RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 A0A096LNI7 61 aa13.7□□□□□ -0.22
ACTB-203ENST00000417101 A0A1B0GUT8 65 aa13.7□□□□□ -0.22
ACTB-203ENST00000417101 HIGD1CA8MV81 97 aa13.7□□□□□ -0.22
ACTB-203ENST00000417101 TSKUQ8WUA8 353 aa13.7□□□□□ -0.22
ACTB-203ENST00000417101 LINC00526Q96FQ7 95 aa13.7□□□□□ -0.22
ACTB-203ENST00000417101 TMEM191AQ9H0A3 160 aa13.7□□□□□ -0.22
ACTB-203ENST00000417101 LINC01551Q86U37 167 aa13.69□□□□□ -0.22
ACTB-203ENST00000417101 EIF5A2Q9GZV4 153 aaKnown RBP13.69□□□□□ -0.22
ACTB-203ENST00000417101 IGHV1-58A0A0C4DH39 117 aa13.68□□□□□ -0.22
ACTB-203ENST00000417101 POLR2KP53803 58 aaKnown RBP13.68□□□□□ -0.22
ACTB-203ENST00000417101 RAB4AP20338 218 aa13.67□□□□□ -0.22
ACTB-203ENST00000417101 SS18Q15532 418 aa13.67□□□□□ -0.22
ACTB-203ENST00000417101 MRPL52Q86TS9 123 aaKnown RBP13.67□□□□□ -0.22
ACTB-203ENST00000417101 AMN1Q8IY45 258 aa13.67□□□□□ -0.22
ACTB-203ENST00000417101 FAM210AQ96ND0 272 aa13.67□□□□□ -0.22
ACTB-203ENST00000417101 CDC42SE2Q9NRR3 84 aa13.67□□□□□ -0.22
ACTB-203ENST00000417101 hCG_2014768A0A024R1R8 64 aa13.66□□□□□ -0.22
ACTB-203ENST00000417101 TRBV27A0A0K0K1C4 114 aa13.66□□□□□ -0.22
ACTB-203ENST00000417101 PRR3P79522 188 aaKnown RBP13.66□□□□□ -0.22
ACTB-203ENST00000417101 OSTCQ9NRP0 149 aa13.66□□□□□ -0.22
ACTB-203ENST00000417101 C7orf77A4D0Y5 90 aa13.65□□□□□ -0.22
ACTB-203ENST00000417101 ZNF727A8MUV8 499 aa13.65□□□□□ -0.22
ACTB-203ENST00000417101 CD164L2Q6UWJ8 174 aa13.65□□□□□ -0.22
ACTB-203ENST00000417101 ZNF664Q8N3J9 261 aa13.65□□□□□ -0.22
ACTB-203ENST00000417101 CARD19Q96LW7 228 aa13.65□□□□□ -0.22
ACTB-203ENST00000417101 LINC00474Q9P2X8 69 aa13.65□□□□□ -0.22
ACTB-203ENST00000417101 SMKR1H3BMG3 65 aa13.64□□□□□ -0.23
ACTB-203ENST00000417101 PKIGQ9Y2B9 76 aa13.64□□□□□ -0.23
ACTB-203ENST00000417101 ZNF561-AS1K7EIQ3 104 aa13.63□□□□□ -0.23
ACTB-203ENST00000417101 VCYO14598 125 aa13.62□□□□□ -0.23
ACTB-203ENST00000417101 SRP19P09132 144 aaKnown RBP13.62□□□□□ -0.23
ACTB-203ENST00000417101 FCER1GP30273 86 aa13.62□□□□□ -0.23
ACTB-203ENST00000417101 SYCNQ0VAF6 134 aa13.62□□□□□ -0.23
ACTB-203ENST00000417101 RIGQ13278 110 aa13.61□□□□□ -0.23
ACTB-203ENST00000417101 NUP35Q8NFH5 326 aa13.61□□□□□ -0.23
ACTB-203ENST00000417101 V9GYV3 84 aa13.61□□□□□ -0.23
ACTB-203ENST00000417101 CAMPP49913 170 aa13.59□□□□□ -0.23
ACTB-203ENST00000417101 NRACQ8N912 160 aa13.59□□□□□ -0.23
ACTB-203ENST00000417101 LINC01600Q96MT4 127 aa13.59□□□□□ -0.23
ACTB-203ENST00000417101 C1orf196B1AJZ1 125 aa13.58□□□□□ -0.24
ACTB-203ENST00000417101 MALP21145 153 aa13.58□□□□□ -0.24
ACTB-203ENST00000417101 SUMO2P61956 95 aaKnown RBP13.58□□□□□ -0.24
ACTB-203ENST00000417101 RNASE13Q5GAN3 156 aaKnown RBP13.58□□□□□ -0.24
ACTB-203ENST00000417101 IGLV4-69A0A075B6H9 119 aa13.57□□□□□ -0.24
ACTB-203ENST00000417101 COX7A2LO14548 114 aa13.57□□□□□ -0.24
ACTB-203ENST00000417101 PPP1R17O96001 155 aa13.57□□□□□ -0.24
ACTB-203ENST00000417101 ISOC2Q96AB3 205 aa13.57□□□□□ -0.24
ACTB-203ENST00000417101 KIR2DL4Q99706 377 aa13.57□□□□□ -0.24
ACTB-203ENST00000417101 UBE2D4Q9Y2X8 147 aa13.57□□□□□ -0.24
ACTB-203ENST00000417101 LRP2P98164 4655 aa13.56□□□□□ -0.24
ACTB-203ENST00000417101 SMAGPQ0VAQ4 97 aa13.56□□□□□ -0.24
ACTB-203ENST00000417101 TMEM241Q24JQ0 296 aa13.56□□□□□ -0.24
ACTB-203ENST00000417101 CSDC2Q9Y534 153 aaKnown RBP13.56□□□□□ -0.24
ACTB-203ENST00000417101 TRAV13-1A0A0B4J241 112 aa13.55□□□□□ -0.24
ACTB-203ENST00000417101 PTTG1IPP53801 180 aa13.55□□□□□ -0.24
ACTB-203ENST00000417101 GAGE2BQ13066 116 aa13.55□□□□□ -0.24
ACTB-203ENST00000417101 NAT8BQ9UHF3 227 aa13.55□□□□□ -0.24
ACTB-203ENST00000417101 LOC107984640A0A0U1RRK4 108 aa13.54□□□□□ -0.24
ACTB-203ENST00000417101 RPL23P62829 140 aaKnown RBP13.54□□□□□ -0.24
ACTB-203ENST00000417101 MRPL51Q4U2R6 128 aaKnown RBP13.54□□□□□ -0.24
ACTB-203ENST00000417101 SPINK6Q6UWN8 80 aa13.54□□□□□ -0.24
ACTB-203ENST00000417101 PPP1R2P9O14990 202 aa13.53□□□□□ -0.24
ACTB-203ENST00000417101 ODF1Q14990 250 aa13.53□□□□□ -0.24
ACTB-203ENST00000417101 ADIRFQ15847 76 aa13.53□□□□□ -0.24
ACTB-203ENST00000417101 FAM74A3Q4VXF1 159 aa13.53□□□□□ -0.24
ACTB-203ENST00000417101 FAM104BQ5XKR9 115 aa13.53□□□□□ -0.24
ACTB-203ENST00000417101 Q6ZRP5 223 aa13.53□□□□□ -0.24
ACTB-203ENST00000417101 Q6ZUT4 128 aa13.53□□□□□ -0.24
ACTB-203ENST00000417101 C5orf38Q86SI9 138 aa13.52□□□□□ -0.25
ACTB-203ENST00000417101 CAMK2N2Q96S95 79 aa13.52□□□□□ -0.25
ACTB-203ENST00000417101 A0A0J9YXV3 536 aa13.51□□□□□ -0.25
ACTB-203ENST00000417101 REG3GQ6UW15 175 aa13.51□□□□□ -0.25
ACTB-203ENST00000417101 SRSF9Q13242 221 aaKnown RBP eCLIP13.5□□□□□ -0.25
ACTB-203ENST00000417101 TMEM18Q96B42 140 aa13.5□□□□□ -0.25
ACTB-203ENST00000417101 TIMM21Q9BVV7 248 aa13.5□□□□□ -0.25
ACTB-203ENST00000417101 A0A1W2PNN7 141 aa13.49□□□□□ -0.25
ACTB-203ENST00000417101 SMIM27A0A1W2PRY6 76 aa13.49□□□□□ -0.25
ACTB-203ENST00000417101 C9JQL5 133 aa13.49□□□□□ -0.25
ACTB-203ENST00000417101 APOMO95445 188 aa13.49□□□□□ -0.25
ACTB-203ENST00000417101 CKS2P33552 79 aa13.49□□□□□ -0.25
ACTB-203ENST00000417101 C2orf48Q96LS8 159 aa13.49□□□□□ -0.25
ACTB-203ENST00000417101 C20orf78Q9BR46 151 aa13.49□□□□□ -0.25
ACTB-203ENST00000417101 NAT8Q9UHE5 227 aa13.49□□□□□ -0.25
ACTB-203ENST00000417101 LINC00862A6NCI5 91 aa13.48□□□□□ -0.25
ACTB-203ENST00000417101 TRBV24-1A0A075B6N3 115 aa13.47□□□□□ -0.25
ACTB-203ENST00000417101 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.47□□□□□ -0.25
ACTB-203ENST00000417101 KRTAP10-8P60410 259 aa13.47□□□□□ -0.25
ACTB-203ENST00000417101 RPL39P62891 51 aaKnown RBP13.47□□□□□ -0.25
ACTB-203ENST00000417101 A0A1B0GW15 77 aa13.46□□□□□ -0.25
ACTB-203ENST00000417101 RPL18AQ02543 176 aaKnown RBP13.46□□□□□ -0.25
ACTB-203ENST00000417101 SPAG11BQ08648 103 aa13.46□□□□□ -0.25
ACTB-203ENST00000417101 TNFRSF6BO95407 300 aa13.45□□□□□ -0.26
ACTB-203ENST00000417101 RPL32P62910 135 aaKnown RBP13.45□□□□□ -0.26
ACTB-203ENST00000417101 C9orf116Q5BN46 136 aaPredicted RBP13.45□□□□□ -0.26
ACTB-203ENST00000417101 OPRPNQ99935 248 aaPredicted RBP13.45□□□□□ -0.26
ACTB-203ENST00000417101 TCAPO15273 167 aa13.44□□□□□ -0.26
ACTB-203ENST00000417101 SRSF3P84103 164 aaKnown RBP13.44□□□□□ -0.26
ACTB-203ENST00000417101 MRPL54Q6P161 138 aaKnown RBP13.44□□□□□ -0.26
ACTB-203ENST00000417101 SMIM2Q9BVW6 85 aa13.44□□□□□ -0.26
ACTB-203ENST00000417101 D6R8Y8 96 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms