RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 TMEM86BQ8N661 226 aa6.06□□□□□ -1.44
CD44-208ENST00000428726 MT-ATP8P03928 68 aa6.06□□□□□ -1.44
CD44-208ENST00000428726 LINC00694P0DN24 101 aa6.06□□□□□ -1.44
CD44-208ENST00000428726 FHL3Q13643 280 aa6.06□□□□□ -1.44
CD44-208ENST00000428726 TAL2Q16559 108 aa6.06□□□□□ -1.44
CD44-208ENST00000428726 C1orf158Q8N1D5 194 aa6.06□□□□□ -1.44
CD44-208ENST00000428726 TMEM141Q96I45 108 aa6.06□□□□□ -1.44
CD44-208ENST00000428726 PAPPA-AS1Q5QFB9 102 aa6.05□□□□□ -1.44
CD44-208ENST00000428726 LINC00467Q9BRT7 94 aa6.05□□□□□ -1.44
CD44-208ENST00000428726 VCX2Q9H322 139 aa6.05□□□□□ -1.44
CD44-208ENST00000428726 IGLV4-69A0A075B6H9 119 aa6.05□□□□□ -1.44
CD44-208ENST00000428726 IGIPA6NJ69 53 aa6.05□□□□□ -1.44
CD44-208ENST00000428726 A8MTW9 85 aa6.05□□□□□ -1.44
CD44-208ENST00000428726 HTN3P15516 51 aa6.05□□□□□ -1.44
CD44-208ENST00000428726 TIMM17AQ99595 171 aa6.05□□□□□ -1.44
CD44-208ENST00000428726 TCL1BO95988 128 aa6.04□□□□□ -1.44
CD44-208ENST00000428726 CFAP126Q5VTH2 177 aa6.04□□□□□ -1.44
CD44-208ENST00000428726 DGAT2L7PQ6IED9 249 aa6.04□□□□□ -1.44
CD44-208ENST00000428726 Q6ZUT4 128 aa6.04□□□□□ -1.44
CD44-208ENST00000428726 F8W1H4 67 aa6.04□□□□□ -1.44
CD44-208ENST00000428726 PMVKQ15126 192 aa6.04□□□□□ -1.44
CD44-208ENST00000428726 RHOHQ15669 191 aa6.04□□□□□ -1.44
CD44-208ENST00000428726 TMEM238LA0A1B0GVL6 79 aa6.04□□□□□ -1.44
CD44-208ENST00000428726 BAHCC1Q9P281 2608 aa6.03□□□□□ -1.44
CD44-208ENST00000428726 EIF4EBP3O60516 100 aaPredicted RBP6.03□□□□□ -1.44
CD44-208ENST00000428726 A0A0J9YY99 117 aa6.03□□□□□ -1.44
CD44-208ENST00000428726 A4D1N5 150 aa6.03□□□□□ -1.44
CD44-208ENST00000428726 C9JAW5 83 aa6.03□□□□□ -1.44
CD44-208ENST00000428726 CFC1BP0CG36 223 aa6.03□□□□□ -1.44
CD44-208ENST00000428726 CFC1P0CG37 223 aa6.03□□□□□ -1.44
CD44-208ENST00000428726 I3L3M4 83 aa6.02□□□□□ -1.45
CD44-208ENST00000428726 J3QR89 54 aa6.02□□□□□ -1.45
CD44-208ENST00000428726 INSP01308 110 aa6.02□□□□□ -1.45
CD44-208ENST00000428726 LGALS3P17931 250 aaKnown RBP6.02□□□□□ -1.45
CD44-208ENST00000428726 CKS1BP61024 79 aa6.02□□□□□ -1.45
CD44-208ENST00000428726 HERVK_113P61574 105 aa6.02□□□□□ -1.45
CD44-208ENST00000428726 PRO0461Q9UI25 63 aa6.02□□□□□ -1.45
CD44-208ENST00000428726 IGLV4-3A0A075B6K6 122 aa6.02□□□□□ -1.45
CD44-208ENST00000428726 M0R2P5 195 aa6.02□□□□□ -1.45
CD44-208ENST00000428726 FOXI1Q12951 378 aa6.02□□□□□ -1.45
CD44-208ENST00000428726 PIK3CD-AS1Q5SR53 167 aa6.02□□□□□ -1.45
CD44-208ENST00000428726 Q8N3U1 123 aa6.02□□□□□ -1.45
CD44-208ENST00000428726 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.02□□□□□ -1.45
CD44-208ENST00000428726 C20orf203Q8NBC4 194 aa6.02□□□□□ -1.45
CD44-208ENST00000428726 EDA2RQ9HAV5 297 aa6.02□□□□□ -1.45
CD44-208ENST00000428726 TOMM7Q9P0U1 55 aa6.02□□□□□ -1.45
CD44-208ENST00000428726 PRB2P02812 416 aaPredicted RBP6.01□□□□□ -1.45
CD44-208ENST00000428726 XGP55808 180 aa6.01□□□□□ -1.45
CD44-208ENST00000428726 NDUFA11Q86Y39 141 aa6.01□□□□□ -1.45
CD44-208ENST00000428726 TENM2Q9NT68 2774 aa6.01□□□□□ -1.45
CD44-208ENST00000428726 A8MWV9 139 aa6.01□□□□□ -1.45
CD44-208ENST00000428726 J3QQQ9 107 aa6.01□□□□□ -1.45
CD44-208ENST00000428726 COX6A2Q02221 97 aa6.01□□□□□ -1.45
CD44-208ENST00000428726 ZNF415Q09FC8 603 aa6.01□□□□□ -1.45
CD44-208ENST00000428726 GAGE6Q13070 117 aa6.01□□□□□ -1.45
CD44-208ENST00000428726 SLC25A29Q8N8R3 303 aa6.01□□□□□ -1.45
CD44-208ENST00000428726 TRAV26-1A0A087WT03 109 aa6.01□□□□□ -1.45
CD44-208ENST00000428726 DEFB135Q30KP9 77 aa6.01□□□□□ -1.45
CD44-208ENST00000428726 MUSTN1Q8IVN3 82 aa6.01□□□□□ -1.45
CD44-208ENST00000428726 C11orf72Q8NBR9 251 aa6.01□□□□□ -1.45
CD44-208ENST00000428726 ANK2Q01484 3957 aa6.01□□□□□ -1.45
CD44-208ENST00000428726 TRBV20-1A0A075B6N2 111 aa6□□□□□ -1.45
CD44-208ENST00000428726 A0A1B0GV72 72 aa6□□□□□ -1.45
CD44-208ENST00000428726 CARD19Q96LW7 228 aa6□□□□□ -1.45
CD44-208ENST00000428726 TRAV25A0A0B4J276 109 aa6□□□□□ -1.45
CD44-208ENST00000428726 CRLF1O75462 422 aa6□□□□□ -1.45
CD44-208ENST00000428726 GIG44P09565 113 aaPredicted RBP6□□□□□ -1.45
CD44-208ENST00000428726 ANKRD29Q8N6D5 301 aa6□□□□□ -1.45
CD44-208ENST00000428726 C3orf56Q8N813 242 aa6□□□□□ -1.45
CD44-208ENST00000428726 CDKN2A-AS1Q9UH64 79 aa6□□□□□ -1.45
CD44-208ENST00000428726 ZNF22P17026 224 aaPredicted RBP5.99□□□□□ -1.45
CD44-208ENST00000428726 TRGV4A0A0C4DH28 118 aa5.99□□□□□ -1.45
CD44-208ENST00000428726 TMEM262E9PQX1 116 aa5.99□□□□□ -1.45
CD44-208ENST00000428726 TEX49A0A1B0GTD5 131 aa5.99□□□□□ -1.45
CD44-208ENST00000428726 ADAMTSL4-AS1Q5T5F5 129 aa5.99□□□□□ -1.45
CD44-208ENST00000428726 FAM104AQ969W3 186 aa5.99□□□□□ -1.45
CD44-208ENST00000428726 DNAJC30Q96LL9 226 aa5.99□□□□□ -1.45
CD44-208ENST00000428726 CDIP1Q9H305 208 aa5.99□□□□□ -1.45
CD44-208ENST00000428726 IGLV10-54A0A075B6I4 117 aa5.98□□□□□ -1.45
CD44-208ENST00000428726 IGHV3-30P01768 117 aa5.98□□□□□ -1.45
CD44-208ENST00000428726 IGHV3-30-5P0DP03 117 aa5.98□□□□□ -1.45
CD44-208ENST00000428726 C1QTNF4Q9BXJ3 329 aa5.98□□□□□ -1.45
CD44-208ENST00000428726 GEMIN7Q9H840 131 aaKnown RBP5.98□□□□□ -1.45
CD44-208ENST00000428726 RHODO00212 210 aa5.98□□□□□ -1.45
CD44-208ENST00000428726 NTM-AS1Q6ZSK4 140 aa5.98□□□□□ -1.45
CD44-208ENST00000428726 C10orf126Q8N4M7 172 aa5.98□□□□□ -1.45
CD44-208ENST00000428726 NTN5Q8WTR8 489 aaPredicted RBP5.98□□□□□ -1.45
CD44-208ENST00000428726 CLEC2BQ92478 149 aa5.98□□□□□ -1.45
CD44-208ENST00000428726 PRO1854Q9UHT4 67 aa5.98□□□□□ -1.45
CD44-208ENST00000428726 IGHV3-30-3P0DP02 117 aa5.97□□□□□ -1.45
CD44-208ENST00000428726 FAM110AQ9BQ89 295 aa5.97□□□□□ -1.45
CD44-208ENST00000428726 CHCHD7Q9BUK0 85 aa5.97□□□□□ -1.45
CD44-208ENST00000428726 PYGO1Q9Y3Y4 419 aa5.97□□□□□ -1.45
CD44-208ENST00000428726 UBE2D1P51668 147 aa5.97□□□□□ -1.45
CD44-208ENST00000428726 LINC00526Q96FQ7 95 aa5.97□□□□□ -1.45
CD44-208ENST00000428726 CRYBA4P53673 196 aa5.96□□□□□ -1.45
CD44-208ENST00000428726 BEAN1Q3B7T3 259 aa5.96□□□□□ -1.45
CD44-208ENST00000428726 C5orf38Q86SI9 138 aa5.96□□□□□ -1.45
CD44-208ENST00000428726 CHCHD5Q9BSY4 110 aa5.96□□□□□ -1.45
CD44-208ENST00000428726 TIMM21Q9BVV7 248 aa5.96□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms