RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 NUPR1O60356 82 aa12.5□□□□□ -0.41
SMARCA4-203ENST00000429416 CRYBA4P53673 196 aa12.5□□□□□ -0.41
SMARCA4-203ENST00000429416 C9orf153Q5TBE3 101 aa12.5□□□□□ -0.41
SMARCA4-203ENST00000429416 INAFM2P0DMQ5 153 aa12.5□□□□□ -0.41
SMARCA4-203ENST00000429416 RNASE3P12724 160 aaKnown RBP12.5□□□□□ -0.41
SMARCA4-203ENST00000429416 MRGPRG-AS1Q2M3A8 158 aa12.5□□□□□ -0.41
SMARCA4-203ENST00000429416 LELP1Q5T871 98 aa12.5□□□□□ -0.41
SMARCA4-203ENST00000429416 TTTY13Q9BZ97 58 aa12.5□□□□□ -0.41
SMARCA4-203ENST00000429416 TRAV12-1A0A0B4J245 112 aa12.49□□□□□ -0.41
SMARCA4-203ENST00000429416 IGHV1-58A0A0C4DH39 117 aa12.49□□□□□ -0.41
SMARCA4-203ENST00000429416 MIAQ16674 131 aa12.49□□□□□ -0.41
SMARCA4-203ENST00000429416 CHD7Q9P2D1 2997 aa12.49□□□□□ -0.41
SMARCA4-203ENST00000429416 TRBV20-1A0A075B6N2 111 aa12.49□□□□□ -0.41
SMARCA4-203ENST00000429416 NDUFS5O43920 106 aa12.48□□□□□ -0.41
SMARCA4-203ENST00000429416 CFC1BP0CG36 223 aa12.48□□□□□ -0.41
SMARCA4-203ENST00000429416 CFC1P0CG37 223 aa12.48□□□□□ -0.41
SMARCA4-203ENST00000429416 C7orf33Q8WU49 177 aa12.48□□□□□ -0.41
SMARCA4-203ENST00000429416 B9D2Q9BPU9 175 aa12.48□□□□□ -0.41
SMARCA4-203ENST00000429416 C11orf21Q9P2W6 132 aa12.48□□□□□ -0.41
SMARCA4-203ENST00000429416 UFSP1Q6NVU6 142 aa12.48□□□□□ -0.41
SMARCA4-203ENST00000429416 FAM19A5Q7Z5A7 132 aaPredicted RBP12.48□□□□□ -0.41
SMARCA4-203ENST00000429416 SYCNQ0VAF6 134 aa12.48□□□□□ -0.41
SMARCA4-203ENST00000429416 LINC00526Q96FQ7 95 aa12.47□□□□□ -0.41
SMARCA4-203ENST00000429416 H7C423 109 aa12.47□□□□□ -0.41
SMARCA4-203ENST00000429416 ANKRD39Q53RE8 183 aa12.47□□□□□ -0.41
SMARCA4-203ENST00000429416 ORMDL1Q9P0S3 153 aa12.47□□□□□ -0.41
SMARCA4-203ENST00000429416 UBL5Q9BZL1 73 aa12.47□□□□□ -0.41
SMARCA4-203ENST00000429416 IGLV2-11P01706 119 aa12.46□□□□□ -0.41
SMARCA4-203ENST00000429416 ZNF580Q9UK33 172 aa12.46□□□□□ -0.41
SMARCA4-203ENST00000429416 A4D1N5 150 aa12.46□□□□□ -0.41
SMARCA4-203ENST00000429416 DIRC1Q969H9 104 aa12.46□□□□□ -0.41
SMARCA4-203ENST00000429416 XAGE1AQ9HD64 81 aa12.46□□□□□ -0.41
SMARCA4-203ENST00000429416 CDKN2A-AS1Q9UH64 79 aa12.46□□□□□ -0.41
SMARCA4-203ENST00000429416 A0A1B0GXF2 115 aa12.45□□□□□ -0.42
SMARCA4-203ENST00000429416 A0A096LNI7 61 aa12.45□□□□□ -0.42
SMARCA4-203ENST00000429416 LINC01545Q5VT33 79 aa12.45□□□□□ -0.42
SMARCA4-203ENST00000429416 C12orf74Q32Q52 190 aa12.44□□□□□ -0.42
SMARCA4-203ENST00000429416 FUSP35637 526 aaKnown RBP eCLIP12.44□□□□□ -0.42
SMARCA4-203ENST00000429416 NHLRC4P0CG21 123 aaPredicted RBP12.43□□□□□ -0.42
SMARCA4-203ENST00000429416 C21orf62-AS1Q17RA5 79 aa12.43□□□□□ -0.42
SMARCA4-203ENST00000429416 TDRG1Q3Y452 100 aa12.43□□□□□ -0.42
SMARCA4-203ENST00000429416 FAM19A1Q7Z5A9 133 aa12.43□□□□□ -0.42
SMARCA4-203ENST00000429416 C5orf42Q9H799 3197 aa12.43□□□□□ -0.42
SMARCA4-203ENST00000429416 E9PLD3 99 aa12.42□□□□□ -0.42
SMARCA4-203ENST00000429416 ODF1Q14990 250 aa12.42□□□□□ -0.42
SMARCA4-203ENST00000429416 C1orf158Q8N1D5 194 aa12.42□□□□□ -0.42
SMARCA4-203ENST00000429416 IGLV4-3A0A075B6K6 122 aa12.41□□□□□ -0.42
SMARCA4-203ENST00000429416 Q6ZVH6 145 aa12.41□□□□□ -0.42
SMARCA4-203ENST00000429416 C9orf85Q96MD7 179 aa12.41□□□□□ -0.42
SMARCA4-203ENST00000429416 BAALC-AS2P0C853 105 aa12.41□□□□□ -0.42
SMARCA4-203ENST00000429416 TET2Q6N021 2002 aaPredicted RBP12.41□□□□□ -0.42
SMARCA4-203ENST00000429416 TNRC6BQ9UPQ9 1833 aaKnown RBP12.41□□□□□ -0.42
SMARCA4-203ENST00000429416 HELZ2Q9BYK8 2649 aaKnown RBP12.41□□□□□ -0.42
SMARCA4-203ENST00000429416 C9orf118A6NHY6 69 aa12.4□□□□□ -0.42
SMARCA4-203ENST00000429416 H0YGX0 51 aa12.4□□□□□ -0.42
SMARCA4-203ENST00000429416 Q8N2B8 174 aa12.4□□□□□ -0.42
SMARCA4-203ENST00000429416 HTTP42858 3142 aa12.38□□□□□ -0.43
SMARCA4-203ENST00000429416 LAMA3Q16787 3333 aa12.38□□□□□ -0.43
SMARCA4-203ENST00000429416 MGAM2Q2M2H8 2515 aa12.37□□□□□ -0.43
SMARCA4-203ENST00000429416 H3BMG7 143 aa12.37□□□□□ -0.43
SMARCA4-203ENST00000429416 CD164L2Q6UWJ8 174 aa12.37□□□□□ -0.43
SMARCA4-203ENST00000429416 MKI67P46013 3256 aaKnown RBP12.37□□□□□ -0.43
SMARCA4-203ENST00000429416 FHL3Q13643 280 aa12.37□□□□□ -0.43
SMARCA4-203ENST00000429416 RNF185Q96GF1 192 aa12.36□□□□□ -0.43
SMARCA4-203ENST00000429416 COX7BP24311 80 aa12.36□□□□□ -0.43
SMARCA4-203ENST00000429416 TRBV27A0A0K0K1C4 114 aa12.35□□□□□ -0.43
SMARCA4-203ENST00000429416 ETDBQ3ZM63 59 aa12.35□□□□□ -0.43
SMARCA4-203ENST00000429416 COA6Q5JTJ3 125 aaKnown RBP12.35□□□□□ -0.43
SMARCA4-203ENST00000429416 MRPS12O15235 138 aaKnown RBP12.35□□□□□ -0.43
SMARCA4-203ENST00000429416 A0A0C4DFX4 3053 aa12.35□□□□□ -0.43
SMARCA4-203ENST00000429416 LINC00959A0A1B0GUT2 108 aa12.34□□□□□ -0.43
SMARCA4-203ENST00000429416 TRACP01848 142 aa12.34□□□□□ -0.43
SMARCA4-203ENST00000429416 UBE2D3P61077 147 aa12.34□□□□□ -0.43
SMARCA4-203ENST00000429416 UBE2D2P62837 147 aa12.34□□□□□ -0.43
SMARCA4-203ENST00000429416 TSHBP01222 138 aa12.34□□□□□ -0.43
SMARCA4-203ENST00000429416 UBE2V1Q13404 147 aa12.33□□□□□ -0.43
SMARCA4-203ENST00000429416 NDUFB1O75438 58 aa12.33□□□□□ -0.44
SMARCA4-203ENST00000429416 TRBV6-5A0A0K0K1A5 114 aa12.33□□□□□ -0.44
SMARCA4-203ENST00000429416 SIGMAR1Q99720 223 aa12.33□□□□□ -0.44
SMARCA4-203ENST00000429416 A0A1W2PPM0 123 aa12.32□□□□□ -0.44
SMARCA4-203ENST00000429416 IGLV4-69A0A075B6H9 119 aa12.32□□□□□ -0.44
SMARCA4-203ENST00000429416 IGKV2-28A0A075B6P5 120 aa12.32□□□□□ -0.44
SMARCA4-203ENST00000429416 IGKV2D-28P01615 120 aa12.32□□□□□ -0.44
SMARCA4-203ENST00000429416 ZNF22P17026 224 aaPredicted RBP12.32□□□□□ -0.44
SMARCA4-203ENST00000429416 C1orf134Q5TEV5 83 aa12.32□□□□□ -0.44
SMARCA4-203ENST00000429416 UBE2D1P51668 147 aa12.31□□□□□ -0.44
SMARCA4-203ENST00000429416 RNASE8Q8TDE3 154 aaKnown RBP12.31□□□□□ -0.44
SMARCA4-203ENST00000429416 NTN5Q8WTR8 489 aaPredicted RBP12.31□□□□□ -0.44
SMARCA4-203ENST00000429416 FOXI1Q12951 378 aa12.3□□□□□ -0.44
SMARCA4-203ENST00000429416 USP24Q9UPU5 2620 aa12.3□□□□□ -0.44
SMARCA4-203ENST00000429416 MRPL52Q86TS9 123 aaKnown RBP12.3□□□□□ -0.44
SMARCA4-203ENST00000429416 IGLV5-52A0A0A0MRZ9 124 aa12.29□□□□□ -0.44
SMARCA4-203ENST00000429416 A0A0J9YXY3 114 aa12.29□□□□□ -0.44
SMARCA4-203ENST00000429416 SPANXCQ9NY87 97 aa12.29□□□□□ -0.44
SMARCA4-203ENST00000429416 FHL2Q14192 279 aa12.29□□□□□ -0.44
SMARCA4-203ENST00000429416 ANKRD29Q8N6D5 301 aa12.29□□□□□ -0.44
SMARCA4-203ENST00000429416 DLEU1O43261 78 aa12.29□□□□□ -0.44
SMARCA4-203ENST00000429416 ANAPC13Q9BS18 74 aa12.29□□□□□ -0.44
SMARCA4-203ENST00000429416 CITED1Q99966 193 aa12.28□□□□□ -0.44
SMARCA4-203ENST00000429416 PCSK5Q92824 1860 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms