RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 COX6A2Q02221 97 aa15.4■□□□□ 0.06
USP48-205ENST00000421625 RNF152Q8N8N0 203 aa15.39■□□□□ 0.06
USP48-205ENST00000421625 LINC00308Q8TCZ7 52 aa15.39■□□□□ 0.06
USP48-205ENST00000421625 PPDPFQ9H3Y8 114 aa15.39■□□□□ 0.06
USP48-205ENST00000421625 ZANQ9Y493 2812 aa15.39■□□□□ 0.05
USP48-205ENST00000421625 FBN2P35556 2912 aa15.39■□□□□ 0.05
USP48-205ENST00000421625 C10orf105Q8TEF2 133 aa15.39■□□□□ 0.05
USP48-205ENST00000421625 Q9H8V8 135 aa15.39■□□□□ 0.05
USP48-205ENST00000421625 IGHV4-59P01825 116 aa15.38■□□□□ 0.05
USP48-205ENST00000421625 Q8N2B8 174 aa15.38■□□□□ 0.05
USP48-205ENST00000421625 RBMY1BA6NDE4 496 aaKnown RBP15.38■□□□□ 0.05
USP48-205ENST00000421625 RBMY1EA6NEQ0 496 aaKnown RBP15.38■□□□□ 0.05
USP48-205ENST00000421625 RBMY1DP0C7P1 496 aaKnown RBP15.38■□□□□ 0.05
USP48-205ENST00000421625 IGHV4-30-2A0A087WSY4 118 aa15.37■□□□□ 0.05
USP48-205ENST00000421625 SMCR5Q8TEV8 140 aa15.37■□□□□ 0.05
USP48-205ENST00000421625 FAM236AA0A1B0GUQ0 79 aa15.37■□□□□ 0.05
USP48-205ENST00000421625 FAM236BA0A1B0GV22 79 aa15.37■□□□□ 0.05
USP48-205ENST00000421625 CCL19Q99731 98 aa15.37■□□□□ 0.05
USP48-205ENST00000421625 DEFB131AP59861 70 aa15.36■□□□□ 0.05
USP48-205ENST00000421625 SOSTDC1Q6X4U4 206 aa15.36■□□□□ 0.05
USP48-205ENST00000421625 CIRBPQ14011 172 aaKnown RBP15.36■□□□□ 0.05
USP48-205ENST00000421625 IGLV5-45A0A087WSX0 123 aa15.35■□□□□ 0.05
USP48-205ENST00000421625 COX7A2LO14548 114 aa15.35■□□□□ 0.05
USP48-205ENST00000421625 MSMBP08118 114 aa15.35■□□□□ 0.05
USP48-205ENST00000421625 HOXD3P31249 432 aaPredicted RBP15.35■□□□□ 0.05
USP48-205ENST00000421625 TIRAPP58753 221 aa15.35■□□□□ 0.05
USP48-205ENST00000421625 LINC01587Q99440 93 aa15.35■□□□□ 0.05
USP48-205ENST00000421625 ANKRD17O75179 2603 aaKnown RBP15.34■□□□□ 0.05
USP48-205ENST00000421625 IGHV3OR16-12A0A075B7B8 117 aa15.34■□□□□ 0.05
USP48-205ENST00000421625 NDUFA7O95182 113 aa15.33■□□□□ 0.04
USP48-205ENST00000421625 ZNF415Q09FC8 603 aa15.33■□□□□ 0.04
USP48-205ENST00000421625 DGAT2L7PQ6IED9 249 aa15.33■□□□□ 0.04
USP48-205ENST00000421625 ATP5J2P56134 94 aa15.32■□□□□ 0.04
USP48-205ENST00000421625 DAZ2Q13117 558 aaKnown RBP15.32■□□□□ 0.04
USP48-205ENST00000421625 DEFB112Q30KQ8 113 aa15.32■□□□□ 0.04
USP48-205ENST00000421625 LINC00242Q5T6M2 205 aa15.32■□□□□ 0.04
USP48-205ENST00000421625 DAZ4Q86SG3 579 aaKnown RBP15.32■□□□□ 0.04
USP48-205ENST00000421625 DAZ3Q9NR90 486 aaKnown RBP15.32■□□□□ 0.04
USP48-205ENST00000421625 UBR5O95071 2799 aaPredicted RBP15.32■□□□□ 0.04
USP48-205ENST00000421625 IGLV5-39A0A0G2JS06 123 aa15.31■□□□□ 0.04
USP48-205ENST00000421625 IGHV3-53P01767 116 aa15.31■□□□□ 0.04
USP48-205ENST00000421625 ACYP1P07311 99 aa15.3■□□□□ 0.04
USP48-205ENST00000421625 LINC00694P0DN24 101 aa15.29■□□□□ 0.04
USP48-205ENST00000421625 BEAN1Q3B7T3 259 aa15.29■□□□□ 0.04
USP48-205ENST00000421625 VPREB3Q9UKI3 123 aa15.29■□□□□ 0.04
USP48-205ENST00000421625 C11orf72Q8NBR9 251 aa15.29■□□□□ 0.04
USP48-205ENST00000421625 FAM218AQ96MZ4 157 aa15.29■□□□□ 0.04
USP48-205ENST00000421625 NAV2Q8IVL1 2488 aa15.28■□□□□ 0.04
USP48-205ENST00000421625 CHD6Q8TD26 2715 aa15.28■□□□□ 0.04
USP48-205ENST00000421625 TMEM89A2RUT3 159 aa15.28■□□□□ 0.04
USP48-205ENST00000421625 SMIM1B2RUZ4 78 aa15.28■□□□□ 0.04
USP48-205ENST00000421625 C22orf24Q9Y442 160 aa15.28■□□□□ 0.04
USP48-205ENST00000421625 HERVK_113P63121 156 aa15.28■□□□□ 0.04
USP48-205ENST00000421625 DEFB136Q30KP8 78 aa15.28■□□□□ 0.04
USP48-205ENST00000421625 DNAJC30Q96LL9 226 aa15.28■□□□□ 0.04
USP48-205ENST00000421625 BAALC-AS2P0C853 105 aa15.27■□□□□ 0.04
USP48-205ENST00000421625 SLURP1P55000 103 aa15.27■□□□□ 0.03
USP48-205ENST00000421625 IMUPQ9GZP8 106 aa15.27■□□□□ 0.03
USP48-205ENST00000421625 TRAV13-1A0A0B4J241 112 aa15.26■□□□□ 0.03
USP48-205ENST00000421625 PIK3CD-AS1Q5SR53 167 aa15.26■□□□□ 0.03
USP48-205ENST00000421625 PRIMA1Q86XR5 153 aa15.26■□□□□ 0.03
USP48-205ENST00000421625 C18orf65Q6ZTR6 163 aa15.26■□□□□ 0.03
USP48-205ENST00000421625 A8MTW9 85 aa15.25■□□□□ 0.03
USP48-205ENST00000421625 LINC00643Q86TS7 51 aa15.25■□□□□ 0.03
USP48-205ENST00000421625 ZNF843Q8N446 348 aa15.25■□□□□ 0.03
USP48-205ENST00000421625 TRACP01848 142 aa15.24■□□□□ 0.03
USP48-205ENST00000421625 TMEM126AQ9H061 195 aa15.24■□□□□ 0.03
USP48-205ENST00000421625 RS1O15537 224 aa15.23■□□□□ 0.03
USP48-205ENST00000421625 Q9HAA7 133 aa15.22■□□□□ 0.03
USP48-205ENST00000421625 TLN2Q9Y4G6 2542 aa15.22■□□□□ 0.03
USP48-205ENST00000421625 LOC107984640A0A0U1RRK4 108 aa15.21■□□□□ 0.03
USP48-205ENST00000421625 B4DSR2 109 aa15.21■□□□□ 0.03
USP48-205ENST00000421625 MAPK1IP1LQ8NDC0 245 aa15.21■□□□□ 0.03
USP48-205ENST00000421625 NBPF19A0A087WUL8 3843 aa15.21■□□□□ 0.02
USP48-205ENST00000421625 SDIM1Q6ZPB5 146 aa15.21■□□□□ 0.02
USP48-205ENST00000421625 UBE2E2Q96LR5 201 aa15.21■□□□□ 0.02
USP48-205ENST00000421625 C9orf153Q5TBE3 101 aa15.2■□□□□ 0.02
USP48-205ENST00000421625 COPS9Q8WXC6 57 aa15.2■□□□□ 0.02
USP48-205ENST00000421625 F5H768 121 aa15.19■□□□□ 0.02
USP48-205ENST00000421625 GAGE2AQ6NT46 116 aa15.19■□□□□ 0.02
USP48-205ENST00000421625 C3orf22Q8N5N4 141 aa15.19■□□□□ 0.02
USP48-205ENST00000421625 MAP6D1Q9H9H5 199 aa15.19■□□□□ 0.02
USP48-205ENST00000421625 NTM-AS1Q6ZSK4 140 aa15.18■□□□□ 0.02
USP48-205ENST00000421625 PEMTQ9UBM1 199 aa15.18■□□□□ 0.02
USP48-205ENST00000421625 CUBNO60494 3623 aa15.18■□□□□ 0.02
USP48-205ENST00000421625 CCDC168Q8NDH2 2452 aa15.18■□□□□ 0.02
USP48-205ENST00000421625 Q96MF0 132 aa15.17■□□□□ 0.02
USP48-205ENST00000421625 FAM19A3Q7Z5A8 133 aa15.17■□□□□ 0.02
USP48-205ENST00000421625 ZNF702PQ9H963 129 aa15.16■□□□□ 0.02
USP48-205ENST00000421625 INSP01308 110 aa15.16■□□□□ 0.02
USP48-205ENST00000421625 XCL2Q9UBD3 114 aa15.16■□□□□ 0.02
USP48-205ENST00000421625 HIST2H2BDQ6DRA6 164 aa15.16■□□□□ 0.02
USP48-205ENST00000421625 TENM4Q6N022 2769 aa15.15■□□□□ 0.02
USP48-205ENST00000421625 C5orf38Q86SI9 138 aa15.15■□□□□ 0.02
USP48-205ENST00000421625 MXRA5Q9NR99 2828 aa15.15■□□□□ 0.02
USP48-205ENST00000421625 FAM222AQ5U5X8 452 aa15.15■□□□□ 0.02
USP48-205ENST00000421625 HIST2H2BCQ6DN03 193 aa15.15■□□□□ 0.02
USP48-205ENST00000421625 KLK5Q9Y337 293 aaPredicted RBP15.15■□□□□ 0.02
USP48-205ENST00000421625 TEX15Q9BXT5 2789 aa15.14■□□□□ 0.01
USP48-205ENST00000421625 TRGV1A0A0A0MS02 117 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms