RNA–Protein interactions for RNA: ENST00000421968.6

UFD1-203, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-203ENST00000421968 RASL11AQ6T310 242 aa7.05□□□□□ -1.28
UFD1-203ENST00000421968 SGK494Q96LW2 274 aa7.05□□□□□ -1.28
UFD1-203ENST00000421968 A0A1B0GW15 77 aa7.04□□□□□ -1.28
UFD1-203ENST00000421968 F2Z2F3 143 aa7.04□□□□□ -1.28
UFD1-203ENST00000421968 SH2D1AO60880 128 aa7.04□□□□□ -1.28
UFD1-203ENST00000421968 IGLV7-43P04211 117 aa7.04□□□□□ -1.28
UFD1-203ENST00000421968 CRIP1P50238 77 aa7.04□□□□□ -1.28
UFD1-203ENST00000421968 RBX1P62877 108 aa7.04□□□□□ -1.28
UFD1-203ENST00000421968 HIGD2BQ4VC39 106 aa7.04□□□□□ -1.28
UFD1-203ENST00000421968 PRR27Q6MZM9 219 aa7.04□□□□□ -1.28
UFD1-203ENST00000421968 ATP5L2Q7Z4Y8 100 aa7.04□□□□□ -1.28
UFD1-203ENST00000421968 C15orf56Q8N910 161 aa7.04□□□□□ -1.28
UFD1-203ENST00000421968 RETNLBQ9BQ08 111 aa7.04□□□□□ -1.28
UFD1-203ENST00000421968 JPT2Q9H910 190 aa7.04□□□□□ -1.28
UFD1-203ENST00000421968 NAT8BQ9UHF3 227 aa7.04□□□□□ -1.28
UFD1-203ENST00000421968 S100A8P05109 93 aa7.03□□□□□ -1.28
UFD1-203ENST00000421968 GZMBP10144 247 aa7.03□□□□□ -1.28
UFD1-203ENST00000421968 UBE2D3P61077 147 aa7.03□□□□□ -1.28
UFD1-203ENST00000421968 UBE2D2P62837 147 aa7.03□□□□□ -1.28
UFD1-203ENST00000421968 RPL36AP83881 106 aaKnown RBP7.03□□□□□ -1.28
UFD1-203ENST00000421968 REG3AQ06141 175 aa7.03□□□□□ -1.28
UFD1-203ENST00000421968 UFSP1Q6NVU6 142 aa7.03□□□□□ -1.28
UFD1-203ENST00000421968 CFAP161Q6P656 301 aa7.03□□□□□ -1.28
UFD1-203ENST00000421968 OR2D3Q8NGH3 330 aa7.03□□□□□ -1.28
UFD1-203ENST00000421968 RPL36ALQ969Q0 106 aaKnown RBP7.03□□□□□ -1.28
UFD1-203ENST00000421968 KRTAP4-1Q9BYQ7 146 aa7.03□□□□□ -1.28
UFD1-203ENST00000421968 RNASE7Q9H1E1 156 aaKnown RBP7.03□□□□□ -1.28
UFD1-203ENST00000421968 TRAV8-4A0A0B4J246 113 aa7.02□□□□□ -1.29
UFD1-203ENST00000421968 BORCS7Q96B45 105 aa7.02□□□□□ -1.29
UFD1-203ENST00000421968 TRBV7-3A0A075B6L6 115 aa7.01□□□□□ -1.29
UFD1-203ENST00000421968 OR5AL1P0C617 328 aa7.01□□□□□ -1.29
UFD1-203ENST00000421968 RNASE3P12724 160 aaKnown RBP7.01□□□□□ -1.29
UFD1-203ENST00000421968 ZNF80P51504 273 aaPredicted RBP7.01□□□□□ -1.29
UFD1-203ENST00000421968 PIK3CD-AS1Q5SR53 167 aa7.01□□□□□ -1.29
UFD1-203ENST00000421968 SSBP4Q9BWG4 385 aaPredicted RBP7.01□□□□□ -1.29
UFD1-203ENST00000421968 PKIGQ9Y2B9 76 aa7.01□□□□□ -1.29
UFD1-203ENST00000421968 RHODO00212 210 aa7□□□□□ -1.29
UFD1-203ENST00000421968 GAGE6Q13070 117 aa7□□□□□ -1.29
UFD1-203ENST00000421968 FAM74A4Q5TZK3 123 aa7□□□□□ -1.29
UFD1-203ENST00000421968 YPEL4Q96NS1 127 aa7□□□□□ -1.29
UFD1-203ENST00000421968 CNFNQ9BYD5 112 aa7□□□□□ -1.29
UFD1-203ENST00000421968 MRPL18Q9H0U6 180 aaKnown RBP7□□□□□ -1.29
UFD1-203ENST00000421968 C11orf21Q9P2W6 132 aa7□□□□□ -1.29
UFD1-203ENST00000421968 IGLV7-46A0A075B6I9 117 aa6.99□□□□□ -1.29
UFD1-203ENST00000421968 TRBV10-1A0A0K0K1A3 114 aa6.99□□□□□ -1.29
UFD1-203ENST00000421968 COLCA2A8K830 154 aa6.99□□□□□ -1.29
UFD1-203ENST00000421968 HIGD1CA8MV81 97 aa6.99□□□□□ -1.29
UFD1-203ENST00000421968 SNAI2O43623 268 aa6.99□□□□□ -1.29
UFD1-203ENST00000421968 IGLC6P0CF74 106 aa6.99□□□□□ -1.29
UFD1-203ENST00000421968 CTRLP40313 264 aa6.99□□□□□ -1.29
UFD1-203ENST00000421968 AMTP48728 403 aa6.99□□□□□ -1.29
UFD1-203ENST00000421968 RIGQ13278 110 aa6.99□□□□□ -1.29
UFD1-203ENST00000421968 CBLN2Q8IUK8 224 aa6.99□□□□□ -1.29
UFD1-203ENST00000421968 NUP35Q8NFH5 326 aa6.99□□□□□ -1.29
UFD1-203ENST00000421968 GNB1LQ9BYB4 327 aa6.99□□□□□ -1.29
UFD1-203ENST00000421968 IGKV3D-20A0A0C4DH25 116 aa6.98□□□□□ -1.29
UFD1-203ENST00000421968 A0A1B0GUT8 65 aa6.98□□□□□ -1.29
UFD1-203ENST00000421968 KRTAP10-6P60371 365 aaPredicted RBP6.98□□□□□ -1.29
UFD1-203ENST00000421968 MT1HP80294 61 aa6.98□□□□□ -1.29
UFD1-203ENST00000421968 A0A1W2PNN7 141 aa6.97□□□□□ -1.29
UFD1-203ENST00000421968 RAB5AP20339 215 aa6.97□□□□□ -1.29
UFD1-203ENST00000421968 S100A4P26447 101 aaKnown RBP6.97□□□□□ -1.29
UFD1-203ENST00000421968 GATD1Q8NB37 220 aa6.97□□□□□ -1.29
UFD1-203ENST00000421968 SCO1O75880 301 aa6.96□□□□□ -1.3
UFD1-203ENST00000421968 HBBP68871 147 aa6.96□□□□□ -1.3
UFD1-203ENST00000421968 ASB16-AS1Q495Z4 193 aa6.96□□□□□ -1.3
UFD1-203ENST00000421968 SMIM15Q7Z3B0 74 aa6.96□□□□□ -1.3
UFD1-203ENST00000421968 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.96□□□□□ -1.3
UFD1-203ENST00000421968 A0A1B0GXF2 115 aa6.95□□□□□ -1.3
UFD1-203ENST00000421968 GAGE12HA6NDE8 117 aa6.95□□□□□ -1.3
UFD1-203ENST00000421968 TRGC1P0CF51 173 aa6.95□□□□□ -1.3
UFD1-203ENST00000421968 PTTG1IPP53801 180 aa6.95□□□□□ -1.3
UFD1-203ENST00000421968 LYZL1Q6UWQ5 148 aa6.95□□□□□ -1.3
UFD1-203ENST00000421968 PHF5AQ7RTV0 110 aaKnown RBP6.95□□□□□ -1.3
UFD1-203ENST00000421968 ZFP82Q8N141 532 aa6.95□□□□□ -1.3
UFD1-203ENST00000421968 PHLDA3Q9Y5J5 127 aa6.95□□□□□ -1.3
UFD1-203ENST00000421968 TGIF2-C20orf24A0A0A6YYL0 155 aa6.94□□□□□ -1.3
UFD1-203ENST00000421968 ARMS2P0C7Q2 107 aa6.94□□□□□ -1.3
UFD1-203ENST00000421968 GAGE2BQ13066 116 aa6.94□□□□□ -1.3
UFD1-203ENST00000421968 NTM-AS1Q6ZSK4 140 aa6.94□□□□□ -1.3
UFD1-203ENST00000421968 C20orf203Q8NBC4 194 aa6.94□□□□□ -1.3
UFD1-203ENST00000421968 PGLYRP4Q96LB8 373 aa6.94□□□□□ -1.3
UFD1-203ENST00000421968 TMEM191AQ9H0A3 160 aa6.94□□□□□ -1.3
UFD1-203ENST00000421968 A0A087WZ39 114 aa6.93□□□□□ -1.3
UFD1-203ENST00000421968 GVQW2A0A096LPI5 108 aaPredicted RBP6.93□□□□□ -1.3
UFD1-203ENST00000421968 NTF3P20783 257 aa6.93□□□□□ -1.3
UFD1-203ENST00000421968 SPANXN1Q5VSR9 72 aa6.93□□□□□ -1.3
UFD1-203ENST00000421968 TMSB15BA0A087X1C1 80 aa6.92□□□□□ -1.3
UFD1-203ENST00000421968 GRIFINA4D1Z8 144 aa6.92□□□□□ -1.3
UFD1-203ENST00000421968 C1orf196B1AJZ1 125 aa6.92□□□□□ -1.3
UFD1-203ENST00000421968 PPP1R17O96001 155 aa6.92□□□□□ -1.3
UFD1-203ENST00000421968 PPBPP02775 128 aa6.92□□□□□ -1.3
UFD1-203ENST00000421968 TWIST1Q15672 202 aa6.92□□□□□ -1.3
UFD1-203ENST00000421968 TMEM97Q5BJF2 176 aa6.92□□□□□ -1.3
UFD1-203ENST00000421968 C9orf116Q5BN46 136 aaPredicted RBP6.92□□□□□ -1.3
UFD1-203ENST00000421968 CARD19Q96LW7 228 aa6.92□□□□□ -1.3
UFD1-203ENST00000421968 TRAPPC1Q9Y5R8 145 aa6.92□□□□□ -1.3
UFD1-203ENST00000421968 TRBV25-1A0A075B6N4 114 aa6.91□□□□□ -1.3
UFD1-203ENST00000421968 H3BVH4 76 aa6.91□□□□□ -1.3
UFD1-203ENST00000421968 RAB5BP61020 215 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 140.3 ms