RNA–Protein interactions for RNA: ENST00000422465.6

RPS3-202, Transcript of ribosomal protein S3, humanhuman

TSL 2

Gene RPS3, Length 903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-202ENST00000422465 A0A1B0GWB2 263 aa7.46□□□□□ -1.22
RPS3-202ENST00000422465 ZNF815PA8K554 130 aa7.46□□□□□ -1.22
RPS3-202ENST00000422465 H3BUT2 72 aa7.46□□□□□ -1.22
RPS3-202ENST00000422465 K7EP34 96 aa7.46□□□□□ -1.22
RPS3-202ENST00000422465 GIG44P09565 113 aaPredicted RBP7.46□□□□□ -1.22
RPS3-202ENST00000422465 NDUFA11Q86Y39 141 aa7.46□□□□□ -1.22
RPS3-202ENST00000422465 FAM104AQ969W3 186 aa7.46□□□□□ -1.22
RPS3-202ENST00000422465 OPRPNQ99935 248 aaPredicted RBP7.46□□□□□ -1.22
RPS3-202ENST00000422465 CHCHD7Q9BUK0 85 aa7.46□□□□□ -1.22
RPS3-202ENST00000422465 A0A1W2PPM0 123 aa7.45□□□□□ -1.22
RPS3-202ENST00000422465 TMEM223A0PJW6 202 aa7.45□□□□□ -1.22
RPS3-202ENST00000422465 EMP1P54849 157 aa7.45□□□□□ -1.22
RPS3-202ENST00000422465 GTF2H5Q6ZYL4 71 aa7.45□□□□□ -1.22
RPS3-202ENST00000422465 OR5A1Q8NGJ0 315 aa7.45□□□□□ -1.22
RPS3-202ENST00000422465 TMEM263Q8WUH6 116 aaKnown RBP7.45□□□□□ -1.22
RPS3-202ENST00000422465 PLEKHB2Q96CS7 222 aa7.45□□□□□ -1.22
RPS3-202ENST00000422465 HIST1H4GQ99525 98 aa7.45□□□□□ -1.22
RPS3-202ENST00000422465 VCX2Q9H322 139 aa7.45□□□□□ -1.22
RPS3-202ENST00000422465 SPANXA1Q9NS26 97 aa7.45□□□□□ -1.22
RPS3-202ENST00000422465 COL7A1Q02388 2944 aa7.45□□□□□ -1.22
RPS3-202ENST00000422465 TRAV4A0A0B4J268 109 aa7.44□□□□□ -1.22
RPS3-202ENST00000422465 GAGE10A6NGK3 116 aa7.44□□□□□ -1.22
RPS3-202ENST00000422465 LEPROTO15243 131 aa7.44□□□□□ -1.22
RPS3-202ENST00000422465 ZNF22P17026 224 aaPredicted RBP7.44□□□□□ -1.22
RPS3-202ENST00000422465 TSPEAR-AS2P59090 65 aa7.44□□□□□ -1.22
RPS3-202ENST00000422465 C12orf74Q32Q52 190 aa7.44□□□□□ -1.22
RPS3-202ENST00000422465 TMEM170BQ5T4T1 132 aa7.44□□□□□ -1.22
RPS3-202ENST00000422465 RAB37Q96AX2 223 aa7.44□□□□□ -1.22
RPS3-202ENST00000422465 SPATA25Q9BR10 227 aa7.44□□□□□ -1.22
RPS3-202ENST00000422465 Q9UF83 564 aa7.44□□□□□ -1.22
RPS3-202ENST00000422465 TRGV1A0A0A0MS02 117 aa7.43□□□□□ -1.22
RPS3-202ENST00000422465 A0A0J9YY99 117 aa7.43□□□□□ -1.22
RPS3-202ENST00000422465 TRBV10-1A0A0K0K1A3 114 aa7.43□□□□□ -1.22
RPS3-202ENST00000422465 K7ERJ3 54 aa7.43□□□□□ -1.22
RPS3-202ENST00000422465 MRPS36P82909 103 aaKnown RBP7.43□□□□□ -1.22
RPS3-202ENST00000422465 DAZ2Q13117 558 aaKnown RBP7.43□□□□□ -1.22
RPS3-202ENST00000422465 TIMM21Q9BVV7 248 aa7.43□□□□□ -1.22
RPS3-202ENST00000422465 KRTAP9-9Q9BYP9 154 aa7.43□□□□□ -1.22
RPS3-202ENST00000422465 KRTAP9-4Q9BYQ2 154 aa7.43□□□□□ -1.22
RPS3-202ENST00000422465 SPANXB1Q9NS25 103 aaPredicted RBP7.43□□□□□ -1.22
RPS3-202ENST00000422465 NHP2Q9NX24 153 aaKnown RBP7.43□□□□□ -1.22
RPS3-202ENST00000422465 UBE2D4Q9Y2X8 147 aa7.43□□□□□ -1.22
RPS3-202ENST00000422465 IGHV3OR16-12A0A075B7B8 117 aa7.42□□□□□ -1.22
RPS3-202ENST00000422465 A0A0J9YXV3 536 aa7.42□□□□□ -1.22
RPS3-202ENST00000422465 PLAC8L1A1L4L8 177 aa7.42□□□□□ -1.22
RPS3-202ENST00000422465 IGLL5B9A064 214 aa7.42□□□□□ -1.22
RPS3-202ENST00000422465 J3QQQ9 107 aa7.42□□□□□ -1.22
RPS3-202ENST00000422465 COTL1Q14019 142 aa7.42□□□□□ -1.22
RPS3-202ENST00000422465 CSNK1G2-AS1Q8NCQ2 148 aa7.42□□□□□ -1.22
RPS3-202ENST00000422465 C16orf74Q96GX8 76 aa7.42□□□□□ -1.22
RPS3-202ENST00000422465 OVOL2Q9BRP0 275 aa7.42□□□□□ -1.22
RPS3-202ENST00000422465 C1QTNF4Q9BXJ3 329 aa7.42□□□□□ -1.22
RPS3-202ENST00000422465 DNAH3Q8TD57 4116 aa7.41□□□□□ -1.22
RPS3-202ENST00000422465 EPPK1P58107 5090 aaKnown RBP7.41□□□□□ -1.22
RPS3-202ENST00000422465 DNAH9Q9NYC9 4486 aa7.41□□□□□ -1.22
RPS3-202ENST00000422465 TINCRA0A1B0GVN0 87 aa7.41□□□□□ -1.22
RPS3-202ENST00000422465 C3orf84H3BNL1 204 aa7.41□□□□□ -1.22
RPS3-202ENST00000422465 K7EQD1 137 aa7.41□□□□□ -1.22
RPS3-202ENST00000422465 CIDEAO60543 219 aa7.41□□□□□ -1.22
RPS3-202ENST00000422465 FABP2P12104 132 aa7.41□□□□□ -1.22
RPS3-202ENST00000422465 LGALS3P17931 250 aaKnown RBP7.41□□□□□ -1.22
RPS3-202ENST00000422465 SCGB1D4Q6XE38 83 aa7.41□□□□□ -1.22
RPS3-202ENST00000422465 Q6ZTI0 123 aa7.41□□□□□ -1.22
RPS3-202ENST00000422465 SLC25A29Q8N8R3 303 aa7.41□□□□□ -1.22
RPS3-202ENST00000422465 ZNF479Q96JC4 524 aa7.41□□□□□ -1.22
RPS3-202ENST00000422465 NAA38Q9BRA0 125 aaKnown RBP7.41□□□□□ -1.22
RPS3-202ENST00000422465 WFDC10AQ9H1F0 79 aa7.41□□□□□ -1.22
RPS3-202ENST00000422465 SPCS1Q9Y6A9 102 aa7.41□□□□□ -1.22
RPS3-202ENST00000422465 RPL35AP18077 110 aaKnown RBP7.4□□□□□ -1.22
RPS3-202ENST00000422465 UBE2D1P51668 147 aa7.4□□□□□ -1.22
RPS3-202ENST00000422465 RRN3P1Q2M238 152 aa7.4□□□□□ -1.22
RPS3-202ENST00000422465 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.39□□□□□ -1.23
RPS3-202ENST00000422465 IGHV3-38A0A0C4DH36 116 aa7.39□□□□□ -1.23
RPS3-202ENST00000422465 GAGE12BA1L429 117 aa7.39□□□□□ -1.23
RPS3-202ENST00000422465 IGKV2-29A2NJV5 120 aaPredicted RBP7.39□□□□□ -1.23
RPS3-202ENST00000422465 UBE2D3P61077 147 aa7.39□□□□□ -1.23
RPS3-202ENST00000422465 UBE2D2P62837 147 aa7.39□□□□□ -1.23
RPS3-202ENST00000422465 RPL36AP83881 106 aaKnown RBP7.39□□□□□ -1.23
RPS3-202ENST00000422465 DEFB121Q5J5C9 76 aa7.39□□□□□ -1.23
RPS3-202ENST00000422465 CEMP1Q6PRD7 247 aaPredicted RBP7.39□□□□□ -1.23
RPS3-202ENST00000422465 SBSPONQ8IVN8 264 aa7.39□□□□□ -1.23
RPS3-202ENST00000422465 RPL36ALQ969Q0 106 aaKnown RBP7.39□□□□□ -1.23
RPS3-202ENST00000422465 B9D2Q9BPU9 175 aa7.39□□□□□ -1.23
RPS3-202ENST00000422465 NOP10Q9NPE3 64 aaKnown RBP7.39□□□□□ -1.23
RPS3-202ENST00000422465 RYR2Q92736 4967 aa7.39□□□□□ -1.23
RPS3-202ENST00000422465 K7EIL1 84 aa7.38□□□□□ -1.23
RPS3-202ENST00000422465 IGHV3-30P01768 117 aa7.38□□□□□ -1.23
RPS3-202ENST00000422465 IGHV3-30-5P0DP03 117 aa7.38□□□□□ -1.23
RPS3-202ENST00000422465 TIRAPP58753 221 aa7.38□□□□□ -1.23
RPS3-202ENST00000422465 SRSF9Q13242 221 aaKnown RBP eCLIP7.38□□□□□ -1.23
RPS3-202ENST00000422465 Q6ZUT4 128 aa7.38□□□□□ -1.23
RPS3-202ENST00000422465 DAZ4Q86SG3 579 aaKnown RBP7.38□□□□□ -1.23
RPS3-202ENST00000422465 DAZ3Q9NR90 486 aaKnown RBP7.38□□□□□ -1.23
RPS3-202ENST00000422465 IGLV5-45A0A087WSX0 123 aa7.37□□□□□ -1.23
RPS3-202ENST00000422465 IGHV1-58A0A0C4DH39 117 aa7.37□□□□□ -1.23
RPS3-202ENST00000422465 NHLRC4P0CG21 123 aaPredicted RBP7.37□□□□□ -1.23
RPS3-202ENST00000422465 FAM19A3Q7Z5A8 133 aa7.37□□□□□ -1.23
RPS3-202ENST00000422465 CSDC2Q9Y534 153 aaKnown RBP7.37□□□□□ -1.23
RPS3-202ENST00000422465 NOTCH3Q9UM47 2321 aa7.36□□□□□ -1.23
RPS3-202ENST00000422465 IGHV3-30-3P0DP02 117 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms