RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 PRSS47A8MTI9 375 aa6□□□□□ -1.45
SMC1A-203ENST00000428014 K7EMI3 77 aa6□□□□□ -1.45
SMC1A-203ENST00000428014 SUMO2P61956 95 aaKnown RBP6□□□□□ -1.45
SMC1A-203ENST00000428014 CNBPP62633 177 aaKnown RBP6□□□□□ -1.45
SMC1A-203ENST00000428014 LINC00269Q8N2A0 174 aa6□□□□□ -1.45
SMC1A-203ENST00000428014 KIR2DL4Q99706 377 aa6□□□□□ -1.45
SMC1A-203ENST00000428014 HSPG2P98160 4391 aa5.99□□□□□ -1.45
SMC1A-203ENST00000428014 TRAV26-2A0A0B4J265 109 aa5.99□□□□□ -1.45
SMC1A-203ENST00000428014 PMCHP20382 165 aa5.99□□□□□ -1.45
SMC1A-203ENST00000428014 S100PP25815 95 aa5.99□□□□□ -1.45
SMC1A-203ENST00000428014 XGP55808 180 aa5.99□□□□□ -1.45
SMC1A-203ENST00000428014 KRTAP10-1P60331 282 aa5.99□□□□□ -1.45
SMC1A-203ENST00000428014 GAGE6Q13070 117 aa5.99□□□□□ -1.45
SMC1A-203ENST00000428014 AMN1Q8IY45 258 aa5.99□□□□□ -1.45
SMC1A-203ENST00000428014 NRACQ8N912 160 aa5.99□□□□□ -1.45
SMC1A-203ENST00000428014 TMEM18Q96B42 140 aa5.99□□□□□ -1.45
SMC1A-203ENST00000428014 RPL39LQ96EH5 51 aaKnown RBP5.99□□□□□ -1.45
SMC1A-203ENST00000428014 BTF3L4Q96K17 158 aa5.99□□□□□ -1.45
SMC1A-203ENST00000428014 IGLV4-60A0A075B6I1 120 aa5.98□□□□□ -1.45
SMC1A-203ENST00000428014 TSHBP01222 138 aa5.98□□□□□ -1.45
SMC1A-203ENST00000428014 FGF6P10767 208 aa5.98□□□□□ -1.45
SMC1A-203ENST00000428014 CFAP161Q6P656 301 aa5.98□□□□□ -1.45
SMC1A-203ENST00000428014 OR5A1Q8NGJ0 315 aa5.98□□□□□ -1.45
SMC1A-203ENST00000428014 PKIGQ9Y2B9 76 aa5.98□□□□□ -1.45
SMC1A-203ENST00000428014 NPSP0C0P6 89 aa5.97□□□□□ -1.45
SMC1A-203ENST00000428014 WFDC2Q14508 124 aa5.97□□□□□ -1.45
SMC1A-203ENST00000428014 COX19Q49B96 90 aa5.97□□□□□ -1.45
SMC1A-203ENST00000428014 MRPL51Q4U2R6 128 aaKnown RBP5.97□□□□□ -1.45
SMC1A-203ENST00000428014 AMMECR1LQ6DCA0 310 aa5.97□□□□□ -1.45
SMC1A-203ENST00000428014 C9orf163Q8N9P6 203 aa5.97□□□□□ -1.45
SMC1A-203ENST00000428014 BAALCQ8WXS3 180 aa5.97□□□□□ -1.45
SMC1A-203ENST00000428014 TMEM101Q96IK0 257 aa5.97□□□□□ -1.45
SMC1A-203ENST00000428014 SMCO4Q9NRQ5 59 aa5.97□□□□□ -1.45
SMC1A-203ENST00000428014 APOBP04114 4563 aaKnown RBP5.97□□□□□ -1.45
SMC1A-203ENST00000428014 USP17L23D6RBM5 183 aa5.96□□□□□ -1.46
SMC1A-203ENST00000428014 CKS2P33552 79 aa5.96□□□□□ -1.46
SMC1A-203ENST00000428014 RPS10P46783 165 aaKnown RBP5.96□□□□□ -1.46
SMC1A-203ENST00000428014 ORMDL3Q8N138 153 aa5.96□□□□□ -1.46
SMC1A-203ENST00000428014 CDC42SE2Q9NRR3 84 aa5.96□□□□□ -1.46
SMC1A-203ENST00000428014 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.95□□□□□ -1.46
SMC1A-203ENST00000428014 LINC01549A6NIU2 74 aa5.95□□□□□ -1.46
SMC1A-203ENST00000428014 ZNF561-AS1K7EIQ3 104 aa5.95□□□□□ -1.46
SMC1A-203ENST00000428014 G0S2P27469 103 aa5.95□□□□□ -1.46
SMC1A-203ENST00000428014 MRPS36P82909 103 aaKnown RBP5.95□□□□□ -1.46
SMC1A-203ENST00000428014 CIRBPQ14011 172 aaKnown RBP5.95□□□□□ -1.46
SMC1A-203ENST00000428014 SMIM2Q9BVW6 85 aa5.95□□□□□ -1.46
SMC1A-203ENST00000428014 SPANXA1Q9NS26 97 aa5.95□□□□□ -1.46
SMC1A-203ENST00000428014 PYGO1Q9Y3Y4 419 aa5.95□□□□□ -1.46
SMC1A-203ENST00000428014 GVQW2A0A096LPI5 108 aaPredicted RBP5.94□□□□□ -1.46
SMC1A-203ENST00000428014 C1orf196B1AJZ1 125 aa5.94□□□□□ -1.46
SMC1A-203ENST00000428014 EPM2AB3EWF7 344 aa5.94□□□□□ -1.46
SMC1A-203ENST00000428014 TNFRSF6BO95407 300 aa5.94□□□□□ -1.46
SMC1A-203ENST00000428014 FCER1GP30273 86 aa5.94□□□□□ -1.46
SMC1A-203ENST00000428014 CAMPP49913 170 aa5.94□□□□□ -1.46
SMC1A-203ENST00000428014 CD164L2Q6UWJ8 174 aa5.94□□□□□ -1.46
SMC1A-203ENST00000428014 CBLN2Q8IUK8 224 aa5.94□□□□□ -1.46
SMC1A-203ENST00000428014 ZNF664Q8N3J9 261 aa5.94□□□□□ -1.46
SMC1A-203ENST00000428014 CHAC1Q9BUX1 264 aa5.94□□□□□ -1.46
SMC1A-203ENST00000428014 LINC00959A0A1B0GUT2 108 aa5.93□□□□□ -1.46
SMC1A-203ENST00000428014 F8WDY8 70 aa5.93□□□□□ -1.46
SMC1A-203ENST00000428014 GAS8-AS1O95177 125 aa5.93□□□□□ -1.46
SMC1A-203ENST00000428014 HLA-DQA1P01909 254 aa5.93□□□□□ -1.46
SMC1A-203ENST00000428014 PRSS1P07477 247 aa5.93□□□□□ -1.46
SMC1A-203ENST00000428014 MRPL54Q6P161 138 aaKnown RBP5.93□□□□□ -1.46
SMC1A-203ENST00000428014 RNASEKQ6P5S7 137 aaKnown RBP5.93□□□□□ -1.46
SMC1A-203ENST00000428014 TMEM136Q6ZRR5 245 aa5.93□□□□□ -1.46
SMC1A-203ENST00000428014 YPEL4Q96NS1 127 aa5.93□□□□□ -1.46
SMC1A-203ENST00000428014 UBE2D4Q9Y2X8 147 aa5.93□□□□□ -1.46
SMC1A-203ENST00000428014 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.92□□□□□ -1.46
SMC1A-203ENST00000428014 IGKV2-29A2NJV5 120 aaPredicted RBP5.92□□□□□ -1.46
SMC1A-203ENST00000428014 D6R8Y8 96 aa5.92□□□□□ -1.46
SMC1A-203ENST00000428014 MT-ND6P03923 174 aa5.92□□□□□ -1.46
SMC1A-203ENST00000428014 SS18Q15532 418 aa5.92□□□□□ -1.46
SMC1A-203ENST00000428014 CHCHD10Q8WYQ3 142 aaPredicted RBP5.92□□□□□ -1.46
SMC1A-203ENST00000428014 IGLV10-54A0A075B6I4 117 aa5.91□□□□□ -1.46
SMC1A-203ENST00000428014 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.91□□□□□ -1.46
SMC1A-203ENST00000428014 IGHV1-58A0A0C4DH39 117 aa5.91□□□□□ -1.46
SMC1A-203ENST00000428014 SCO1O75880 301 aa5.91□□□□□ -1.46
SMC1A-203ENST00000428014 LINC00310P59036 64 aa5.91□□□□□ -1.46
SMC1A-203ENST00000428014 FOXI1Q12951 378 aa5.91□□□□□ -1.46
SMC1A-203ENST00000428014 SDIM1Q6ZPB5 146 aa5.91□□□□□ -1.46
SMC1A-203ENST00000428014 PRELID3AQ96N28 172 aa5.91□□□□□ -1.46
SMC1A-203ENST00000428014 GNB1LQ9BYB4 327 aa5.91□□□□□ -1.46
SMC1A-203ENST00000428014 NXT2Q9NPJ8 142 aaKnown RBP5.91□□□□□ -1.46
SMC1A-203ENST00000428014 PCLOQ9Y6V0 5065 aa5.91□□□□□ -1.46
SMC1A-203ENST00000428014 TGIF2-C20orf24A0A0A6YYL0 155 aa5.9□□□□□ -1.46
SMC1A-203ENST00000428014 LECT2O14960 151 aa5.9□□□□□ -1.46
SMC1A-203ENST00000428014 NPYP01303 97 aa5.9□□□□□ -1.46
SMC1A-203ENST00000428014 PLA2G1BP04054 148 aaKnown RBP5.9□□□□□ -1.46
SMC1A-203ENST00000428014 RAB5AP20339 215 aa5.9□□□□□ -1.46
SMC1A-203ENST00000428014 ORMDL2Q53FV1 153 aa5.9□□□□□ -1.46
SMC1A-203ENST00000428014 LINC01561Q8N1V8 128 aa5.9□□□□□ -1.46
SMC1A-203ENST00000428014 C15orf56Q8N910 161 aa5.9□□□□□ -1.46
SMC1A-203ENST00000428014 MAP1LC3AQ9H492 121 aa5.9□□□□□ -1.46
SMC1A-203ENST00000428014 FAM30AQ9NZY2 134 aa5.9□□□□□ -1.46
SMC1A-203ENST00000428014 LINC00474Q9P2X8 69 aa5.9□□□□□ -1.46
SMC1A-203ENST00000428014 IGHV3-64A0A075B6Q5 118 aa5.89□□□□□ -1.47
SMC1A-203ENST00000428014 hDV102S1A0JD36 115 aa5.89□□□□□ -1.47
SMC1A-203ENST00000428014 GAGE12HA6NDE8 117 aa5.89□□□□□ -1.47
SMC1A-203ENST00000428014 COLCA2A8K830 154 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms