RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 HRCT1Q6UXD1 115 aa5.81□□□□□ -1.48
HMGXB4-202ENST00000418170 ZNF625Q96I27 306 aaPredicted RBP5.81□□□□□ -1.48
HMGXB4-202ENST00000418170 USMG5Q96IX5 58 aa5.81□□□□□ -1.48
HMGXB4-202ENST00000418170 PRORYQ9H606 182 aa5.81□□□□□ -1.48
HMGXB4-202ENST00000418170 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.81□□□□□ -1.48
HMGXB4-202ENST00000418170 IGKV2-29A2NJV5 120 aaPredicted RBP5.81□□□□□ -1.48
HMGXB4-202ENST00000418170 IGHV3-11P01762 117 aa5.81□□□□□ -1.48
HMGXB4-202ENST00000418170 MOB4Q9Y3A3 225 aa5.81□□□□□ -1.48
HMGXB4-202ENST00000418170 A0A087WVE0 104 aa5.81□□□□□ -1.48
HMGXB4-202ENST00000418170 PROK1P58294 105 aa5.81□□□□□ -1.48
HMGXB4-202ENST00000418170 LINC00467Q9BRT7 94 aa5.81□□□□□ -1.48
HMGXB4-202ENST00000418170 LINC00846Q9NV44 126 aa5.81□□□□□ -1.48
HMGXB4-202ENST00000418170 IGHV3-73A0A0B4J1V6 119 aa5.8□□□□□ -1.48
HMGXB4-202ENST00000418170 IGKV3-20P01619 116 aa5.8□□□□□ -1.48
HMGXB4-202ENST00000418170 RPL28P46779 137 aaKnown RBP5.8□□□□□ -1.48
HMGXB4-202ENST00000418170 RNF152Q8N8N0 203 aa5.8□□□□□ -1.48
HMGXB4-202ENST00000418170 SYNJ2BPP57105 145 aa5.8□□□□□ -1.48
HMGXB4-202ENST00000418170 MRAPQ8TCY5 172 aa5.8□□□□□ -1.48
HMGXB4-202ENST00000418170 OBSCN-AS1Q96MR7 158 aa5.8□□□□□ -1.48
HMGXB4-202ENST00000418170 EDN2P20800 178 aa5.8□□□□□ -1.48
HMGXB4-202ENST00000418170 COX6A2Q02221 97 aa5.8□□□□□ -1.48
HMGXB4-202ENST00000418170 SPINK13Q1W4C9 94 aa5.8□□□□□ -1.48
HMGXB4-202ENST00000418170 C14orf132Q9NPU4 83 aa5.8□□□□□ -1.48
HMGXB4-202ENST00000418170 UBR5O95071 2799 aaPredicted RBP5.8□□□□□ -1.48
HMGXB4-202ENST00000418170 TLN1Q9Y490 2541 aaKnown RBP5.8□□□□□ -1.48
HMGXB4-202ENST00000418170 PF4P02776 101 aa5.79□□□□□ -1.48
HMGXB4-202ENST00000418170 C9orf129Q5T035 196 aaKnown RBP5.79□□□□□ -1.48
HMGXB4-202ENST00000418170 OVOL2Q9BRP0 275 aa5.79□□□□□ -1.48
HMGXB4-202ENST00000418170 Q9UF83 564 aa5.79□□□□□ -1.48
HMGXB4-202ENST00000418170 PTPRQQ9UMZ3 2332 aa5.79□□□□□ -1.48
HMGXB4-202ENST00000418170 IGF2RP11717 2491 aa5.79□□□□□ -1.48
HMGXB4-202ENST00000418170 DOPEY2Q9Y3R5 2298 aa5.79□□□□□ -1.48
HMGXB4-202ENST00000418170 H3BUA1 57 aa5.79□□□□□ -1.48
HMGXB4-202ENST00000418170 K7ENP7 123 aa5.79□□□□□ -1.48
HMGXB4-202ENST00000418170 HOXD3P31249 432 aaPredicted RBP5.79□□□□□ -1.48
HMGXB4-202ENST00000418170 C11orf71Q6IPW1 123 aa5.79□□□□□ -1.48
HMGXB4-202ENST00000418170 K7EMT4 169 aa5.79□□□□□ -1.48
HMGXB4-202ENST00000418170 TENM4Q6N022 2769 aa5.78□□□□□ -1.48
HMGXB4-202ENST00000418170 TRAV13-2A0A0B4J235 113 aa5.78□□□□□ -1.48
HMGXB4-202ENST00000418170 SMIM1B2RUZ4 78 aa5.78□□□□□ -1.48
HMGXB4-202ENST00000418170 NDUFC2-KCTD14E9PQ53 114 aa5.78□□□□□ -1.48
HMGXB4-202ENST00000418170 CHD8Q9HCK8 2581 aa5.78□□□□□ -1.48
HMGXB4-202ENST00000418170 GRNP28799 593 aaKnown RBP5.78□□□□□ -1.48
HMGXB4-202ENST00000418170 FHL2Q14192 279 aa5.78□□□□□ -1.48
HMGXB4-202ENST00000418170 LINC00242Q5T6M2 205 aa5.78□□□□□ -1.48
HMGXB4-202ENST00000418170 IGHV3OR16-12A0A075B7B8 117 aa5.78□□□□□ -1.48
HMGXB4-202ENST00000418170 SPTBN1Q01082 2364 aaKnown RBP5.78□□□□□ -1.48
HMGXB4-202ENST00000418170 ACACAQ13085 2346 aa5.77□□□□□ -1.49
HMGXB4-202ENST00000418170 PIK3CD-AS1Q5SR53 167 aa5.77□□□□□ -1.49
HMGXB4-202ENST00000418170 NDUFC2O95298 119 aa5.77□□□□□ -1.49
HMGXB4-202ENST00000418170 Q6ZSN1 163 aa5.77□□□□□ -1.49
HMGXB4-202ENST00000418170 A0A087WYN8 130 aa5.77□□□□□ -1.49
HMGXB4-202ENST00000418170 CRPP02741 224 aa5.77□□□□□ -1.49
HMGXB4-202ENST00000418170 SNRPD3P62318 126 aaKnown RBP5.77□□□□□ -1.49
HMGXB4-202ENST00000418170 FAM19A3Q7Z5A8 133 aa5.77□□□□□ -1.49
HMGXB4-202ENST00000418170 CDSNQ15517 529 aa5.76□□□□□ -1.49
HMGXB4-202ENST00000418170 DGAT2L7PQ6IED9 249 aa5.76□□□□□ -1.49
HMGXB4-202ENST00000418170 LINC00337Q8N6G1 96 aa5.76□□□□□ -1.49
HMGXB4-202ENST00000418170 KNCNA6PVL3 124 aa5.76□□□□□ -1.49
HMGXB4-202ENST00000418170 C10orf105Q8TEF2 133 aa5.76□□□□□ -1.49
HMGXB4-202ENST00000418170 IGHV3-38A0A0C4DH36 116 aa5.75□□□□□ -1.49
HMGXB4-202ENST00000418170 FBXL19-AS1Q494R0 122 aa5.75□□□□□ -1.49
HMGXB4-202ENST00000418170 K7EQG2 157 aa5.75□□□□□ -1.49
HMGXB4-202ENST00000418170 RBMY1A1P0DJD3 496 aaKnown RBP5.75□□□□□ -1.49
HMGXB4-202ENST00000418170 RBMY1CP0DJD4 496 aa5.75□□□□□ -1.49
HMGXB4-202ENST00000418170 RBMY1FQ15415 496 aaKnown RBP5.75□□□□□ -1.49
HMGXB4-202ENST00000418170 IGKV2-28A0A075B6P5 120 aa5.75□□□□□ -1.49
HMGXB4-202ENST00000418170 H0YGX0 51 aa5.75□□□□□ -1.49
HMGXB4-202ENST00000418170 IGKV2D-28P01615 120 aa5.75□□□□□ -1.49
HMGXB4-202ENST00000418170 UCNP55089 124 aa5.75□□□□□ -1.49
HMGXB4-202ENST00000418170 ATRXP46100 2492 aa5.75□□□□□ -1.49
HMGXB4-202ENST00000418170 SMIM11BQ8TCY0 68 aa5.75□□□□□ -1.49
HMGXB4-202ENST00000418170 PIEZO1Q92508 2521 aa5.74□□□□□ -1.49
HMGXB4-202ENST00000418170 COL6A6A6NMZ7 2263 aa5.74□□□□□ -1.49
HMGXB4-202ENST00000418170 IGLV1-40P01703 118 aa5.74□□□□□ -1.49
HMGXB4-202ENST00000418170 IGHV3-53P01767 116 aa5.74□□□□□ -1.49
HMGXB4-202ENST00000418170 EPM2AB3EWF7 344 aa5.74□□□□□ -1.49
HMGXB4-202ENST00000418170 NCR3O14931 201 aa5.74□□□□□ -1.49
HMGXB4-202ENST00000418170 GHRHP01286 108 aa5.74□□□□□ -1.49
HMGXB4-202ENST00000418170 HTN1P15515 57 aa5.74□□□□□ -1.49
HMGXB4-202ENST00000418170 PIMREGQ9BSJ6 248 aa5.74□□□□□ -1.49
HMGXB4-202ENST00000418170 PFN2P35080 140 aa5.73□□□□□ -1.49
HMGXB4-202ENST00000418170 SORL1Q92673 2214 aa5.73□□□□□ -1.49
HMGXB4-202ENST00000418170 ATP5EP2Q5VTU8 51 aa5.73□□□□□ -1.49
HMGXB4-202ENST00000418170 SND1-IT1Q9HBX3 110 aa5.73□□□□□ -1.49
HMGXB4-202ENST00000418170 HILS1P60008 231 aa5.73□□□□□ -1.49
HMGXB4-202ENST00000418170 S100A7L2Q5SY68 101 aa5.73□□□□□ -1.49
HMGXB4-202ENST00000418170 TMEM243Q9BU79 118 aa5.73□□□□□ -1.49
HMGXB4-202ENST00000418170 PRO0628Q9UI54 55 aa5.73□□□□□ -1.49
HMGXB4-202ENST00000418170 USP24Q9UPU5 2620 aa5.73□□□□□ -1.49
HMGXB4-202ENST00000418170 LECT2O14960 151 aa5.72□□□□□ -1.49
HMGXB4-202ENST00000418170 CCKP06307 115 aa5.72□□□□□ -1.49
HMGXB4-202ENST00000418170 FAM236DA0A1B0GTK5 79 aa5.72□□□□□ -1.49
HMGXB4-202ENST00000418170 FAM236CP0DP71 79 aa5.72□□□□□ -1.49
HMGXB4-202ENST00000418170 LMO4P61968 165 aa5.72□□□□□ -1.49
HMGXB4-202ENST00000418170 RBMY1BA6NDE4 496 aaKnown RBP5.72□□□□□ -1.49
HMGXB4-202ENST00000418170 RBMY1EA6NEQ0 496 aaKnown RBP5.72□□□□□ -1.49
HMGXB4-202ENST00000418170 RBMY1DP0C7P1 496 aaKnown RBP5.72□□□□□ -1.49
HMGXB4-202ENST00000418170 SS18Q15532 418 aa5.72□□□□□ -1.49
HMGXB4-202ENST00000418170 MIR7-3HGQ8N6C7 128 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms