38□□□□□ -0.43
RIF1-204ENST00000430328 ODF3Q96PU9 254 aa12.38□□□□□ -0.43
RIF1-204ENST00000430328 TRBV6-8A0A0A6YYG3 113 aa12.38□□□□□ -0.43
RIF1-204ENST00000430328 DEFB1P60022 68 aa12.38□□□□□ -0.43
RIF1-204ENST00000430328 IGLV3-1P01715 115 aa12.37□□□□□ -0.43
RIF1-204ENST00000430328 SPINK1P00995 79 aa12.37□□□□□ -0.43
RIF1-204ENST00000430328 LINC01547P58512 204 aaPredicted RBP12.37□□□□□ -0.43
RIF1-204ENST00000430328 Q6ZTI0 123 aa12.37□□□□□ -0.43
RIF1-204ENST00000430328 LIMD2Q9BT23 127 aa12.37□□□□□ -0.43
RIF1-204ENST00000430328 CACNA1AO00555 2505 aa12.37□□□□□ -0.43
RIF1-204ENST00000430328 LINC00526Q96FQ7 95 aa12.36□□□□□ -0.43
RIF1-204ENST00000430328 LY6G6EA0A0G2JKS1 128 aa12.36□□□□□ -0.43
RIF1-204ENST00000430328 MAPKAPK5-AS1Q8N8E1 139 aa12.36□□□□□ -0.43
RIF1-204ENST00000430328 KIAA1549LQ6ZVL6 1849 aa12.36□□□□□ -0.43
RIF1-204ENST00000430328 RSPO1Q2MKA7 263 aaPredicted RBP12.35□□□□□ -0.43
RIF1-204ENST00000430328 F8P00451 2351 aa12.35□□□□□ -0.43
RIF1-204ENST00000430328 FRMD6-AS1P0C7T7 363 aa12.35□□□□□ -0.43
RIF1-204ENST00000430328 ODF3L1Q8IXM7 274 aa12.35□□□□□ -0.43
RIF1-204ENST00000430328 SPINT4Q6UDR6 99 aa12.35□□□□□ -0.43
RIF1-204ENST00000430328 TP53TG3Q9ULZ0 132 aa12.35□□□□□ -0.43
RIF1-204ENST00000430328 PRO0628Q9UI54 55 aa12.34□□□□□ -0.43
RIF1-204ENST00000430328 TP73-AS1Q9UF72 201 aa12.34□□□□□ -0.43
RIF1-204ENST00000430328 LINC00474Q9P2X8 69 aa12.34□□□□□ -0.43
RIF1-204ENST00000430328 RPL37AP8A6NKH3 93 aa12.34□□□□□ -0.43
RIF1-204ENST00000430328 H0Y9P7 68 aa12.34□□□□□ -0.43
RIF1-204ENST00000430328 LOC100131303A0A0U1RQF7 123 aa12.33□□□□□ -0.43
RIF1-204ENST00000430328 NOTCH4Q99466 2003 aa12.33□□□□□ -0.44
RIF1-204ENST00000430328 IGLV4-69A0A075B6H9 119 aa12.33□□□□□ -0.44
RIF1-204ENST00000430328 CXCL6P80162 114 aa12.33□□□□□ -0.44
RIF1-204ENST00000430328 PLAC8L1A1L4L8 177 aa12.32□□□□□ -0.44
RIF1-204ENST00000430328 NTM-AS1Q6ZSK4 140 aa12.32□□□□□ -0.44
RIF1-204ENST00000430328 C11orf53Q8IXP5 236 aa12.32□□□□□ -0.44
RIF1-204ENST00000430328 UNQ9165/PRO28630Q6UXU0 137 aa12.32□□□□□ -0.44
RIF1-204ENST00000430328 LOC107984640A0A0U1RRK4 108 aa12.32□□□□□ -0.44
RIF1-204ENST00000430328 PCOTHQ58A44 107 aa12.32□□□□□ -0.44
RIF1-204ENST00000430328 ZNF73O43830 326 aaPredicted RBP12.31□□□□□ -0.44
RIF1-204ENST00000430328 CD164L2Q6UWJ8 174 aa12.31□□□□□ -0.44
RIF1-204ENST00000430328 CIRBP-AS1Q8TBR5 109 aa12.31□□□□□ -0.44
RIF1-204ENST00000430328 TNS1Q9HBL0 1735 aaKnown RBP12.31□□□□□ -0.44
RIF1-204ENST00000430328 LINC01548A6NM66 108 aa12.3□□□□□ -0.44
RIF1-204ENST00000430328 IGHV6-1A0A0B4J1U7 121 aa12.29□□□□□ -0.44
RIF1-204ENST00000430328 MUC7Q8TAX7 377 aa12.29□□□□□ -0.44
RIF1-204ENST00000430328 LRP4O75096 1905 aa12.29□□□□□ -0.44
RIF1-204ENST00000430328 hDV103S1A0JD37 113 aa12.28□□□□□ -0.44
RIF1-204ENST00000430328 WDR90Q96KV7 1748 aa12.28□□□□□ -0.44
RIF1-204ENST00000430328 ZNF80P51504 273 aaPredicted RBP12.28□□□□□ -0.44
RIF1-204ENST00000430328 PTPRSQ13332 1948 aa12.28□□□□□ -0.44
RIF1-204ENST00000430328 RNASE3P12724 160 aaKnown RBP12.28□□□□□ -0.44
RIF1-204ENST00000430328 TMEM254Q8TBM7 123 aa12.28□□□□□ -0.44
RIF1-204ENST00000430328 PLA2G2EQ9NZK7 142 aa12.27□□□□□ -0.44
RIF1-204ENST00000430328 C1orf137Q5JT78 98 aa12.27□□□□□ -0.44
RIF1-204ENST00000430328 Q8N3U1 123 aa12.27□□□□□ -0.45
RIF1-204ENST00000430328 A0A1B0GU69 56 aa12.27□□□□□ -0.45
RIF1-204ENST00000430328 M0QY20 66 aa12.27□□□□□ -0.45
RIF1-204ENST00000430328 FAM215AQ9Y5M1 114 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms