RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 RPL13AP40429 203 aaKnown RBP5.46□□□□□ -1.53
SMARCC1-202ENST00000425518 SPANXA1Q9NS26 97 aa5.46□□□□□ -1.53
SMARCC1-202ENST00000425518 IGHV3-53P01767 116 aa5.46□□□□□ -1.54
SMARCC1-202ENST00000425518 UBE2WQ96B02 151 aa5.46□□□□□ -1.54
SMARCC1-202ENST00000425518 IGSF10Q6WRI0 2623 aa5.46□□□□□ -1.54
SMARCC1-202ENST00000425518 USP24Q9UPU5 2620 aa5.46□□□□□ -1.54
SMARCC1-202ENST00000425518 H7C423 109 aa5.46□□□□□ -1.54
SMARCC1-202ENST00000425518 C11orf44Q8N8P7 122 aa5.46□□□□□ -1.54
SMARCC1-202ENST00000425518 TEX15Q9BXT5 2789 aa5.46□□□□□ -1.54
SMARCC1-202ENST00000425518 TRAV13-1A0A0B4J241 112 aa5.45□□□□□ -1.54
SMARCC1-202ENST00000425518 NDUFA7O95182 113 aa5.45□□□□□ -1.54
SMARCC1-202ENST00000425518 COX6A2Q02221 97 aa5.45□□□□□ -1.54
SMARCC1-202ENST00000425518 CHD6Q8TD26 2715 aa5.45□□□□□ -1.54
SMARCC1-202ENST00000425518 DSCR9P59020 149 aa5.45□□□□□ -1.54
SMARCC1-202ENST00000425518 TTC32Q5I0X7 151 aa5.45□□□□□ -1.54
SMARCC1-202ENST00000425518 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.45□□□□□ -1.54
SMARCC1-202ENST00000425518 C15orf53Q8NAA6 179 aa5.45□□□□□ -1.54
SMARCC1-202ENST00000425518 TMEM101Q96IK0 257 aa5.45□□□□□ -1.54
SMARCC1-202ENST00000425518 SPANXDQ9BXN6 97 aa5.45□□□□□ -1.54
SMARCC1-202ENST00000425518 SPANXCQ9NY87 97 aa5.45□□□□□ -1.54
SMARCC1-202ENST00000425518 CIRBPQ14011 172 aaKnown RBP5.45□□□□□ -1.54
SMARCC1-202ENST00000425518 CFAP161Q6P656 301 aa5.45□□□□□ -1.54
SMARCC1-202ENST00000425518 Q9H8V8 135 aa5.45□□□□□ -1.54
SMARCC1-202ENST00000425518 MAP6D1Q9H9H5 199 aa5.45□□□□□ -1.54
SMARCC1-202ENST00000425518 YAE1D1Q9NRH1 226 aa5.45□□□□□ -1.54
SMARCC1-202ENST00000425518 TRGV1A0A0A0MS02 117 aa5.44□□□□□ -1.54
SMARCC1-202ENST00000425518 FBN2P35556 2912 aa5.44□□□□□ -1.54
SMARCC1-202ENST00000425518 Q6YL49 198 aa5.44□□□□□ -1.54
SMARCC1-202ENST00000425518 PEMTQ9UBM1 199 aa5.44□□□□□ -1.54
SMARCC1-202ENST00000425518 M0QXV9 152 aa5.44□□□□□ -1.54
SMARCC1-202ENST00000425518 RNF152Q8N8N0 203 aa5.44□□□□□ -1.54
SMARCC1-202ENST00000425518 CITED1Q99966 193 aa5.44□□□□□ -1.54
SMARCC1-202ENST00000425518 HECTD1Q9ULT8 2610 aa5.44□□□□□ -1.54
SMARCC1-202ENST00000425518 INSP01308 110 aa5.43□□□□□ -1.54
SMARCC1-202ENST00000425518 MEIG1Q5JSS6 88 aa5.43□□□□□ -1.54
SMARCC1-202ENST00000425518 EDA2RQ9HAV5 297 aa5.43□□□□□ -1.54
SMARCC1-202ENST00000425518 B5MCH6 92 aa5.43□□□□□ -1.54
SMARCC1-202ENST00000425518 LINC00694P0DN24 101 aa5.43□□□□□ -1.54
SMARCC1-202ENST00000425518 C11orf72Q8NBR9 251 aa5.43□□□□□ -1.54
SMARCC1-202ENST00000425518 A0A1W2PRX2 142 aa5.43□□□□□ -1.54
SMARCC1-202ENST00000425518 J3QLI3 93 aa5.43□□□□□ -1.54
SMARCC1-202ENST00000425518 DNAJC30Q96LL9 226 aa5.42□□□□□ -1.54
SMARCC1-202ENST00000425518 SS18L2Q9UHA2 77 aa5.42□□□□□ -1.54
SMARCC1-202ENST00000425518 LST1O00453 97 aa5.42□□□□□ -1.54
SMARCC1-202ENST00000425518 IFITM1P13164 125 aa5.42□□□□□ -1.54
SMARCC1-202ENST00000425518 DEFB114Q30KQ6 69 aa5.42□□□□□ -1.54
SMARCC1-202ENST00000425518 PRIMA1Q86XR5 153 aa5.42□□□□□ -1.54
SMARCC1-202ENST00000425518 LINC00308Q8TCZ7 52 aa5.42□□□□□ -1.54
SMARCC1-202ENST00000425518 BAHCC1Q9P281 2608 aa5.42□□□□□ -1.54
SMARCC1-202ENST00000425518 NF1P21359 2839 aa5.42□□□□□ -1.54
SMARCC1-202ENST00000425518 GAGE12JA6NER3 117 aa5.42□□□□□ -1.54
SMARCC1-202ENST00000425518 NDUFA1O15239 70 aa5.42□□□□□ -1.54
SMARCC1-202ENST00000425518 RS1O15537 224 aa5.42□□□□□ -1.54
SMARCC1-202ENST00000425518 NDUFV3P56181 108 aaKnown RBP5.42□□□□□ -1.54
SMARCC1-202ENST00000425518 TIRAPP58753 221 aa5.42□□□□□ -1.54
SMARCC1-202ENST00000425518 GAGE4Q13068 117 aa5.42□□□□□ -1.54
SMARCC1-202ENST00000425518 GAGE5Q13069 117 aa5.42□□□□□ -1.54
SMARCC1-202ENST00000425518 LINC00242Q5T6M2 205 aa5.42□□□□□ -1.54
SMARCC1-202ENST00000425518 STHQ8IWL8 128 aa5.42□□□□□ -1.54
SMARCC1-202ENST00000425518 CITED2Q99967 270 aaPredicted RBP5.42□□□□□ -1.54
SMARCC1-202ENST00000425518 IGKV3OR2-268A0A0C4DH90 116 aa5.41□□□□□ -1.54
SMARCC1-202ENST00000425518 H3BT86 120 aa5.41□□□□□ -1.54
SMARCC1-202ENST00000425518 GAGE6Q13070 117 aa5.41□□□□□ -1.54
SMARCC1-202ENST00000425518 NHLRC4P0CG21 123 aaPredicted RBP5.41□□□□□ -1.54
SMARCC1-202ENST00000425518 BEAN1Q3B7T3 259 aa5.41□□□□□ -1.54
SMARCC1-202ENST00000425518 A0A096LNT2 108 aa5.41□□□□□ -1.54
SMARCC1-202ENST00000425518 HERVK_113P63121 156 aa5.41□□□□□ -1.54
SMARCC1-202ENST00000425518 RPL36AP83881 106 aaKnown RBP5.41□□□□□ -1.54
SMARCC1-202ENST00000425518 Q6ZTI0 123 aa5.41□□□□□ -1.54
SMARCC1-202ENST00000425518 RPL36ALQ969Q0 106 aaKnown RBP5.41□□□□□ -1.54
SMARCC1-202ENST00000425518 TIMM17BO60830 172 aa5.4□□□□□ -1.54
SMARCC1-202ENST00000425518 IGHV4-31P0DP07 118 aa5.4□□□□□ -1.54
SMARCC1-202ENST00000425518 A8MTW9 85 aa5.4□□□□□ -1.54
SMARCC1-202ENST00000425518 PIK3CD-AS1Q5SR53 167 aa5.4□□□□□ -1.54
SMARCC1-202ENST00000425518 Q8N2B8 174 aa5.4□□□□□ -1.54
SMARCC1-202ENST00000425518 SOSTDC1Q6X4U4 206 aa5.4□□□□□ -1.55
SMARCC1-202ENST00000425518 C1orf158Q8N1D5 194 aa5.4□□□□□ -1.55
SMARCC1-202ENST00000425518 NIPBLQ6KC79 2804 aaeCLIP5.4□□□□□ -1.552e-6■■□□□ 13.4
SMARCC1-202ENST00000425518 MTORP42345 2549 aa5.4□□□□□ -1.55
SMARCC1-202ENST00000425518 FN1P02751 2386 aaKnown RBP5.39□□□□□ -1.55
SMARCC1-202ENST00000425518 CCDC179H3BU77 68 aa5.39□□□□□ -1.55
SMARCC1-202ENST00000425518 KRTAP10-9P60411 292 aa5.39□□□□□ -1.55
SMARCC1-202ENST00000425518 ODF3L2Q3SX64 289 aa5.39□□□□□ -1.55
SMARCC1-202ENST00000425518 SMIM1B2RUZ4 78 aa5.39□□□□□ -1.55
SMARCC1-202ENST00000425518 NTM-AS1Q6ZSK4 140 aa5.39□□□□□ -1.55
SMARCC1-202ENST00000425518 C4orf3Q8WVX3 66 aa5.39□□□□□ -1.55
SMARCC1-202ENST00000425518 BBC3Q96PG8 261 aaPredicted RBP5.39□□□□□ -1.55
SMARCC1-202ENST00000425518 NOP10Q9NPE3 64 aaKnown RBP5.39□□□□□ -1.55
SMARCC1-202ENST00000425518 TOMM7Q9P0U1 55 aa5.39□□□□□ -1.55
SMARCC1-202ENST00000425518 IGLV5-45A0A087WSX0 123 aa5.39□□□□□ -1.55
SMARCC1-202ENST00000425518 GAGE7O76087 117 aa5.39□□□□□ -1.55
SMARCC1-202ENST00000425518 GAGE12FP0CL80 117 aa5.39□□□□□ -1.55
SMARCC1-202ENST00000425518 GAGE12GP0CL81 117 aa5.39□□□□□ -1.55
SMARCC1-202ENST00000425518 GAGE12IP0CL82 117 aa5.39□□□□□ -1.55
SMARCC1-202ENST00000425518 UBE2L6O14933 153 aa5.38□□□□□ -1.55
SMARCC1-202ENST00000425518 IGLV5-39A0A0G2JS06 123 aa5.38□□□□□ -1.55
SMARCC1-202ENST00000425518 K7EQD1 137 aa5.38□□□□□ -1.55
SMARCC1-202ENST00000425518 ACANP16112 2415 aa5.38□□□□□ -1.55
SMARCC1-202ENST00000425518 TRGV2A0A075B6R0 118 aa5.37□□□□□ -1.55
SMARCC1-202ENST00000425518 COX7A2LO14548 114 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms