RNA–Protein interactions for RNA: ENST00000420455.5

TMEM50B-201, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 3,062 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-201ENST00000420455 CELA1Q9UNI1 258 aa9.4□□□□□ -0.91
TMEM50B-201ENST00000420455 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.39□□□□□ -0.91
TMEM50B-201ENST00000420455 TEX48A0A1B0GUV7 120 aa9.39□□□□□ -0.91
TMEM50B-201ENST00000420455 IGKV2-29A2NJV5 120 aaPredicted RBP9.39□□□□□ -0.91
TMEM50B-201ENST00000420455 K7EP13 123 aa9.39□□□□□ -0.91
TMEM50B-201ENST00000420455 TSPEAR-AS2P59090 65 aa9.39□□□□□ -0.91
TMEM50B-201ENST00000420455 CSDC2Q9Y534 153 aaKnown RBP9.39□□□□□ -0.91
TMEM50B-201ENST00000420455 LOC100131303A0A0U1RQF7 123 aa9.38□□□□□ -0.91
TMEM50B-201ENST00000420455 MRPS36P82909 103 aaKnown RBP9.38□□□□□ -0.91
TMEM50B-201ENST00000420455 PRO0255Q9UI72 69 aa9.38□□□□□ -0.91
TMEM50B-201ENST00000420455 GAGE12JA6NER3 117 aa9.38□□□□□ -0.91
TMEM50B-201ENST00000420455 SPART-AS1P0CW21 52 aa9.38□□□□□ -0.91
TMEM50B-201ENST00000420455 GAGE1Q13065 139 aa9.38□□□□□ -0.91
TMEM50B-201ENST00000420455 GAGE4Q13068 117 aa9.38□□□□□ -0.91
TMEM50B-201ENST00000420455 GAGE5Q13069 117 aa9.38□□□□□ -0.91
TMEM50B-201ENST00000420455 GAGE13Q4V321 117 aa9.38□□□□□ -0.91
TMEM50B-201ENST00000420455 MYMXA0A1B0GTQ4 84 aa9.37□□□□□ -0.91
TMEM50B-201ENST00000420455 H7C423 109 aa9.37□□□□□ -0.91
TMEM50B-201ENST00000420455 RNASE13Q5GAN3 156 aaKnown RBP9.37□□□□□ -0.91
TMEM50B-201ENST00000420455 ORAOV1Q8WV07 137 aa9.37□□□□□ -0.91
TMEM50B-201ENST00000420455 SEC11AP67812 179 aa9.37□□□□□ -0.91
TMEM50B-201ENST00000420455 DEFB4AO15263 64 aa9.37□□□□□ -0.91
TMEM50B-201ENST00000420455 FXYD2P54710 66 aa9.37□□□□□ -0.91
TMEM50B-201ENST00000420455 PAPPA-AS1Q5QFB9 102 aa9.37□□□□□ -0.91
TMEM50B-201ENST00000420455 HUWE1Q7Z6Z7 4374 aaKnown RBP9.36□□□□□ -0.91
TMEM50B-201ENST00000420455 A0A0J9YXV3 536 aa9.36□□□□□ -0.91
TMEM50B-201ENST00000420455 ZNF22P17026 224 aaPredicted RBP9.36□□□□□ -0.91
TMEM50B-201ENST00000420455 Q6ZUT4 128 aa9.36□□□□□ -0.91
TMEM50B-201ENST00000420455 VCX2Q9H322 139 aa9.36□□□□□ -0.91
TMEM50B-201ENST00000420455 DAD1P61803 113 aa9.35□□□□□ -0.91
TMEM50B-201ENST00000420455 PLEKHB2Q96CS7 222 aa9.35□□□□□ -0.91
TMEM50B-201ENST00000420455 VSIG2Q96IQ7 327 aa9.35□□□□□ -0.91
TMEM50B-201ENST00000420455 TMEM223A0PJW6 202 aa9.35□□□□□ -0.91
TMEM50B-201ENST00000420455 K7EIL1 84 aa9.35□□□□□ -0.91
TMEM50B-201ENST00000420455 ATP5G1P05496 136 aa9.35□□□□□ -0.91
TMEM50B-201ENST00000420455 TMEM170BQ5T4T1 132 aa9.35□□□□□ -0.91
TMEM50B-201ENST00000420455 FAM19A3Q7Z5A8 133 aa9.35□□□□□ -0.91
TMEM50B-201ENST00000420455 TM2D2Q9BX73 214 aa9.35□□□□□ -0.91
TMEM50B-201ENST00000420455 TRAV26-1A0A087WT03 109 aa9.34□□□□□ -0.91
TMEM50B-201ENST00000420455 RETNQ9HD89 108 aa9.34□□□□□ -0.91
TMEM50B-201ENST00000420455 CEND1Q8N111 149 aa9.33□□□□□ -0.92
TMEM50B-201ENST00000420455 TM2D3Q9BRN9 247 aa9.33□□□□□ -0.92
TMEM50B-201ENST00000420455 TRBV6-8A0A0A6YYG3 113 aa9.33□□□□□ -0.92
TMEM50B-201ENST00000420455 C12orf74Q32Q52 190 aa9.33□□□□□ -0.92
TMEM50B-201ENST00000420455 ZNF815PA8K554 130 aa9.33□□□□□ -0.92
TMEM50B-201ENST00000420455 GYPEP15421 78 aa9.33□□□□□ -0.92
TMEM50B-201ENST00000420455 GCSHP23434 173 aa9.33□□□□□ -0.92
TMEM50B-201ENST00000420455 TMEM243Q9BU79 118 aa9.32□□□□□ -0.92
TMEM50B-201ENST00000420455 PAX4O43316 350 aa9.31□□□□□ -0.92
TMEM50B-201ENST00000420455 SMAGPQ0VAQ4 97 aa9.31□□□□□ -0.92
TMEM50B-201ENST00000420455 CCL25O15444 150 aa9.31□□□□□ -0.92
TMEM50B-201ENST00000420455 ATP6V0E2Q8NHE4 81 aa9.31□□□□□ -0.92
TMEM50B-201ENST00000420455 H3BNG1 76 aa9.3□□□□□ -0.92
TMEM50B-201ENST00000420455 K7ERJ3 54 aa9.3□□□□□ -0.92
TMEM50B-201ENST00000420455 UBE2D1P51668 147 aa9.3□□□□□ -0.92
TMEM50B-201ENST00000420455 HERVK_113P61574 105 aa9.3□□□□□ -0.92
TMEM50B-201ENST00000420455 CDC42SE2Q9NRR3 84 aa9.3□□□□□ -0.92
TMEM50B-201ENST00000420455 A6NDN8 102 aa9.3□□□□□ -0.92
TMEM50B-201ENST00000420455 H3BRM9 83 aa9.3□□□□□ -0.92
TMEM50B-201ENST00000420455 J3QQQ9 107 aa9.3□□□□□ -0.92
TMEM50B-201ENST00000420455 TAL2Q16559 108 aa9.3□□□□□ -0.92
TMEM50B-201ENST00000420455 A0A0J9YY99 117 aa9.3□□□□□ -0.92
TMEM50B-201ENST00000420455 TINCRA0A1B0GVN0 87 aa9.3□□□□□ -0.92
TMEM50B-201ENST00000420455 DNAH9Q9NYC9 4486 aa9.29□□□□□ -0.92
TMEM50B-201ENST00000420455 IGHV3-64A0A075B6Q5 118 aa9.29□□□□□ -0.92
TMEM50B-201ENST00000420455 LEPROTO15243 131 aa9.29□□□□□ -0.92
TMEM50B-201ENST00000420455 OR5A1Q8NGJ0 315 aa9.29□□□□□ -0.92
TMEM50B-201ENST00000420455 IGLV5-45A0A087WSX0 123 aa9.28□□□□□ -0.92
TMEM50B-201ENST00000420455 UBE2V1Q13404 147 aa9.28□□□□□ -0.92
TMEM50B-201ENST00000420455 SPATA25Q9BR10 227 aa9.28□□□□□ -0.92
TMEM50B-201ENST00000420455 HIST1H4GQ99525 98 aa9.28□□□□□ -0.92
TMEM50B-201ENST00000420455 NAA38Q9BRA0 125 aaKnown RBP9.28□□□□□ -0.92
TMEM50B-201ENST00000420455 TRAV8-3A0A0A6YYJ7 113 aa9.28□□□□□ -0.92
TMEM50B-201ENST00000420455 C9orf118A6NHY6 69 aa9.28□□□□□ -0.92
TMEM50B-201ENST00000420455 TIRAPP58753 221 aa9.28□□□□□ -0.92
TMEM50B-201ENST00000420455 SH2D6Q7Z4S9 175 aa9.28□□□□□ -0.92
TMEM50B-201ENST00000420455 COX6A2Q02221 97 aa9.27□□□□□ -0.93
TMEM50B-201ENST00000420455 NBEAL1Q6ZS30 2694 aa9.27□□□□□ -0.93
TMEM50B-201ENST00000420455 IGHV3-30-3P0DP02 117 aa9.27□□□□□ -0.93
TMEM50B-201ENST00000420455 AMMECR1LQ6DCA0 310 aa9.27□□□□□ -0.93
TMEM50B-201ENST00000420455 RAB37Q96AX2 223 aa9.27□□□□□ -0.93
TMEM50B-201ENST00000420455 A0A1B0GUV1 79 aa9.26□□□□□ -0.93
TMEM50B-201ENST00000420455 C10orf126Q8N4M7 172 aa9.26□□□□□ -0.93
TMEM50B-201ENST00000420455 A0A0J9YWU9 116 aa9.26□□□□□ -0.93
TMEM50B-201ENST00000420455 F5H768 121 aa9.26□□□□□ -0.93
TMEM50B-201ENST00000420455 NHP2Q9NX24 153 aaKnown RBP9.26□□□□□ -0.93
TMEM50B-201ENST00000420455 A0A1B0GWB2 263 aa9.25□□□□□ -0.93
TMEM50B-201ENST00000420455 UBE2L6O14933 153 aa9.25□□□□□ -0.93
TMEM50B-201ENST00000420455 PRB2P02812 416 aaPredicted RBP9.25□□□□□ -0.93
TMEM50B-201ENST00000420455 LINC00242Q5T6M2 205 aa9.25□□□□□ -0.93
TMEM50B-201ENST00000420455 SCGB1D4Q6XE38 83 aa9.25□□□□□ -0.93
TMEM50B-201ENST00000420455 MRPL23Q16540 153 aaKnown RBP9.25□□□□□ -0.93
TMEM50B-201ENST00000420455 CDKN2A-AS1Q9UH64 79 aa9.25□□□□□ -0.93
TMEM50B-201ENST00000420455 A0A096LPF7 62 aa9.25□□□□□ -0.93
TMEM50B-201ENST00000420455 VAMP3Q15836 100 aa9.25□□□□□ -0.93
TMEM50B-201ENST00000420455 IGHV1-58A0A0C4DH39 117 aa9.24□□□□□ -0.93
TMEM50B-201ENST00000420455 H3BUT2 72 aa9.24□□□□□ -0.93
TMEM50B-201ENST00000420455 LGALS3P17931 250 aaKnown RBP9.24□□□□□ -0.93
TMEM50B-201ENST00000420455 PTTG1IPP53801 180 aa9.24□□□□□ -0.93
TMEM50B-201ENST00000420455 TMEM101Q96IK0 257 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms