RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 PRSS47A8MTI9 375 aa16.6■□□□□ 0.25
HERPUD2-205ENST00000427455 KRTAP26-1Q6PEX3 210 aa16.6■□□□□ 0.25
HERPUD2-205ENST00000427455 TMEM18Q96B42 140 aa16.6■□□□□ 0.25
HERPUD2-205ENST00000427455 FUSP35637 526 aaKnown RBP eCLIP16.59■□□□□ 0.25
HERPUD2-205ENST00000427455 KIAA1109Q2LD37 5005 aa16.58■□□□□ 0.25
HERPUD2-205ENST00000427455 MT-ND6P03923 174 aa16.58■□□□□ 0.24
HERPUD2-205ENST00000427455 UBE2D4Q9Y2X8 147 aa16.58■□□□□ 0.24
HERPUD2-205ENST00000427455 IGKV3OR2-268A0A0C4DH90 116 aa16.57■□□□□ 0.24
HERPUD2-205ENST00000427455 LOC389332A0A1B0GUA5 103 aa16.57■□□□□ 0.24
HERPUD2-205ENST00000427455 RAB5AP20339 215 aa16.57■□□□□ 0.24
HERPUD2-205ENST00000427455 DGAT2L7PQ6IED9 249 aa16.57■□□□□ 0.24
HERPUD2-205ENST00000427455 SLC7A5P1Q8MH63 180 aa16.57■□□□□ 0.24
HERPUD2-205ENST00000427455 CSDC2Q9Y534 153 aaKnown RBP16.57■□□□□ 0.24
HERPUD2-205ENST00000427455 IGLV5-52A0A0A0MRZ9 124 aa16.56■□□□□ 0.24
HERPUD2-205ENST00000427455 CDC42SE2Q9NRR3 84 aa16.56■□□□□ 0.24
HERPUD2-205ENST00000427455 KIAA1644Q3SXP7 199 aa16.55■□□□□ 0.24
HERPUD2-205ENST00000427455 ZNF664Q8N3J9 261 aa16.55■□□□□ 0.24
HERPUD2-205ENST00000427455 Q8N8P6 123 aa16.55■□□□□ 0.24
HERPUD2-205ENST00000427455 TIMM21Q9BVV7 248 aa16.55■□□□□ 0.24
HERPUD2-205ENST00000427455 TGIF2-C20orf24A0A0A6YYL0 155 aa16.54■□□□□ 0.24
HERPUD2-205ENST00000427455 C14orf177Q52M58 125 aa16.54■□□□□ 0.24
HERPUD2-205ENST00000427455 RPL39P62891 51 aaKnown RBP16.53■□□□□ 0.24
HERPUD2-205ENST00000427455 USP17L23D6RBM5 183 aa16.52■□□□□ 0.24
HERPUD2-205ENST00000427455 MRPL18Q9H0U6 180 aaKnown RBP16.52■□□□□ 0.24
HERPUD2-205ENST00000427455 NXT2Q9NPJ8 142 aaKnown RBP16.52■□□□□ 0.24
HERPUD2-205ENST00000427455 IGLV2-33A0A075B6J2 118 aaPredicted RBP16.51■□□□□ 0.23
HERPUD2-205ENST00000427455 CHCHD10Q8WYQ3 142 aaPredicted RBP16.51■□□□□ 0.23
HERPUD2-205ENST00000427455 SPANXA1Q9NS26 97 aa16.51■□□□□ 0.23
HERPUD2-205ENST00000427455 APOBP04114 4563 aaKnown RBP16.5■□□□□ 0.23
HERPUD2-205ENST00000427455 K7EMI3 77 aa16.5■□□□□ 0.23
HERPUD2-205ENST00000427455 GCSHP23434 173 aa16.5■□□□□ 0.23
HERPUD2-205ENST00000427455 Q6ZUT4 128 aa16.5■□□□□ 0.23
HERPUD2-205ENST00000427455 LINC00959A0A1B0GUT2 108 aa16.49■□□□□ 0.23
HERPUD2-205ENST00000427455 GAGE12HA6NDE8 117 aa16.49■□□□□ 0.23
HERPUD2-205ENST00000427455 FABP9Q0Z7S8 132 aa16.49■□□□□ 0.23
HERPUD2-205ENST00000427455 HERC2O95714 4834 aa16.49■□□□□ 0.23
HERPUD2-205ENST00000427455 ORMDL2Q53FV1 153 aa16.48■□□□□ 0.23
HERPUD2-205ENST00000427455 ALKBH7Q9BT30 221 aaPredicted RBP16.48■□□□□ 0.23
HERPUD2-205ENST00000427455 RYR1P21817 5038 aa16.48■□□□□ 0.23
HERPUD2-205ENST00000427455 CDK2AP2O75956 126 aa16.47■□□□□ 0.23
HERPUD2-205ENST00000427455 IFI27P40305 119 aaPredicted RBP16.47■□□□□ 0.23
HERPUD2-205ENST00000427455 SS18Q15532 418 aa16.46■□□□□ 0.23
HERPUD2-205ENST00000427455 RNASE13Q5GAN3 156 aaKnown RBP16.46■□□□□ 0.23
HERPUD2-205ENST00000427455 YPEL4Q96NS1 127 aa16.46■□□□□ 0.23
HERPUD2-205ENST00000427455 CCL25O15444 150 aa16.45■□□□□ 0.22
HERPUD2-205ENST00000427455 XCL1P47992 114 aa16.45■□□□□ 0.22
HERPUD2-205ENST00000427455 KRTAP10-1P60331 282 aa16.45■□□□□ 0.22
HERPUD2-205ENST00000427455 MRPS36P82909 103 aaKnown RBP16.45■□□□□ 0.22
HERPUD2-205ENST00000427455 CYSLTR1Q9Y271 337 aa16.45■□□□□ 0.22
HERPUD2-205ENST00000427455 TRAPPC1Q9Y5R8 145 aa16.45■□□□□ 0.22
HERPUD2-205ENST00000427455 PYGO1Q9Y3Y4 419 aa16.44■□□□□ 0.22
HERPUD2-205ENST00000427455 PRSS1P07477 247 aa16.43■□□□□ 0.22
HERPUD2-205ENST00000427455 FOXI1Q12951 378 aa16.43■□□□□ 0.22
HERPUD2-205ENST00000427455 SMCO4Q9NRQ5 59 aa16.43■□□□□ 0.22
HERPUD2-205ENST00000427455 C1orf196B1AJZ1 125 aa16.42■□□□□ 0.22
HERPUD2-205ENST00000427455 C2orf66Q6UXQ4 117 aa16.42■□□□□ 0.22
HERPUD2-205ENST00000427455 CBLN2Q8IUK8 224 aa16.42■□□□□ 0.22
HERPUD2-205ENST00000427455 PRSS3P2Q8NHM4 247 aa16.42■□□□□ 0.22
HERPUD2-205ENST00000427455 FAM104AQ969W3 186 aa16.42■□□□□ 0.22
HERPUD2-205ENST00000427455 HSPG2P98160 4391 aa16.42■□□□□ 0.22
HERPUD2-205ENST00000427455 CD164L2Q6UWJ8 174 aa16.41■□□□□ 0.22
HERPUD2-205ENST00000427455 TRAV13-1A0A0B4J241 112 aa16.4■□□□□ 0.22
HERPUD2-205ENST00000427455 CFAP161Q6P656 301 aa16.4■□□□□ 0.22
HERPUD2-205ENST00000427455 OPRPNQ99935 248 aaPredicted RBP16.4■□□□□ 0.22
HERPUD2-205ENST00000427455 hDV102S1A0JD36 115 aa16.39■□□□□ 0.21
HERPUD2-205ENST00000427455 G0S2P27469 103 aa16.39■□□□□ 0.21
HERPUD2-205ENST00000427455 C15orf56Q8N910 161 aa16.39■□□□□ 0.21
HERPUD2-205ENST00000427455 IGLV4-3A0A075B6K6 122 aa16.38■□□□□ 0.21
HERPUD2-205ENST00000427455 DNAH8Q96JB1 4490 aa16.38■□□□□ 0.21
HERPUD2-205ENST00000427455 LINC01546A6NGU7 62 aa16.37■□□□□ 0.21
HERPUD2-205ENST00000427455 TMEM141Q96I45 108 aa16.37■□□□□ 0.21
HERPUD2-205ENST00000427455 IFITM10A6NMD0 228 aa16.36■□□□□ 0.21
HERPUD2-205ENST00000427455 NPSP0C0P6 89 aa16.35■□□□□ 0.21
HERPUD2-205ENST00000427455 FA2HQ7L5A8 372 aa16.35■□□□□ 0.21
HERPUD2-205ENST00000427455 AP5S1Q9NUS5 200 aa16.35■□□□□ 0.21
HERPUD2-205ENST00000427455 CNBPP62633 177 aaKnown RBP16.34■□□□□ 0.21
HERPUD2-205ENST00000427455 LINC01620Q4KN68 170 aa16.34■□□□□ 0.21
HERPUD2-205ENST00000427455 TOMM6Q96B49 74 aa16.34■□□□□ 0.21
HERPUD2-205ENST00000427455 GVQW2A0A096LPI5 108 aaPredicted RBP16.33■□□□□ 0.2
HERPUD2-205ENST00000427455 Q6ZN92 141 aa16.33■□□□□ 0.2
HERPUD2-205ENST00000427455 C18orf32Q8TCD1 76 aa16.33■□□□□ 0.2
HERPUD2-205ENST00000427455 IGHV1-58A0A0C4DH39 117 aa16.32■□□□□ 0.2
HERPUD2-205ENST00000427455 IGIPA6NJ69 53 aa16.32■□□□□ 0.2
HERPUD2-205ENST00000427455 COX7A2LO14548 114 aa16.32■□□□□ 0.2
HERPUD2-205ENST00000427455 TEX43Q6ZNM6 134 aa16.32■□□□□ 0.2
HERPUD2-205ENST00000427455 LINC01549A6NIU2 74 aa16.31■□□□□ 0.2
HERPUD2-205ENST00000427455 HIGD2BQ4VC39 106 aa16.31■□□□□ 0.2
HERPUD2-205ENST00000427455 TIMM17AQ99595 171 aa16.31■□□□□ 0.2
HERPUD2-205ENST00000427455 C9orf163Q8N9P6 203 aa16.3■□□□□ 0.2
HERPUD2-205ENST00000427455 C2orf88Q9BSF0 95 aa16.3■□□□□ 0.2
HERPUD2-205ENST00000427455 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.29■□□□□ 0.2
HERPUD2-205ENST00000427455 MALP21145 153 aa16.29■□□□□ 0.2
HERPUD2-205ENST00000427455 XGP55808 180 aa16.29■□□□□ 0.2
HERPUD2-205ENST00000427455 PAPPA-AS1Q5QFB9 102 aa16.29■□□□□ 0.2
HERPUD2-205ENST00000427455 Q6ZSA8 131 aa16.29■□□□□ 0.2
HERPUD2-205ENST00000427455 LINC00173Q6ZV60 143 aa16.28■□□□□ 0.2
HERPUD2-205ENST00000427455 ERASQ7Z444 233 aa16.28■□□□□ 0.2
HERPUD2-205ENST00000427455 AMELXQ99217 191 aa16.28■□□□□ 0.2
HERPUD2-205ENST00000427455 VCX2Q9H322 139 aa16.28■□□□□ 0.2
HERPUD2-205ENST00000427455 FAM30AQ9NZY2 134 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms