RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 IGKV4-1P06312 121 aa9.52□□□□□ -0.89
PTCH1-207ENST00000429896 LECT2O14960 151 aa9.51□□□□□ -0.89
PTCH1-207ENST00000429896 SPANXA1Q9NS26 97 aa9.51□□□□□ -0.89
PTCH1-207ENST00000429896 A0A0J9YWU9 116 aa9.51□□□□□ -0.89
PTCH1-207ENST00000429896 HCFC1P51610 2035 aa9.51□□□□□ -0.89
PTCH1-207ENST00000429896 A0A1B0GX51 115 aa9.51□□□□□ -0.89
PTCH1-207ENST00000429896 HRCT1Q6UXD1 115 aa9.51□□□□□ -0.89
PTCH1-207ENST00000429896 TANC2Q9HCD6 1990 aa9.51□□□□□ -0.89
PTCH1-207ENST00000429896 IGLV2-18A0A075B6J9 118 aa9.51□□□□□ -0.89
PTCH1-207ENST00000429896 G3V4G9 280 aa9.51□□□□□ -0.89
PTCH1-207ENST00000429896 TDRG1Q3Y452 100 aa9.5□□□□□ -0.89
PTCH1-207ENST00000429896 SVIPQ8NHG7 77 aa9.5□□□□□ -0.89
PTCH1-207ENST00000429896 HIGD2AQ9BW72 106 aa9.5□□□□□ -0.89
PTCH1-207ENST00000429896 TRBV10-1A0A0K0K1A3 114 aa9.5□□□□□ -0.89
PTCH1-207ENST00000429896 SIVA1O15304 175 aa9.5□□□□□ -0.89
PTCH1-207ENST00000429896 TMEM258P61165 79 aa9.49□□□□□ -0.89
PTCH1-207ENST00000429896 ANKRD39Q53RE8 183 aa9.49□□□□□ -0.89
PTCH1-207ENST00000429896 MIR7-3HGQ8N6C7 128 aa9.49□□□□□ -0.89
PTCH1-207ENST00000429896 ZNF292O60281 2723 aa9.49□□□□□ -0.89
PTCH1-207ENST00000429896 NOTCH3Q9UM47 2321 aa9.48□□□□□ -0.89
PTCH1-207ENST00000429896 SCXQ7RTU7 201 aa9.48□□□□□ -0.89
PTCH1-207ENST00000429896 LINC00269Q8N2A0 174 aa9.48□□□□□ -0.89
PTCH1-207ENST00000429896 A0A1B0GXF2 115 aa9.48□□□□□ -0.89
PTCH1-207ENST00000429896 KLLNB2CW77 178 aa9.48□□□□□ -0.89
PTCH1-207ENST00000429896 MRPS12O15235 138 aaKnown RBP9.47□□□□□ -0.89
PTCH1-207ENST00000429896 LINC01545Q5VT33 79 aa9.47□□□□□ -0.89
PTCH1-207ENST00000429896 MLST8Q9BVC4 326 aa9.47□□□□□ -0.89
PTCH1-207ENST00000429896 MP68P56378 58 aa9.47□□□□□ -0.89
PTCH1-207ENST00000429896 RETNQ9HD89 108 aa9.47□□□□□ -0.89
PTCH1-207ENST00000429896 CDH23Q9H251 3354 aa9.47□□□□□ -0.89
PTCH1-207ENST00000429896 NFE4Q86UQ8 179 aa9.47□□□□□ -0.89
PTCH1-207ENST00000429896 FOXI1Q12951 378 aa9.47□□□□□ -0.89
PTCH1-207ENST00000429896 LINC00322Q6ZN03 302 aaPredicted RBP9.47□□□□□ -0.89
PTCH1-207ENST00000429896 DIRC1Q969H9 104 aa9.47□□□□□ -0.89
PTCH1-207ENST00000429896 SONP18583 2426 aaKnown RBP9.46□□□□□ -0.89
PTCH1-207ENST00000429896 A0A087WZ39 114 aa9.46□□□□□ -0.89
PTCH1-207ENST00000429896 FAM236AA0A1B0GUQ0 79 aa9.46□□□□□ -0.89
PTCH1-207ENST00000429896 FAM236BA0A1B0GV22 79 aa9.46□□□□□ -0.89
PTCH1-207ENST00000429896 Q6ZUT4 128 aa9.46□□□□□ -0.9
PTCH1-207ENST00000429896 PKIGQ9Y2B9 76 aa9.46□□□□□ -0.9
PTCH1-207ENST00000429896 IGLV2-11P01706 119 aa9.46□□□□□ -0.9
PTCH1-207ENST00000429896 FXYD2P54710 66 aa9.46□□□□□ -0.9
PTCH1-207ENST00000429896 FHL3Q13643 280 aa9.46□□□□□ -0.9
PTCH1-207ENST00000429896 B9D2Q9BPU9 175 aa9.46□□□□□ -0.9
PTCH1-207ENST00000429896 CFAP126Q5VTH2 177 aa9.45□□□□□ -0.9
PTCH1-207ENST00000429896 FAM19A5Q7Z5A7 132 aaPredicted RBP9.45□□□□□ -0.9
PTCH1-207ENST00000429896 IGLC6P0CF74 106 aa9.45□□□□□ -0.9
PTCH1-207ENST00000429896 PRR9Q5T870 116 aa9.45□□□□□ -0.9
PTCH1-207ENST00000429896 ABCA2Q9BZC7 2435 aa9.45□□□□□ -0.9
PTCH1-207ENST00000429896 SLPIP03973 132 aa9.44□□□□□ -0.9
PTCH1-207ENST00000429896 NANOS2P60321 138 aaKnown RBP9.44□□□□□ -0.9
PTCH1-207ENST00000429896 WFDC2Q14508 124 aa9.44□□□□□ -0.9
PTCH1-207ENST00000429896 U3KQK5 164 aa9.44□□□□□ -0.9
PTCH1-207ENST00000429896 A0A0B4J2C4 111 aa9.44□□□□□ -0.9
PTCH1-207ENST00000429896 CRYGDP07320 174 aa9.44□□□□□ -0.9
PTCH1-207ENST00000429896 FAM19A1Q7Z5A9 133 aa9.44□□□□□ -0.9
PTCH1-207ENST00000429896 DSCAML1Q8TD84 2053 aa9.44□□□□□ -0.9
PTCH1-207ENST00000429896 KRTAP1-1Q07627 177 aa9.44□□□□□ -0.9
PTCH1-207ENST00000429896 SEC61GP60059 68 aa9.43□□□□□ -0.9
PTCH1-207ENST00000429896 PRUNE2Q8WUY3 3088 aa9.43□□□□□ -0.9
PTCH1-207ENST00000429896 NHLRC4P0CG21 123 aaPredicted RBP9.43□□□□□ -0.9
PTCH1-207ENST00000429896 CRIP1P50238 77 aa9.43□□□□□ -0.9
PTCH1-207ENST00000429896 TRBV6-4A0A1B0GX49 114 aa9.43□□□□□ -0.9
PTCH1-207ENST00000429896 TOMM6Q96B49 74 aa9.43□□□□□ -0.9
PTCH1-207ENST00000429896 C11orf86A6NJI1 115 aa9.43□□□□□ -0.9
PTCH1-207ENST00000429896 PTH2Q96A98 100 aa9.42□□□□□ -0.9
PTCH1-207ENST00000429896 SPANXDQ9BXN6 97 aa9.42□□□□□ -0.9
PTCH1-207ENST00000429896 PPDPFQ9H3Y8 114 aa9.42□□□□□ -0.9
PTCH1-207ENST00000429896 NUPR2A6NF83 97 aa9.42□□□□□ -0.9
PTCH1-207ENST00000429896 TRAV23DV6A0A075B6W5 121 aa9.42□□□□□ -0.9
PTCH1-207ENST00000429896 LINC00526Q96FQ7 95 aa9.41□□□□□ -0.9
PTCH1-207ENST00000429896 CASC2Q6XLA1 102 aa9.41□□□□□ -0.9
PTCH1-207ENST00000429896 WFDC10BQ8IUB3 73 aa9.41□□□□□ -0.9
PTCH1-207ENST00000429896 MPLKIPQ8TAP9 179 aa9.41□□□□□ -0.9
PTCH1-207ENST00000429896 BEAN1Q3B7T3 259 aa9.41□□□□□ -0.9
PTCH1-207ENST00000429896 SPTSSBQ8NFR3 76 aa9.41□□□□□ -0.9
PTCH1-207ENST00000429896 COX7BP24311 80 aa9.4□□□□□ -0.9
PTCH1-207ENST00000429896 PRM2P04554 102 aa9.4□□□□□ -0.91
PTCH1-207ENST00000429896 REG3AQ06141 175 aa9.4□□□□□ -0.91
PTCH1-207ENST00000429896 KPRPQ5T749 579 aaPredicted RBP9.4□□□□□ -0.91
PTCH1-207ENST00000429896 SPINK6Q6UWN8 80 aa9.4□□□□□ -0.91
PTCH1-207ENST00000429896 WNK1Q9H4A3 2382 aa9.39□□□□□ -0.91
PTCH1-207ENST00000429896 LINC01620Q4KN68 170 aa9.39□□□□□ -0.91
PTCH1-207ENST00000429896 ANKRD17O75179 2603 aaKnown RBP9.39□□□□□ -0.91
PTCH1-207ENST00000429896 H0YGX0 51 aa9.39□□□□□ -0.91
PTCH1-207ENST00000429896 NEXN-AS1Q8NBZ9 246 aa9.39□□□□□ -0.91
PTCH1-207ENST00000429896 TNCP24821 2201 aa9.38□□□□□ -0.91
PTCH1-207ENST00000429896 C9orf85Q96MD7 179 aa9.38□□□□□ -0.91
PTCH1-207ENST00000429896 LY6G6CO95867 125 aa9.38□□□□□ -0.91
PTCH1-207ENST00000429896 RNASE3P12724 160 aaKnown RBP9.38□□□□□ -0.91
PTCH1-207ENST00000429896 C11orf21Q9P2W6 132 aa9.38□□□□□ -0.91
PTCH1-207ENST00000429896 XAGE1AQ9HD64 81 aa9.38□□□□□ -0.91
PTCH1-207ENST00000429896 POLQO75417 2590 aa9.38□□□□□ -0.91
PTCH1-207ENST00000429896 SMIM20Q8N5G0 67 aa9.37□□□□□ -0.91
PTCH1-207ENST00000429896 C1orf158Q8N1D5 194 aa9.37□□□□□ -0.91
PTCH1-207ENST00000429896 SZT2Q5T011 3432 aa9.37□□□□□ -0.91
PTCH1-207ENST00000429896 TRBV10-2A0A0K0K1G8 114 aa9.37□□□□□ -0.91
PTCH1-207ENST00000429896 LINC00467Q9BRT7 94 aa9.37□□□□□ -0.91
PTCH1-207ENST00000429896 IGKV2-28A0A075B6P5 120 aa9.36□□□□□ -0.91
PTCH1-207ENST00000429896 IGKV2D-28P01615 120 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 395.6 ms