RNA–Protein interactions for RNA: ENST00000428101.6

LMO1-202, Transcript of LIM domain only 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LMO1, Length 1,038 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-202ENST00000428101 LINC00959A0A1B0GUT2 108 aa17.25■□□□□ 0.35
LMO1-202ENST00000428101 ISOC2Q96AB3 205 aa17.25■□□□□ 0.35
LMO1-202ENST00000428101 XCL1P47992 114 aa17.24■□□□□ 0.35
LMO1-202ENST00000428101 PRSS3P2Q8NHM4 247 aa17.24■□□□□ 0.35
LMO1-202ENST00000428101 PLAC8Q9NZF1 115 aa17.24■□□□□ 0.35
LMO1-202ENST00000428101 SMKR1H3BMG3 65 aa17.23■□□□□ 0.35
LMO1-202ENST00000428101 RIGQ13278 110 aa17.23■□□□□ 0.35
LMO1-202ENST00000428101 TMEM241Q24JQ0 296 aa17.23■□□□□ 0.35
LMO1-202ENST00000428101 MRPL52Q86TS9 123 aaKnown RBP17.23■□□□□ 0.35
LMO1-202ENST00000428101 CDC42SE2Q9NRR3 84 aa17.23■□□□□ 0.35
LMO1-202ENST00000428101 C9JQL5 133 aa17.22■□□□□ 0.35
LMO1-202ENST00000428101 CCL25O15444 150 aa17.22■□□□□ 0.35
LMO1-202ENST00000428101 RPL23P62829 140 aaKnown RBP17.22■□□□□ 0.35
LMO1-202ENST00000428101 PEA15Q15121 130 aa17.21■□□□□ 0.35
LMO1-202ENST00000428101 SERTAD4-AS1Q5TG53 156 aa17.21■□□□□ 0.35
LMO1-202ENST00000428101 HMCN2Q8NDA2 5059 aa17.2■□□□□ 0.34
LMO1-202ENST00000428101 C7orf77A4D0Y5 90 aa17.2■□□□□ 0.34
LMO1-202ENST00000428101 FAM74A3Q4VXF1 159 aa17.2■□□□□ 0.34
LMO1-202ENST00000428101 NRACQ8N912 160 aa17.2■□□□□ 0.34
LMO1-202ENST00000428101 VCYO14598 125 aa17.19■□□□□ 0.34
LMO1-202ENST00000428101 ZNF664Q8N3J9 261 aa17.19■□□□□ 0.34
LMO1-202ENST00000428101 SMDT1Q9H4I9 107 aa17.19■□□□□ 0.34
LMO1-202ENST00000428101 NAT8BQ9UHF3 227 aa17.19■□□□□ 0.34
LMO1-202ENST00000428101 IGHV1-58A0A0C4DH39 117 aa17.17■□□□□ 0.34
LMO1-202ENST00000428101 IGKV2-24A0A0C4DH68 120 aa17.17■□□□□ 0.34
LMO1-202ENST00000428101 SS18Q15532 418 aa17.17■□□□□ 0.34
LMO1-202ENST00000428101 MAJINQ3KP22 176 aa17.17■□□□□ 0.34
LMO1-202ENST00000428101 LINC00526Q96FQ7 95 aa17.17■□□□□ 0.34
LMO1-202ENST00000428101 RAB14P61106 215 aa17.16■□□□□ 0.34
LMO1-202ENST00000428101 SUMO2P61956 95 aaKnown RBP17.16■□□□□ 0.34
LMO1-202ENST00000428101 SRSF3P84103 164 aaKnown RBP17.16■□□□□ 0.34
LMO1-202ENST00000428101 ADIRFQ15847 76 aa17.16■□□□□ 0.34
LMO1-202ENST00000428101 CD164L2Q6UWJ8 174 aa17.16■□□□□ 0.34
LMO1-202ENST00000428101 Q6ZRU5 148 aa17.16■□□□□ 0.34
LMO1-202ENST00000428101 SMIM27A0A1W2PRY6 76 aa17.15■□□□□ 0.34
LMO1-202ENST00000428101 PHOX2AO14813 284 aa17.15■□□□□ 0.34
LMO1-202ENST00000428101 PPP1R17O96001 155 aa17.15■□□□□ 0.34
LMO1-202ENST00000428101 NAT8Q9UHE5 227 aa17.15■□□□□ 0.34
LMO1-202ENST00000428101 A0A096LNI7 61 aa17.14■□□□□ 0.33
LMO1-202ENST00000428101 FCER1GP30273 86 aa17.14■□□□□ 0.33
LMO1-202ENST00000428101 MRPL51Q4U2R6 128 aaKnown RBP17.14■□□□□ 0.33
LMO1-202ENST00000428101 FAM104BQ5XKR9 115 aa17.14■□□□□ 0.33
LMO1-202ENST00000428101 UBE2D4Q9Y2X8 147 aa17.13■□□□□ 0.33
LMO1-202ENST00000428101 CSDC2Q9Y534 153 aaKnown RBP17.13■□□□□ 0.33
LMO1-202ENST00000428101 MT1HL1P0DM35 61 aa17.12■□□□□ 0.33
LMO1-202ENST00000428101 STPG4Q8N801 248 aa17.12■□□□□ 0.33
LMO1-202ENST00000428101 C7orf33Q8WU49 177 aa17.11■□□□□ 0.33
LMO1-202ENST00000428101 KIR2DL4Q99706 377 aa17.11■□□□□ 0.33
LMO1-202ENST00000428101 PPP1R2P9O14990 202 aa17.1■□□□□ 0.33
LMO1-202ENST00000428101 CAMPP49913 170 aa17.1■□□□□ 0.33
LMO1-202ENST00000428101 CARD19Q96LW7 228 aa17.1■□□□□ 0.33
LMO1-202ENST00000428101 RNASE13Q5GAN3 156 aaKnown RBP17.09■□□□□ 0.33
LMO1-202ENST00000428101 LINC00862A6NCI5 91 aa17.08■□□□□ 0.32
LMO1-202ENST00000428101 C1orf196B1AJZ1 125 aa17.08■□□□□ 0.32
LMO1-202ENST00000428101 TRBV24-1A0A075B6N3 115 aa17.07■□□□□ 0.32
LMO1-202ENST00000428101 ZNF561-AS1K7EIQ3 104 aa17.07■□□□□ 0.32
LMO1-202ENST00000428101 C20orf78Q9BR46 151 aa17.07■□□□□ 0.32
LMO1-202ENST00000428101 A0A1B0GW15 77 aa17.06■□□□□ 0.32
LMO1-202ENST00000428101 SYCNQ0VAF6 134 aa17.06■□□□□ 0.32
LMO1-202ENST00000428101 SMAGPQ0VAQ4 97 aa17.06■□□□□ 0.32
LMO1-202ENST00000428101 CLLU1Q5K131 121 aa17.06■□□□□ 0.32
LMO1-202ENST00000428101 LINC00474Q9P2X8 69 aa17.06■□□□□ 0.32
LMO1-202ENST00000428101 RPL32P62910 135 aaKnown RBP17.05■□□□□ 0.32
LMO1-202ENST00000428101 IFITM2Q01629 132 aa17.05■□□□□ 0.32
LMO1-202ENST00000428101 COX7A2LO14548 114 aa17.04■□□□□ 0.32
LMO1-202ENST00000428101 CKS2P33552 79 aa17.04■□□□□ 0.32
LMO1-202ENST00000428101 Q6ZUT4 128 aa17.04■□□□□ 0.32
LMO1-202ENST00000428101 TIMM21Q9BVV7 248 aa17.04■□□□□ 0.32
LMO1-202ENST00000428101 PLA2G2DQ9UNK4 145 aa17.04■□□□□ 0.32
LMO1-202ENST00000428101 PKIGQ9Y2B9 76 aa17.04■□□□□ 0.32
LMO1-202ENST00000428101 IGLV4-69A0A075B6H9 119 aa17.03■□□□□ 0.32
LMO1-202ENST00000428101 TRAV13-1A0A0B4J241 112 aa17.03■□□□□ 0.32
LMO1-202ENST00000428101 PRR3P79522 188 aaKnown RBP17.03■□□□□ 0.32
LMO1-202ENST00000428101 TNFRSF6BO95407 300 aa17.02■□□□□ 0.32
LMO1-202ENST00000428101 MALP21145 153 aa17.02■□□□□ 0.32
LMO1-202ENST00000428101 MRPL54Q6P161 138 aaKnown RBP17.02■□□□□ 0.32
LMO1-202ENST00000428101 TMEM18Q96B42 140 aa17.02■□□□□ 0.32
LMO1-202ENST00000428101 A0A1B0GXF2 115 aa17.01■□□□□ 0.31
LMO1-202ENST00000428101 FAM104AQ969W3 186 aa17.01■□□□□ 0.31
LMO1-202ENST00000428101 D6R8Y8 96 aa17■□□□□ 0.31
LMO1-202ENST00000428101 RPL39P62891 51 aaKnown RBP17■□□□□ 0.31
LMO1-202ENST00000428101 HBBP68871 147 aa17■□□□□ 0.31
LMO1-202ENST00000428101 C5orf38Q86SI9 138 aa16.99■□□□□ 0.31
LMO1-202ENST00000428101 SMIM2Q9BVW6 85 aa16.99■□□□□ 0.31
LMO1-202ENST00000428101 TNXBP22105 4242 aa16.98■□□□□ 0.31
LMO1-202ENST00000428101 PTTG1IPP53801 180 aa16.98■□□□□ 0.31
LMO1-202ENST00000428101 F8W036 122 aa16.97■□□□□ 0.31
LMO1-202ENST00000428101 TCAPO15273 167 aa16.97■□□□□ 0.31
LMO1-202ENST00000428101 NPYP01303 97 aa16.97■□□□□ 0.31
LMO1-202ENST00000428101 S100A8P05109 93 aa16.97■□□□□ 0.31
LMO1-202ENST00000428101 LOC107984640A0A0U1RRK4 108 aa16.95■□□□□ 0.3
LMO1-202ENST00000428101 C2orf48Q96LS8 159 aa16.95■□□□□ 0.3
LMO1-202ENST00000428101 CAMK2N2Q96S95 79 aa16.95■□□□□ 0.3
LMO1-202ENST00000428101 GAGE2BQ13066 116 aa16.94■□□□□ 0.3
LMO1-202ENST00000428101 OPRPNQ99935 248 aaPredicted RBP16.94■□□□□ 0.3
LMO1-202ENST00000428101 SPANXA1Q9NS26 97 aa16.93■□□□□ 0.3
LMO1-202ENST00000428101 UBR4Q5T4S7 5183 aa16.93■□□□□ 0.3
LMO1-202ENST00000428101 APOMO95445 188 aa16.92■□□□□ 0.3
LMO1-202ENST00000428101 PPBPP02775 128 aa16.92■□□□□ 0.3
LMO1-202ENST00000428101 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms