RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 ZNF25P17030 456 aaPredicted RBP11□□□□□ -0.65
MSH6-203ENST00000420813 FOXA3P55318 350 aaPredicted RBP11□□□□□ -0.65
MSH6-203ENST00000420813 CT83Q5H943 113 aa11□□□□□ -0.65
MSH6-203ENST00000420813 NAT8Q9UHE5 227 aa11□□□□□ -0.65
MSH6-203ENST00000420813 GVQW2A0A096LPI5 108 aaPredicted RBP10.99□□□□□ -0.65
MSH6-203ENST00000420813 I3L3M4 83 aa10.99□□□□□ -0.65
MSH6-203ENST00000420813 SCO1O75880 301 aa10.99□□□□□ -0.65
MSH6-203ENST00000420813 MT1HL1P0DM35 61 aa10.98□□□□□ -0.65
MSH6-203ENST00000420813 COX6A2Q02221 97 aa10.98□□□□□ -0.65
MSH6-203ENST00000420813 HIGD2BQ4VC39 106 aa10.98□□□□□ -0.65
MSH6-203ENST00000420813 OR5A1Q8NGJ0 315 aa10.98□□□□□ -0.65
MSH6-203ENST00000420813 PMCHP20382 165 aa10.97□□□□□ -0.65
MSH6-203ENST00000420813 FOXI1Q12951 378 aa10.97□□□□□ -0.65
MSH6-203ENST00000420813 C7orf33Q8WU49 177 aa10.97□□□□□ -0.65
MSH6-203ENST00000420813 BORCS7Q96B45 105 aa10.97□□□□□ -0.65
MSH6-203ENST00000420813 BTF3L4Q96K17 158 aa10.97□□□□□ -0.65
MSH6-203ENST00000420813 FAM231BA6NCW3 169 aa10.96□□□□□ -0.65
MSH6-203ENST00000420813 TMEM241Q24JQ0 296 aa10.96□□□□□ -0.65
MSH6-203ENST00000420813 PRSS3P2Q8NHM4 247 aa10.96□□□□□ -0.65
MSH6-203ENST00000420813 TMEM101Q96IK0 257 aa10.96□□□□□ -0.65
MSH6-203ENST00000420813 C7orf77A4D0Y5 90 aa10.95□□□□□ -0.66
MSH6-203ENST00000420813 PHOX2AO14813 284 aa10.95□□□□□ -0.66
MSH6-203ENST00000420813 ESDP10768 282 aa10.95□□□□□ -0.66
MSH6-203ENST00000420813 ADIRFQ15847 76 aa10.95□□□□□ -0.66
MSH6-203ENST00000420813 ST20Q9HBF5 79 aa10.95□□□□□ -0.66
MSH6-203ENST00000420813 RPS10P5Q9NQ39 176 aa10.95□□□□□ -0.66
MSH6-203ENST00000420813 TSHBP01222 138 aa10.94□□□□□ -0.66
MSH6-203ENST00000420813 MAJINQ3KP22 176 aa10.94□□□□□ -0.66
MSH6-203ENST00000420813 MRAP2Q96G30 205 aa10.94□□□□□ -0.66
MSH6-203ENST00000420813 TMEM191AQ9H0A3 160 aa10.94□□□□□ -0.66
MSH6-203ENST00000420813 PKIGQ9Y2B9 76 aa10.94□□□□□ -0.66
MSH6-203ENST00000420813 IGKV2-24A0A0C4DH68 120 aa10.93□□□□□ -0.66
MSH6-203ENST00000420813 LINC00959A0A1B0GUT2 108 aa10.93□□□□□ -0.66
MSH6-203ENST00000420813 A0A1B0GUT8 65 aa10.93□□□□□ -0.66
MSH6-203ENST00000420813 RPL23P62829 140 aaKnown RBP10.93□□□□□ -0.66
MSH6-203ENST00000420813 MRPL52Q86TS9 123 aaKnown RBP10.93□□□□□ -0.66
MSH6-203ENST00000420813 TSKUQ8WUA8 353 aa10.93□□□□□ -0.66
MSH6-203ENST00000420813 SMCO4Q9NRQ5 59 aa10.93□□□□□ -0.66
MSH6-203ENST00000420813 IGHV1-58A0A0C4DH39 117 aa10.92□□□□□ -0.66
MSH6-203ENST00000420813 TRBV27A0A0K0K1C4 114 aa10.92□□□□□ -0.66
MSH6-203ENST00000420813 HIGD1CA8MV81 97 aa10.92□□□□□ -0.66
MSH6-203ENST00000420813 CCL25O15444 150 aa10.92□□□□□ -0.66
MSH6-203ENST00000420813 GAS8-AS1O95177 125 aa10.92□□□□□ -0.66
MSH6-203ENST00000420813 XCL1P47992 114 aa10.92□□□□□ -0.66
MSH6-203ENST00000420813 POLR2KP53803 58 aaKnown RBP10.92□□□□□ -0.66
MSH6-203ENST00000420813 LINC01551Q86U37 167 aa10.92□□□□□ -0.66
MSH6-203ENST00000420813 CBLN2Q8IUK8 224 aa10.92□□□□□ -0.66
MSH6-203ENST00000420813 STPG4Q8N801 248 aa10.92□□□□□ -0.66
MSH6-203ENST00000420813 TMEM242Q9NWH2 141 aa10.92□□□□□ -0.66
MSH6-203ENST00000420813 LINC00474Q9P2X8 69 aa10.92□□□□□ -0.66
MSH6-203ENST00000420813 UBR4Q5T4S7 5183 aa10.92□□□□□ -0.66
MSH6-203ENST00000420813 CTDSP1Q9GZU7 261 aa10.91□□□□□ -0.66
MSH6-203ENST00000420813 OSTCQ9NRP0 149 aa10.91□□□□□ -0.66
MSH6-203ENST00000420813 CDC42SE2Q9NRR3 84 aa10.91□□□□□ -0.66
MSH6-203ENST00000420813 A0A096LNI7 61 aa10.9□□□□□ -0.66
MSH6-203ENST00000420813 MT-ND4LP03901 98 aa10.9□□□□□ -0.66
MSH6-203ENST00000420813 RAB4AP20338 218 aa10.9□□□□□ -0.66
MSH6-203ENST00000420813 SS18Q15532 418 aa10.9□□□□□ -0.66
MSH6-203ENST00000420813 PRR3P79522 188 aaKnown RBP10.89□□□□□ -0.67
MSH6-203ENST00000420813 CD164L2Q6UWJ8 174 aa10.89□□□□□ -0.67
MSH6-203ENST00000420813 ISOC2Q96AB3 205 aa10.89□□□□□ -0.67
MSH6-203ENST00000420813 PPP1R2P9O14990 202 aa10.88□□□□□ -0.67
MSH6-203ENST00000420813 AMN1Q8IY45 258 aa10.88□□□□□ -0.67
MSH6-203ENST00000420813 ZNF664Q8N3J9 261 aa10.88□□□□□ -0.67
MSH6-203ENST00000420813 ANAPC16Q96DE5 110 aa10.88□□□□□ -0.67
MSH6-203ENST00000420813 CARD19Q96LW7 228 aa10.88□□□□□ -0.67
MSH6-203ENST00000420813 PPP1R17O96001 155 aa10.87□□□□□ -0.67
MSH6-203ENST00000420813 ZNF561-AS1K7EIQ3 104 aa10.86□□□□□ -0.67
MSH6-203ENST00000420813 VCYO14598 125 aa10.86□□□□□ -0.67
MSH6-203ENST00000420813 RIGQ13278 110 aa10.86□□□□□ -0.67
MSH6-203ENST00000420813 LINC00526Q96FQ7 95 aa10.86□□□□□ -0.67
MSH6-203ENST00000420813 CSDC2Q9Y534 153 aaKnown RBP10.86□□□□□ -0.67
MSH6-203ENST00000420813 SYCNQ0VAF6 134 aa10.85□□□□□ -0.67
MSH6-203ENST00000420813 SMAGPQ0VAQ4 97 aa10.85□□□□□ -0.67
MSH6-203ENST00000420813 LINC01600Q96MT4 127 aa10.85□□□□□ -0.67
MSH6-203ENST00000420813 V9GYV3 84 aa10.85□□□□□ -0.67
MSH6-203ENST00000420813 TNXBP22105 4242 aa10.84□□□□□ -0.67
MSH6-203ENST00000420813 C1orf196B1AJZ1 125 aa10.84□□□□□ -0.67
MSH6-203ENST00000420813 FCER1GP30273 86 aa10.84□□□□□ -0.67
MSH6-203ENST00000420813 NUP35Q8NFH5 326 aa10.84□□□□□ -0.67
MSH6-203ENST00000420813 S100PP25815 95 aa10.83□□□□□ -0.68
MSH6-203ENST00000420813 CAMPP49913 170 aa10.83□□□□□ -0.68
MSH6-203ENST00000420813 SUMO2P61956 95 aaKnown RBP10.83□□□□□ -0.68
MSH6-203ENST00000420813 NRACQ8N912 160 aa10.83□□□□□ -0.68
MSH6-203ENST00000420813 KIR2DL4Q99706 377 aa10.83□□□□□ -0.68
MSH6-203ENST00000420813 SMKR1H3BMG3 65 aa10.82□□□□□ -0.68
MSH6-203ENST00000420813 SPINK6Q6UWN8 80 aa10.82□□□□□ -0.68
MSH6-203ENST00000420813 NAT8BQ9UHF3 227 aa10.82□□□□□ -0.68
MSH6-203ENST00000420813 UBE2D4Q9Y2X8 147 aa10.82□□□□□ -0.68
MSH6-203ENST00000420813 COX7A2LO14548 114 aa10.81□□□□□ -0.68
MSH6-203ENST00000420813 MALP21145 153 aa10.81□□□□□ -0.68
MSH6-203ENST00000420813 PTTG1IPP53801 180 aa10.81□□□□□ -0.68
MSH6-203ENST00000420813 YPEL4Q96NS1 127 aa10.81□□□□□ -0.68
MSH6-203ENST00000420813 IMMP2LQ96T52 175 aa10.81□□□□□ -0.68
MSH6-203ENST00000420813 IGLV4-69A0A075B6H9 119 aa10.8□□□□□ -0.68
MSH6-203ENST00000420813 LOC107984640A0A0U1RRK4 108 aa10.8□□□□□ -0.68
MSH6-203ENST00000420813 Q6ZRP5 223 aa10.8□□□□□ -0.68
MSH6-203ENST00000420813 TIMM21Q9BVV7 248 aa10.8□□□□□ -0.68
MSH6-203ENST00000420813 COLCA2A8K830 154 aa10.79□□□□□ -0.68
MSH6-203ENST00000420813 FAM104BQ5XKR9 115 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 141.2 ms