RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 FAM30AQ9NZY2 134 aa11.35□□□□□ -0.59
CTSD-203ENST00000429746 HLA-DQA1P01909 254 aa11.34□□□□□ -0.59
CTSD-203ENST00000429746 RNASEKQ6P5S7 137 aaKnown RBP11.34□□□□□ -0.59
CTSD-203ENST00000429746 ORMDL3Q8N138 153 aa11.34□□□□□ -0.59
CTSD-203ENST00000429746 CLRN3Q8NCR9 226 aa11.34□□□□□ -0.59
CTSD-203ENST00000429746 CDC42SE2Q9NRR3 84 aa11.34□□□□□ -0.59
CTSD-203ENST00000429746 UBE2D4Q9Y2X8 147 aa11.34□□□□□ -0.59
CTSD-203ENST00000429746 PRSS1P07477 247 aa11.33□□□□□ -0.6
CTSD-203ENST00000429746 LINC01620Q4KN68 170 aa11.33□□□□□ -0.6
CTSD-203ENST00000429746 AMMECR1LQ6DCA0 310 aa11.33□□□□□ -0.6
CTSD-203ENST00000429746 Q6ZSA8 131 aa11.33□□□□□ -0.6
CTSD-203ENST00000429746 PRELID3AQ96N28 172 aa11.33□□□□□ -0.6
CTSD-203ENST00000429746 TRAV9-1A0A075B6T8 112 aa11.32□□□□□ -0.6
CTSD-203ENST00000429746 EPM2AB3EWF7 344 aa11.32□□□□□ -0.6
CTSD-203ENST00000429746 OR5A1Q8NGJ0 315 aa11.32□□□□□ -0.6
CTSD-203ENST00000429746 KIR2DL4Q99706 377 aa11.32□□□□□ -0.6
CTSD-203ENST00000429746 CSDC2Q9Y534 153 aaKnown RBP11.32□□□□□ -0.6
CTSD-203ENST00000429746 FCER1GP30273 86 aa11.31□□□□□ -0.6
CTSD-203ENST00000429746 RPL39P62891 51 aaKnown RBP11.31□□□□□ -0.6
CTSD-203ENST00000429746 TCAPO15273 167 aa11.3□□□□□ -0.6
CTSD-203ENST00000429746 SLPIP03973 132 aa11.3□□□□□ -0.6
CTSD-203ENST00000429746 RHEBQ15382 184 aa11.3□□□□□ -0.6
CTSD-203ENST00000429746 C15orf56Q8N910 161 aa11.3□□□□□ -0.6
CTSD-203ENST00000429746 CHCHD10Q8WYQ3 142 aaPredicted RBP11.3□□□□□ -0.6
CTSD-203ENST00000429746 IGKV3OR2-268A0A0C4DH90 116 aa11.29□□□□□ -0.6
CTSD-203ENST00000429746 LINC00959A0A1B0GUT2 108 aa11.29□□□□□ -0.6
CTSD-203ENST00000429746 GAGE12HA6NDE8 117 aa11.29□□□□□ -0.6
CTSD-203ENST00000429746 FOXI1Q12951 378 aa11.29□□□□□ -0.6
CTSD-203ENST00000429746 ZNF664Q8N3J9 261 aa11.29□□□□□ -0.6
CTSD-203ENST00000429746 TIMM21Q9BVV7 248 aa11.29□□□□□ -0.6
CTSD-203ENST00000429746 LAMTOR2Q9Y2Q5 125 aa11.29□□□□□ -0.6
CTSD-203ENST00000429746 HAMPP81172 84 aa11.28□□□□□ -0.6
CTSD-203ENST00000429746 Q6ZUT4 128 aa11.28□□□□□ -0.6
CTSD-203ENST00000429746 KIAA1644Q3SXP7 199 aa11.26□□□□□ -0.61
CTSD-203ENST00000429746 C14orf177Q52M58 125 aa11.26□□□□□ -0.61
CTSD-203ENST00000429746 RNASE13Q5GAN3 156 aaKnown RBP11.26□□□□□ -0.61
CTSD-203ENST00000429746 TMEM101Q96IK0 257 aa11.26□□□□□ -0.61
CTSD-203ENST00000429746 RPS10P5Q9NQ39 176 aa11.26□□□□□ -0.61
CTSD-203ENST00000429746 APOC3P02656 99 aa11.25□□□□□ -0.61
CTSD-203ENST00000429746 Q8N8P6 123 aa11.25□□□□□ -0.61
CTSD-203ENST00000429746 YPEL4Q96NS1 127 aa11.25□□□□□ -0.61
CTSD-203ENST00000429746 OPRPNQ99935 248 aaPredicted RBP11.25□□□□□ -0.61
CTSD-203ENST00000429746 GNB1LQ9BYB4 327 aa11.25□□□□□ -0.61
CTSD-203ENST00000429746 LOC389332A0A1B0GUA5 103 aa11.24□□□□□ -0.61
CTSD-203ENST00000429746 CCL25O15444 150 aa11.24□□□□□ -0.61
CTSD-203ENST00000429746 CNBPP62633 177 aaKnown RBP11.24□□□□□ -0.61
CTSD-203ENST00000429746 DGAT2L7PQ6IED9 249 aa11.23□□□□□ -0.61
CTSD-203ENST00000429746 C9orf163Q8N9P6 203 aa11.23□□□□□ -0.61
CTSD-203ENST00000429746 MAP1LC3AQ9H492 121 aa11.23□□□□□ -0.61
CTSD-203ENST00000429746 TGIF2-C20orf24A0A0A6YYL0 155 aa11.22□□□□□ -0.61
CTSD-203ENST00000429746 S100PP25815 95 aa11.22□□□□□ -0.61
CTSD-203ENST00000429746 XCL1P47992 114 aa11.22□□□□□ -0.61
CTSD-203ENST00000429746 MRPS36P82909 103 aaKnown RBP11.22□□□□□ -0.61
CTSD-203ENST00000429746 Q5VSD8 79 aa11.22□□□□□ -0.61
CTSD-203ENST00000429746 SPANXA1Q9NS26 97 aa11.22□□□□□ -0.61
CTSD-203ENST00000429746 SRRM2Q9UQ35 2752 aaKnown RBP11.22□□□□□ -0.61
CTSD-203ENST00000429746 GVQW2A0A096LPI5 108 aaPredicted RBP11.21□□□□□ -0.61
CTSD-203ENST00000429746 FAM229AH3BQW9 127 aa11.21□□□□□ -0.61
CTSD-203ENST00000429746 INAFM2P0DMQ5 153 aa11.21□□□□□ -0.61
CTSD-203ENST00000429746 CD164L2Q6UWJ8 174 aa11.21□□□□□ -0.61
CTSD-203ENST00000429746 ALKBH7Q9BT30 221 aaPredicted RBP11.21□□□□□ -0.61
CTSD-203ENST00000429746 PYGO1Q9Y3Y4 419 aa11.21□□□□□ -0.61
CTSD-203ENST00000429746 PANO1I0J062 215 aa11.2□□□□□ -0.62
CTSD-203ENST00000429746 IFI27P40305 119 aaPredicted RBP11.2□□□□□ -0.62
CTSD-203ENST00000429746 SVBPQ8N300 66 aa11.2□□□□□ -0.62
CTSD-203ENST00000429746 TMEM18Q96B42 140 aa11.2□□□□□ -0.62
CTSD-203ENST00000429746 IGLV4-3A0A075B6K6 122 aa11.19□□□□□ -0.62
CTSD-203ENST00000429746 hDV102S1A0JD36 115 aa11.19□□□□□ -0.62
CTSD-203ENST00000429746 LINC01546A6NGU7 62 aa11.19□□□□□ -0.62
CTSD-203ENST00000429746 SNAPINO95295 136 aa11.19□□□□□ -0.62
CTSD-203ENST00000429746 SDIM1Q6ZPB5 146 aa11.19□□□□□ -0.62
CTSD-203ENST00000429746 SLC7A5P1Q8MH63 180 aa11.19□□□□□ -0.62
CTSD-203ENST00000429746 DMBT1Q9UGM3 2413 aaPredicted RBP11.19□□□□□ -0.62
CTSD-203ENST00000429746 RAB5AP20339 215 aa11.18□□□□□ -0.62
CTSD-203ENST00000429746 SS18Q15532 418 aa11.18□□□□□ -0.62
CTSD-203ENST00000429746 HIGD2BQ4VC39 106 aa11.18□□□□□ -0.62
CTSD-203ENST00000429746 LINC00173Q6ZV60 143 aa11.18□□□□□ -0.62
CTSD-203ENST00000429746 SCXQ7RTU7 201 aa11.18□□□□□ -0.62
CTSD-203ENST00000429746 MRPL18Q9H0U6 180 aaKnown RBP11.18□□□□□ -0.62
CTSD-203ENST00000429746 TRAV13-1A0A0B4J241 112 aa11.17□□□□□ -0.62
CTSD-203ENST00000429746 IGIPA6NJ69 53 aa11.17□□□□□ -0.62
CTSD-203ENST00000429746 C1orf196B1AJZ1 125 aa11.17□□□□□ -0.62
CTSD-203ENST00000429746 K7EMI3 77 aa11.17□□□□□ -0.62
CTSD-203ENST00000429746 SMR3BP02814 79 aaPredicted RBP11.17□□□□□ -0.62
CTSD-203ENST00000429746 MT-ND6P03923 174 aa11.17□□□□□ -0.62
CTSD-203ENST00000429746 SMAGPQ0VAQ4 97 aa11.17□□□□□ -0.62
CTSD-203ENST00000429746 COX19Q49B96 90 aa11.17□□□□□ -0.62
CTSD-203ENST00000429746 C2orf66Q6UXQ4 117 aa11.17□□□□□ -0.62
CTSD-203ENST00000429746 NXT2Q9NPJ8 142 aaKnown RBP11.17□□□□□ -0.62
CTSD-203ENST00000429746 MYCBP2O75592 4640 aa11.17□□□□□ -0.62
CTSD-203ENST00000429746 FLG2Q5D862 2391 aaPredicted RBP11.17□□□□□ -0.62
CTSD-203ENST00000429746 CHAC1Q9BUX1 264 aa11.16□□□□□ -0.62
CTSD-203ENST00000429746 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.16□□□□□ -0.62
CTSD-203ENST00000429746 IGHV3OR16-9A0A0B4J2B5 98 aa11.15□□□□□ -0.62
CTSD-203ENST00000429746 CIRBPQ14011 172 aaKnown RBP11.15□□□□□ -0.62
CTSD-203ENST00000429746 ORMDL2Q53FV1 153 aa11.15□□□□□ -0.62
CTSD-203ENST00000429746 CIRBP-AS1Q8TBR5 109 aa11.15□□□□□ -0.62
CTSD-203ENST00000429746 URB1-AS1Q96HZ7 61 aa11.15□□□□□ -0.62
CTSD-203ENST00000429746 IGHV1-58A0A0C4DH39 117 aa11.14□□□□□ -0.63
CTSD-203ENST00000429746 NDUFA5Q16718 116 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms