RNA–Protein interactions for RNA: ENST00000428549.8

ABCA8-202, Transcript of ATP binding cassette subfamily A member 8, humanhuman

TSL 1 (best)

Gene ABCA8, Length 1,622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8-202ENST00000428549 FAM223AQ8IWN6 122 aa6.46□□□□□ -1.38
ABCA8-202ENST00000428549 TSKUQ8WUA8 353 aa6.46□□□□□ -1.38
ABCA8-202ENST00000428549 UPK3BQ9BT76 320 aa6.46□□□□□ -1.38
ABCA8-202ENST00000428549 ZNF492Q9P255 531 aa6.46□□□□□ -1.38
ABCA8-202ENST00000428549 IGKV1D-37A0A075B6S9 117 aa6.45□□□□□ -1.38
ABCA8-202ENST00000428549 TCRBV4S1A1TA0A5B7 111 aa6.45□□□□□ -1.38
ABCA8-202ENST00000428549 RNASE1P07998 156 aaKnown RBP6.45□□□□□ -1.38
ABCA8-202ENST00000428549 LINC01554Q52M75 96 aa6.45□□□□□ -1.38
ABCA8-202ENST00000428549 CYP2G1PQ6ZSU1 146 aa6.45□□□□□ -1.38
ABCA8-202ENST00000428549 TMEM256Q8N2U0 113 aa6.45□□□□□ -1.38
ABCA8-202ENST00000428549 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.45□□□□□ -1.38
ABCA8-202ENST00000428549 C11orf52Q96A22 123 aa6.45□□□□□ -1.38
ABCA8-202ENST00000428549 MANBALQ9NQG1 85 aa6.45□□□□□ -1.38
ABCA8-202ENST00000428549 MRPL36Q9P0J6 103 aaKnown RBP6.45□□□□□ -1.38
ABCA8-202ENST00000428549 COL6A5A8TX70 2615 aa6.44□□□□□ -1.38
ABCA8-202ENST00000428549 CUBNO60494 3623 aa6.44□□□□□ -1.38
ABCA8-202ENST00000428549 TRAV2A0A0B4J234 112 aa6.44□□□□□ -1.38
ABCA8-202ENST00000428549 TIMM17BO60830 172 aa6.44□□□□□ -1.38
ABCA8-202ENST00000428549 IGLV1-40P01703 118 aa6.44□□□□□ -1.38
ABCA8-202ENST00000428549 KRTAP24-1Q3LI83 254 aa6.44□□□□□ -1.38
ABCA8-202ENST00000428549 USMG5Q96IX5 58 aa6.44□□□□□ -1.38
ABCA8-202ENST00000428549 SCRT2Q9NQ03 307 aa6.44□□□□□ -1.38
ABCA8-202ENST00000428549 ZNF355PQ9NSJ1 428 aa6.44□□□□□ -1.38
ABCA8-202ENST00000428549 DKK2Q9UBU2 259 aa6.44□□□□□ -1.38
ABCA8-202ENST00000428549 TRBV7-1A0A0A6YYK4 115 aa6.43□□□□□ -1.38
ABCA8-202ENST00000428549 IGHV3-21A0A0B4J1V1 117 aa6.43□□□□□ -1.38
ABCA8-202ENST00000428549 LTAP01374 205 aa6.43□□□□□ -1.38
ABCA8-202ENST00000428549 IGHV3-48P01763 117 aa6.43□□□□□ -1.38
ABCA8-202ENST00000428549 TRGV3P03979 118 aa6.43□□□□□ -1.38
ABCA8-202ENST00000428549 REG3AQ06141 175 aa6.43□□□□□ -1.38
ABCA8-202ENST00000428549 C15orf32Q32M92 178 aa6.43□□□□□ -1.38
ABCA8-202ENST00000428549 C5orf38Q86SI9 138 aa6.43□□□□□ -1.38
ABCA8-202ENST00000428549 DIRC1Q969H9 104 aa6.43□□□□□ -1.38
ABCA8-202ENST00000428549 MSRB1Q9NZV6 116 aa6.43□□□□□ -1.38
ABCA8-202ENST00000428549 CTXND1A0A1B0GTU2 59 aa6.43□□□□□ -1.38
ABCA8-202ENST00000428549 IGKV1-17P01599 117 aa6.43□□□□□ -1.38
ABCA8-202ENST00000428549 PRM2P04554 102 aa6.43□□□□□ -1.38
ABCA8-202ENST00000428549 FBN1P35555 2871 aaKnown RBP6.42□□□□□ -1.38
ABCA8-202ENST00000428549 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.42□□□□□ -1.38
ABCA8-202ENST00000428549 C9JCJ5 164 aa6.42□□□□□ -1.38
ABCA8-202ENST00000428549 C3orf79P0CE67 100 aa6.42□□□□□ -1.38
ABCA8-202ENST00000428549 RNASE4P34096 147 aaKnown RBP6.42□□□□□ -1.38
ABCA8-202ENST00000428549 TWIST1Q15672 202 aa6.42□□□□□ -1.38
ABCA8-202ENST00000428549 SCXQ7RTU7 201 aa6.42□□□□□ -1.38
ABCA8-202ENST00000428549 IGHV1OR15-1A0A075B7D0 117 aa6.41□□□□□ -1.38
ABCA8-202ENST00000428549 UBE2G1P62253 170 aa6.41□□□□□ -1.38
ABCA8-202ENST00000428549 SERP2Q8N6R1 65 aa6.41□□□□□ -1.38
ABCA8-202ENST00000428549 SLC25A29Q8N8R3 303 aa6.41□□□□□ -1.38
ABCA8-202ENST00000428549 ODF3Q96PU9 254 aa6.41□□□□□ -1.38
ABCA8-202ENST00000428549 Q9H3A6 140 aa6.41□□□□□ -1.38
ABCA8-202ENST00000428549 IL36BQ9NZH7 164 aa6.41□□□□□ -1.38
ABCA8-202ENST00000428549 CTSGP08311 255 aa6.4□□□□□ -1.38
ABCA8-202ENST00000428549 COX8AP10176 69 aa6.4□□□□□ -1.38
ABCA8-202ENST00000428549 HIST1H4AP62805 103 aaKnown RBP6.4□□□□□ -1.38
ABCA8-202ENST00000428549 Q8N8P6 123 aa6.4□□□□□ -1.38
ABCA8-202ENST00000428549 CYB561D1Q8N8Q1 229 aa6.4□□□□□ -1.38
ABCA8-202ENST00000428549 LINC01600Q96MT4 127 aa6.4□□□□□ -1.38
ABCA8-202ENST00000428549 KLK15Q9H2R5 256 aa6.4□□□□□ -1.38
ABCA8-202ENST00000428549 S4R3C0 116 aa6.4□□□□□ -1.38
ABCA8-202ENST00000428549 K7EQD1 137 aa6.39□□□□□ -1.39
ABCA8-202ENST00000428549 IGHV3-23P01764 117 aa6.39□□□□□ -1.39
ABCA8-202ENST00000428549 C10orf113Q5VZT2 155 aa6.39□□□□□ -1.39
ABCA8-202ENST00000428549 C2orf91Q6ZV80 131 aa6.39□□□□□ -1.39
ABCA8-202ENST00000428549 LYZP61626 148 aa6.39□□□□□ -1.39
ABCA8-202ENST00000428549 NXT2Q9NPJ8 142 aaKnown RBP6.39□□□□□ -1.39
ABCA8-202ENST00000428549 BMPR1BO00238 502 aa6.38□□□□□ -1.39
ABCA8-202ENST00000428549 SERF1AO75920 110 aa6.38□□□□□ -1.39
ABCA8-202ENST00000428549 IGLV2-8P01709 118 aa6.38□□□□□ -1.39
ABCA8-202ENST00000428549 IL4P05112 153 aa6.38□□□□□ -1.39
ABCA8-202ENST00000428549 UBE2AP49459 152 aa6.38□□□□□ -1.39
ABCA8-202ENST00000428549 PATE2Q6UY27 113 aa6.38□□□□□ -1.39
ABCA8-202ENST00000428549 TRAPPC1Q9Y5R8 145 aa6.38□□□□□ -1.39
ABCA8-202ENST00000428549 LY96Q9Y6Y9 160 aa6.38□□□□□ -1.39
ABCA8-202ENST00000428549 IGLV5-45A0A087WSX0 123 aa6.37□□□□□ -1.39
ABCA8-202ENST00000428549 H3BRN7 92 aa6.37□□□□□ -1.39
ABCA8-202ENST00000428549 FUSP35637 526 aaKnown RBP eCLIP6.37□□□□□ -1.39
ABCA8-202ENST00000428549 C10orf99Q6UWK7 81 aa6.37□□□□□ -1.39
ABCA8-202ENST00000428549 MIR17HGQ75NE6 70 aa6.37□□□□□ -1.39
ABCA8-202ENST00000428549 LINC01006Q8NI28 216 aa6.37□□□□□ -1.39
ABCA8-202ENST00000428549 ZNF414Q96IQ9 312 aa6.37□□□□□ -1.39
ABCA8-202ENST00000428549 ARL2-SNX15V9GYD0 113 aa6.37□□□□□ -1.39
ABCA8-202ENST00000428549 CLPSL1A2RUU4 121 aa6.36□□□□□ -1.39
ABCA8-202ENST00000428549 NDUFA4O00483 81 aa6.36□□□□□ -1.39
ABCA8-202ENST00000428549 IGHV3-11P01762 117 aa6.36□□□□□ -1.39
ABCA8-202ENST00000428549 ARL14EPLP0DKL9 152 aa6.36□□□□□ -1.39
ABCA8-202ENST00000428549 GCHFRP30047 84 aa6.36□□□□□ -1.39
ABCA8-202ENST00000428549 LINC00310P59036 64 aa6.36□□□□□ -1.39
ABCA8-202ENST00000428549 CIRBPQ14011 172 aaKnown RBP6.36□□□□□ -1.39
ABCA8-202ENST00000428549 FAM167A-AS1Q96KT0 104 aa6.36□□□□□ -1.39
ABCA8-202ENST00000428549 SLC25A2Q9BXI2 301 aa6.36□□□□□ -1.39
ABCA8-202ENST00000428549 TMEM167BQ9NRX6 74 aa6.36□□□□□ -1.39
ABCA8-202ENST00000428549 STAB1Q9NY15 2570 aa6.36□□□□□ -1.39
ABCA8-202ENST00000428549 HERVK_113P61574 105 aa6.36□□□□□ -1.39
ABCA8-202ENST00000428549 TMEM61Q8N0U2 210 aa6.36□□□□□ -1.39
ABCA8-202ENST00000428549 TMEM14CQ9P0S9 112 aa6.36□□□□□ -1.39
ABCA8-202ENST00000428549 HIGD1BQ9P298 99 aa6.36□□□□□ -1.39
ABCA8-202ENST00000428549 GNG13Q9P2W3 67 aa6.36□□□□□ -1.39
ABCA8-202ENST00000428549 TP53TG3Q9ULZ0 132 aa6.36□□□□□ -1.39
ABCA8-202ENST00000428549 K7EQG2 157 aa6.35□□□□□ -1.39
ABCA8-202ENST00000428549 ADAMTSL4-AS1Q5T5F5 129 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms