RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 NDUFA1O15239 70 aa3.76□□□□□ -1.81
RIF1-203ENST00000428287 CYSTM1Q9H1C7 97 aa3.76□□□□□ -1.81
RIF1-203ENST00000428287 IGHV3-35A0A0C4DH35 117 aa3.76□□□□□ -1.81
RIF1-203ENST00000428287 OR13C6PQ8NH95 151 aa3.76□□□□□ -1.81
RIF1-203ENST00000428287 PIMREGQ9BSJ6 248 aa3.76□□□□□ -1.81
RIF1-203ENST00000428287 IGHG2P01859 326 aa3.75□□□□□ -1.81
RIF1-203ENST00000428287 RPL28P46779 137 aaKnown RBP3.75□□□□□ -1.81
RIF1-203ENST00000428287 SUMO4Q6EEV6 95 aa3.75□□□□□ -1.81
RIF1-203ENST00000428287 LINC01561Q8N1V8 128 aa3.75□□□□□ -1.81
RIF1-203ENST00000428287 DPH3Q96FX2 82 aa3.75□□□□□ -1.81
RIF1-203ENST00000428287 NDUFC2-KCTD14E9PQ53 114 aa3.75□□□□□ -1.81
RIF1-203ENST00000428287 OXTP01178 125 aa3.75□□□□□ -1.81
RIF1-203ENST00000428287 SS18Q15532 418 aa3.75□□□□□ -1.81
RIF1-203ENST00000428287 C16orf92Q96LL3 132 aa3.75□□□□□ -1.81
RIF1-203ENST00000428287 PF4V1P10720 104 aa3.75□□□□□ -1.81
RIF1-203ENST00000428287 GAGE2AQ6NT46 116 aa3.75□□□□□ -1.81
RIF1-203ENST00000428287 FAM19A3Q7Z5A8 133 aa3.75□□□□□ -1.81
RIF1-203ENST00000428287 C20orf173Q96LM9 149 aa3.75□□□□□ -1.81
RIF1-203ENST00000428287 TRAV8-3A0A0A6YYJ7 113 aa3.75□□□□□ -1.81
RIF1-203ENST00000428287 NDUFA4O00483 81 aa3.75□□□□□ -1.81
RIF1-203ENST00000428287 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.75□□□□□ -1.81
RIF1-203ENST00000428287 GNRH2O43555 120 aa3.74□□□□□ -1.81
RIF1-203ENST00000428287 BCE1O60756 84 aa3.74□□□□□ -1.81
RIF1-203ENST00000428287 JPT2Q9H910 190 aa3.74□□□□□ -1.81
RIF1-203ENST00000428287 ZNF625Q96I27 306 aaPredicted RBP3.74□□□□□ -1.81
RIF1-203ENST00000428287 K7EMT4 169 aa3.74□□□□□ -1.81
RIF1-203ENST00000428287 UCNP55089 124 aa3.74□□□□□ -1.81
RIF1-203ENST00000428287 Q8N2B8 174 aa3.74□□□□□ -1.81
RIF1-203ENST00000428287 LINC00308Q8TCZ7 52 aa3.74□□□□□ -1.81
RIF1-203ENST00000428287 IGHV3OR16-8A0A075B7F1 116 aa3.74□□□□□ -1.81
RIF1-203ENST00000428287 TGFAP01135 160 aa3.74□□□□□ -1.81
RIF1-203ENST00000428287 COX7A1P24310 79 aa3.74□□□□□ -1.81
RIF1-203ENST00000428287 KLKP1Q107X0 134 aa3.73□□□□□ -1.81
RIF1-203ENST00000428287 SOSTDC1Q6X4U4 206 aa3.73□□□□□ -1.81
RIF1-203ENST00000428287 KLK5Q9Y337 293 aaPredicted RBP3.73□□□□□ -1.81
RIF1-203ENST00000428287 COPS9Q8WXC6 57 aa3.73□□□□□ -1.81
RIF1-203ENST00000428287 CLEC2BQ92478 149 aa3.73□□□□□ -1.81
RIF1-203ENST00000428287 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.73□□□□□ -1.81
RIF1-203ENST00000428287 RPL11P62913 178 aaKnown RBP3.73□□□□□ -1.81
RIF1-203ENST00000428287 HIST2H2BCQ6DN03 193 aa3.73□□□□□ -1.81
RIF1-203ENST00000428287 HIST2H2BDQ6DRA6 164 aa3.73□□□□□ -1.81
RIF1-203ENST00000428287 UNQ9165/PRO28630Q6UXU0 137 aa3.73□□□□□ -1.81
RIF1-203ENST00000428287 CDKN2A-AS1Q9UH64 79 aa3.73□□□□□ -1.81
RIF1-203ENST00000428287 IGHV3-53P01767 116 aa3.73□□□□□ -1.81
RIF1-203ENST00000428287 CIRBPQ14011 172 aaKnown RBP3.73□□□□□ -1.81
RIF1-203ENST00000428287 EEF1AKMT3Q96AZ1 226 aa3.73□□□□□ -1.81
RIF1-203ENST00000428287 ATP6V0E1O15342 81 aa3.73□□□□□ -1.81
RIF1-203ENST00000428287 C5orf56Q8N8D9 126 aa3.73□□□□□ -1.81
RIF1-203ENST00000428287 USMG5Q96IX5 58 aa3.73□□□□□ -1.81
RIF1-203ENST00000428287 H7C2G1 150 aa3.72□□□□□ -1.81
RIF1-203ENST00000428287 NDUFC2O95298 119 aa3.72□□□□□ -1.81
RIF1-203ENST00000428287 PSMB8P28062 276 aa3.72□□□□□ -1.81
RIF1-203ENST00000428287 OPRPNQ99935 248 aaPredicted RBP3.72□□□□□ -1.81
RIF1-203ENST00000428287 IGHV3-16A0A0C4DH30 117 aa3.72□□□□□ -1.81
RIF1-203ENST00000428287 hADV29S1A0JD25 119 aa3.72□□□□□ -1.81
RIF1-203ENST00000428287 IGHV4-39P01824 125 aa3.72□□□□□ -1.81
RIF1-203ENST00000428287 Q5XG85 94 aa3.72□□□□□ -1.81
RIF1-203ENST00000428287 TRBV10-3A0A0K0K1G6 114 aa3.72□□□□□ -1.81
RIF1-203ENST00000428287 C3orf56Q8N813 242 aa3.72□□□□□ -1.81
RIF1-203ENST00000428287 FAM223BA6NKX1 122 aa3.72□□□□□ -1.81
RIF1-203ENST00000428287 FAM223AQ8IWN6 122 aa3.72□□□□□ -1.81
RIF1-203ENST00000428287 KIR2DL5BQ8NHK3 375 aa3.72□□□□□ -1.81
RIF1-203ENST00000428287 BEX4Q9NWD9 120 aaPredicted RBP3.72□□□□□ -1.81
RIF1-203ENST00000428287 Q6ZSV7 163 aa3.72□□□□□ -1.81
RIF1-203ENST00000428287 IGHV3OR16-12A0A075B7B8 117 aa3.71□□□□□ -1.81
RIF1-203ENST00000428287 SPRY2O43597 315 aa3.71□□□□□ -1.81
RIF1-203ENST00000428287 PRB3Q04118 309 aaPredicted RBP3.71□□□□□ -1.81
RIF1-203ENST00000428287 H3BUA1 57 aa3.71□□□□□ -1.82
RIF1-203ENST00000428287 Q6JHZ5 121 aa3.71□□□□□ -1.82
RIF1-203ENST00000428287 F5H768 121 aa3.71□□□□□ -1.82
RIF1-203ENST00000428287 G3V318 75 aa3.71□□□□□ -1.82
RIF1-203ENST00000428287 DMBT1Q9UGM3 2413 aaPredicted RBP3.71□□□□□ -1.82
RIF1-203ENST00000428287 BAALC-AS2P0C853 105 aa3.71□□□□□ -1.82
RIF1-203ENST00000428287 CLEC19AQ6UXS0 136 aa3.71□□□□□ -1.82
RIF1-203ENST00000428287 LINC00846Q9NV44 126 aa3.71□□□□□ -1.82
RIF1-203ENST00000428287 IGHV3-49A0A0A0MS15 119 aa3.71□□□□□ -1.82
RIF1-203ENST00000428287 TRAV12-2A0A075B6T6 113 aa3.7□□□□□ -1.82
RIF1-203ENST00000428287 IGHV3OR16-13A0A075B7E8 117 aa3.7□□□□□ -1.82
RIF1-203ENST00000428287 IGHV3-74A0A0B4J1X5 117 aa3.7□□□□□ -1.82
RIF1-203ENST00000428287 SIRPDQ9H106 197 aa3.7□□□□□ -1.82
RIF1-203ENST00000428287 USP17L23D6RBM5 183 aa3.7□□□□□ -1.82
RIF1-203ENST00000428287 MGPP08493 103 aa3.7□□□□□ -1.82
RIF1-203ENST00000428287 Q1RN00 199 aa3.7□□□□□ -1.82
RIF1-203ENST00000428287 ATP5EP2Q5VTU8 51 aa3.7□□□□□ -1.82
RIF1-203ENST00000428287 K7EQG2 157 aa3.7□□□□□ -1.82
RIF1-203ENST00000428287 LINC00242Q5T6M2 205 aa3.7□□□□□ -1.82
RIF1-203ENST00000428287 C11orf71Q6IPW1 123 aa3.7□□□□□ -1.82
RIF1-203ENST00000428287 H0YGX0 51 aa3.7□□□□□ -1.82
RIF1-203ENST00000428287 H7BZZ5 65 aa3.7□□□□□ -1.82
RIF1-203ENST00000428287 FAM218AQ96MZ4 157 aa3.7□□□□□ -1.82
RIF1-203ENST00000428287 OVOL2Q9BRP0 275 aa3.7□□□□□ -1.82
RIF1-203ENST00000428287 ADARB2-AS1A8MUL3 147 aa3.7□□□□□ -1.82
RIF1-203ENST00000428287 PRIMA1Q86XR5 153 aa3.7□□□□□ -1.82
RIF1-203ENST00000428287 LINC00337Q8N6G1 96 aa3.7□□□□□ -1.82
RIF1-203ENST00000428287 Q8NA96 180 aa3.7□□□□□ -1.82
RIF1-203ENST00000428287 A0A087WWL8 130 aa3.69□□□□□ -1.82
RIF1-203ENST00000428287 SMIM1B2RUZ4 78 aa3.69□□□□□ -1.82
RIF1-203ENST00000428287 LYNX1G3V0Z9 82 aa3.69□□□□□ -1.82
RIF1-203ENST00000428287 LYNX1P0DP58 116 aa3.69□□□□□ -1.82
RIF1-203ENST00000428287 Q9UF83 564 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms