RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 DPM2O94777 84 aa10.47□□□□□ -0.73
GINS3-203ENST00000426538 IGKCP01834 107 aa10.47□□□□□ -0.73
GINS3-203ENST00000426538 OR5A1Q8NGJ0 315 aa10.47□□□□□ -0.73
GINS3-203ENST00000426538 TRAV9-2A0A087WT02 112 aa10.47□□□□□ -0.73
GINS3-203ENST00000426538 ZNF25P17030 456 aaPredicted RBP10.47□□□□□ -0.73
GINS3-203ENST00000426538 MRPS36P82909 103 aaKnown RBP10.47□□□□□ -0.73
GINS3-203ENST00000426538 ZC2HC1BQ5TFG8 222 aa10.47□□□□□ -0.73
GINS3-203ENST00000426538 PAM16Q9Y3D7 125 aa10.47□□□□□ -0.73
GINS3-203ENST00000426538 PLNP26678 52 aa10.46□□□□□ -0.74
GINS3-203ENST00000426538 AMELXQ99217 191 aa10.46□□□□□ -0.74
GINS3-203ENST00000426538 DNAH9Q9NYC9 4486 aa10.45□□□□□ -0.74
GINS3-203ENST00000426538 RNASE13Q5GAN3 156 aaKnown RBP10.45□□□□□ -0.74
GINS3-203ENST00000426538 LYPD5Q6UWN5 251 aa10.45□□□□□ -0.74
GINS3-203ENST00000426538 Q6ZUT4 128 aa10.45□□□□□ -0.74
GINS3-203ENST00000426538 C2orf88Q9BSF0 95 aa10.45□□□□□ -0.74
GINS3-203ENST00000426538 LELP1Q5T871 98 aa10.44□□□□□ -0.74
GINS3-203ENST00000426538 ZNF664Q8N3J9 261 aa10.44□□□□□ -0.74
GINS3-203ENST00000426538 FAM104AQ969W3 186 aa10.44□□□□□ -0.74
GINS3-203ENST00000426538 MAJINQ3KP22 176 aa10.44□□□□□ -0.74
GINS3-203ENST00000426538 SPATA45Q537H7 98 aa10.44□□□□□ -0.74
GINS3-203ENST00000426538 C15orf53Q8NAA6 179 aa10.44□□□□□ -0.74
GINS3-203ENST00000426538 CDC42SE2Q9NRR3 84 aa10.44□□□□□ -0.74
GINS3-203ENST00000426538 COL7A1Q02388 2944 aa10.44□□□□□ -0.74
GINS3-203ENST00000426538 hDV102S1A0JD36 115 aa10.43□□□□□ -0.74
GINS3-203ENST00000426538 A0A1B0GUV1 79 aa10.42□□□□□ -0.74
GINS3-203ENST00000426538 TIRAPP58753 221 aa10.42□□□□□ -0.74
GINS3-203ENST00000426538 MEGF8Q7Z7M0 2845 aa10.42□□□□□ -0.74
GINS3-203ENST00000426538 TRAV8-6A0A0B4J262 113 aa10.41□□□□□ -0.74
GINS3-203ENST00000426538 IGLL5B9A064 214 aa10.41□□□□□ -0.74
GINS3-203ENST00000426538 PKIAP61925 76 aa10.41□□□□□ -0.74
GINS3-203ENST00000426538 TSTD3H0UI37 97 aa10.41□□□□□ -0.74
GINS3-203ENST00000426538 STPG4Q8N801 248 aa10.41□□□□□ -0.74
GINS3-203ENST00000426538 IGLV4-69A0A075B6H9 119 aa10.4□□□□□ -0.74
GINS3-203ENST00000426538 IGLV4-60A0A075B6I1 120 aa10.4□□□□□ -0.74
GINS3-203ENST00000426538 MPV17L2Q567V2 206 aa10.4□□□□□ -0.74
GINS3-203ENST00000426538 PRO1933Q9H354 126 aa10.4□□□□□ -0.74
GINS3-203ENST00000426538 A0A0J9YXV3 536 aa10.39□□□□□ -0.75
GINS3-203ENST00000426538 C11orf86A6NJI1 115 aa10.39□□□□□ -0.75
GINS3-203ENST00000426538 RBX1P62877 108 aa10.39□□□□□ -0.75
GINS3-203ENST00000426538 ESRGQ1W209 222 aa10.39□□□□□ -0.75
GINS3-203ENST00000426538 IGLC3P0DOY3 106 aa10.38□□□□□ -0.75
GINS3-203ENST00000426538 TMEM170BQ5T4T1 132 aa10.38□□□□□ -0.75
GINS3-203ENST00000426538 NFE4Q86UQ8 179 aa10.38□□□□□ -0.75
GINS3-203ENST00000426538 CHAC1Q9BUX1 264 aa10.38□□□□□ -0.75
GINS3-203ENST00000426538 TRAV13-1A0A0B4J241 112 aa10.38□□□□□ -0.75
GINS3-203ENST00000426538 UBE2D1P51668 147 aa10.38□□□□□ -0.75
GINS3-203ENST00000426538 SEC11AP67812 179 aa10.38□□□□□ -0.75
GINS3-203ENST00000426538 TINCRA0A1B0GVN0 87 aa10.37□□□□□ -0.75
GINS3-203ENST00000426538 PCP4L1A6NKN8 68 aa10.37□□□□□ -0.75
GINS3-203ENST00000426538 GEMIN7Q9H840 131 aaKnown RBP10.37□□□□□ -0.75
GINS3-203ENST00000426538 IGKV3OR2-268A0A0C4DH90 116 aa10.36□□□□□ -0.75
GINS3-203ENST00000426538 TCTAP57738 103 aa10.36□□□□□ -0.75
GINS3-203ENST00000426538 STAB2Q8WWQ8 2551 aa10.36□□□□□ -0.75
GINS3-203ENST00000426538 PRKDCP78527 4128 aaKnown RBP10.36□□□□□ -0.75
GINS3-203ENST00000426538 ANGP03950 147 aaKnown RBP10.36□□□□□ -0.75
GINS3-203ENST00000426538 HERVK_113P61574 105 aa10.36□□□□□ -0.75
GINS3-203ENST00000426538 ANKRD39Q53RE8 183 aa10.36□□□□□ -0.75
GINS3-203ENST00000426538 CCL18P55774 89 aa10.35□□□□□ -0.75
GINS3-203ENST00000426538 HERVK_113P63121 156 aa10.35□□□□□ -0.75
GINS3-203ENST00000426538 C14orf144Q96I85 54 aa10.35□□□□□ -0.75
GINS3-203ENST00000426538 NMUP48645 174 aa10.34□□□□□ -0.75
GINS3-203ENST00000426538 FAM19A3Q7Z5A8 133 aa10.34□□□□□ -0.75
GINS3-203ENST00000426538 ZNF22P17026 224 aaPredicted RBP10.33□□□□□ -0.76
GINS3-203ENST00000426538 LINC00242Q5T6M2 205 aa10.33□□□□□ -0.76
GINS3-203ENST00000426538 LINC00269Q8N2A0 174 aa10.33□□□□□ -0.76
GINS3-203ENST00000426538 LINC00469Q8N7U9 141 aa10.33□□□□□ -0.76
GINS3-203ENST00000426538 NUPR2A6NF83 97 aa10.33□□□□□ -0.76
GINS3-203ENST00000426538 WFDC10BQ8IUB3 73 aa10.33□□□□□ -0.76
GINS3-203ENST00000426538 Q8N3U1 123 aa10.33□□□□□ -0.76
GINS3-203ENST00000426538 KLK5Q9Y337 293 aaPredicted RBP10.33□□□□□ -0.76
GINS3-203ENST00000426538 COX6A2Q02221 97 aa10.32□□□□□ -0.76
GINS3-203ENST00000426538 SS18Q15532 418 aa10.32□□□□□ -0.76
GINS3-203ENST00000426538 MIEN1Q9BRT3 115 aa10.32□□□□□ -0.76
GINS3-203ENST00000426538 UQCR10Q9UDW1 63 aa10.32□□□□□ -0.76
GINS3-203ENST00000426538 LINC00959A0A1B0GUT2 108 aa10.31□□□□□ -0.76
GINS3-203ENST00000426538 E9PLD3 99 aa10.31□□□□□ -0.76
GINS3-203ENST00000426538 H3BRM9 83 aa10.31□□□□□ -0.76
GINS3-203ENST00000426538 CCL25O15444 150 aa10.31□□□□□ -0.76
GINS3-203ENST00000426538 IGHV3-30P01768 117 aa10.31□□□□□ -0.76
GINS3-203ENST00000426538 IGHV3-33P01772 117 aa10.31□□□□□ -0.76
GINS3-203ENST00000426538 IGHV3-30-3P0DP02 117 aa10.31□□□□□ -0.76
GINS3-203ENST00000426538 IGHV3-30-5P0DP03 117 aa10.31□□□□□ -0.76
GINS3-203ENST00000426538 REG3AQ06141 175 aa10.31□□□□□ -0.76
GINS3-203ENST00000426538 CLPSL2Q6UWE3 100 aa10.31□□□□□ -0.76
GINS3-203ENST00000426538 IGKV2D-26A0A0A0MRZ7 120 aa10.3□□□□□ -0.76
GINS3-203ENST00000426538 TMEM223A0PJW6 202 aa10.3□□□□□ -0.76
GINS3-203ENST00000426538 COX8AP10176 69 aa10.3□□□□□ -0.76
GINS3-203ENST00000426538 SLC25A34Q6PIV7 304 aa10.3□□□□□ -0.76
GINS3-203ENST00000426538 CDKN2A-AS1Q9UH64 79 aa10.3□□□□□ -0.76
GINS3-203ENST00000426538 KLK12Q9UKR0 248 aa10.3□□□□□ -0.76
GINS3-203ENST00000426538 LINC00588Q9Y4M8 146 aa10.3□□□□□ -0.76
GINS3-203ENST00000426538 IGLV5-45A0A087WSX0 123 aa10.29□□□□□ -0.76
GINS3-203ENST00000426538 MRPS16Q9Y3D3 137 aaKnown RBP10.29□□□□□ -0.76
GINS3-203ENST00000426538 CRPP02741 224 aa10.28□□□□□ -0.76
GINS3-203ENST00000426538 DDTP30046 118 aa10.28□□□□□ -0.76
GINS3-203ENST00000426538 APLNQ9ULZ1 77 aa10.28□□□□□ -0.76
GINS3-203ENST00000426538 IGHV3-64A0A075B6Q5 118 aa10.27□□□□□ -0.76
GINS3-203ENST00000426538 SIVA1O15304 175 aa10.27□□□□□ -0.76
GINS3-203ENST00000426538 LINC01556Q5JQF7 62 aa10.27□□□□□ -0.76
GINS3-203ENST00000426538 PCP2Q8IVA1 136 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 168.7 ms