RNA–Protein interactions for RNA: ENST00000415380.6

SCARB1-203, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2 BASIC

Gene SCARB1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-203ENST00000415380 KHDC1LQ5JSQ8 128 aa12.96□□□□□ -0.33
SCARB1-203ENST00000415380 C4orf3Q8WVX3 66 aa12.96□□□□□ -0.34
SCARB1-203ENST00000415380 DEFB114Q30KQ6 69 aa12.95□□□□□ -0.34
SCARB1-203ENST00000415380 Q8N2B8 174 aa12.95□□□□□ -0.34
SCARB1-203ENST00000415380 GAGE2BQ13066 116 aa12.94□□□□□ -0.34
SCARB1-203ENST00000415380 GAGE2EQ4V326 116 aa12.94□□□□□ -0.34
SCARB1-203ENST00000415380 XCL2Q9UBD3 114 aa12.94□□□□□ -0.34
SCARB1-203ENST00000415380 GAGE2DQ9UEU5 116 aa12.94□□□□□ -0.34
SCARB1-203ENST00000415380 LINC00242Q5T6M2 205 aa12.94□□□□□ -0.34
SCARB1-203ENST00000415380 CITED2Q99967 270 aaPredicted RBP12.94□□□□□ -0.34
SCARB1-203ENST00000415380 ANKRD17O75179 2603 aaKnown RBP12.93□□□□□ -0.34
SCARB1-203ENST00000415380 Q9H8V8 135 aa12.93□□□□□ -0.34
SCARB1-203ENST00000415380 FBN2P35556 2912 aa12.93□□□□□ -0.34
SCARB1-203ENST00000415380 IGLV5-39A0A0G2JS06 123 aa12.93□□□□□ -0.34
SCARB1-203ENST00000415380 LINC00694P0DN24 101 aa12.93□□□□□ -0.34
SCARB1-203ENST00000415380 CIRBPQ14011 172 aaKnown RBP12.93□□□□□ -0.34
SCARB1-203ENST00000415380 HERVK_113P63121 156 aa12.92□□□□□ -0.34
SCARB1-203ENST00000415380 LINC00308Q8TCZ7 52 aa12.92□□□□□ -0.34
SCARB1-203ENST00000415380 NDUFA7O95182 113 aa12.92□□□□□ -0.34
SCARB1-203ENST00000415380 ZNF625Q96I27 306 aaPredicted RBP12.92□□□□□ -0.34
SCARB1-203ENST00000415380 C15orf53Q8NAA6 179 aa12.91□□□□□ -0.34
SCARB1-203ENST00000415380 NHLRC4P0CG21 123 aaPredicted RBP12.91□□□□□ -0.34
SCARB1-203ENST00000415380 POLQO75417 2590 aa12.91□□□□□ -0.34
SCARB1-203ENST00000415380 A0A0U1RRA0 63 aa12.9□□□□□ -0.34
SCARB1-203ENST00000415380 IGSF10Q6WRI0 2623 aa12.9□□□□□ -0.34
SCARB1-203ENST00000415380 TRGV1A0A0A0MS02 117 aa12.9□□□□□ -0.34
SCARB1-203ENST00000415380 ODF3L2Q3SX64 289 aa12.9□□□□□ -0.34
SCARB1-203ENST00000415380 C1orf158Q8N1D5 194 aa12.9□□□□□ -0.34
SCARB1-203ENST00000415380 IL17DQ8TAD2 202 aa12.9□□□□□ -0.35
SCARB1-203ENST00000415380 SMIM1B2RUZ4 78 aa12.89□□□□□ -0.35
SCARB1-203ENST00000415380 NDUFV3P56181 108 aaKnown RBP12.89□□□□□ -0.35
SCARB1-203ENST00000415380 FAM19A3Q7Z5A8 133 aa12.89□□□□□ -0.35
SCARB1-203ENST00000415380 NTM-AS1Q6ZSK4 140 aa12.88□□□□□ -0.35
SCARB1-203ENST00000415380 TRAV13-1A0A0B4J241 112 aa12.88□□□□□ -0.35
SCARB1-203ENST00000415380 DEFB121Q5J5C9 76 aa12.88□□□□□ -0.35
SCARB1-203ENST00000415380 Q6Q795 121 aa12.88□□□□□ -0.35
SCARB1-203ENST00000415380 SOSTDC1Q6X4U4 206 aa12.88□□□□□ -0.35
SCARB1-203ENST00000415380 STHQ8IWL8 128 aa12.87□□□□□ -0.35
SCARB1-203ENST00000415380 CR1P17927 2039 aa12.87□□□□□ -0.35
SCARB1-203ENST00000415380 RPL36AP83881 106 aaKnown RBP12.87□□□□□ -0.35
SCARB1-203ENST00000415380 RPL36ALQ969Q0 106 aaKnown RBP12.87□□□□□ -0.35
SCARB1-203ENST00000415380 K7EQD1 137 aa12.86□□□□□ -0.35
SCARB1-203ENST00000415380 CSDC2Q9Y534 153 aaKnown RBP12.86□□□□□ -0.35
SCARB1-203ENST00000415380 TTC32Q5I0X7 151 aa12.86□□□□□ -0.35
SCARB1-203ENST00000415380 Q6ZTI0 123 aa12.85□□□□□ -0.35
SCARB1-203ENST00000415380 MYO18BQ8IUG5 2567 aa12.85□□□□□ -0.35
SCARB1-203ENST00000415380 GAGE5Q13069 117 aa12.84□□□□□ -0.35
SCARB1-203ENST00000415380 GAGE6Q13070 117 aa12.84□□□□□ -0.35
SCARB1-203ENST00000415380 PRIMA1Q86XR5 153 aa12.84□□□□□ -0.35
SCARB1-203ENST00000415380 TRBV10-1A0A0K0K1A3 114 aa12.84□□□□□ -0.35
SCARB1-203ENST00000415380 FAM240AA0A1B0GVK7 77 aa12.84□□□□□ -0.35
SCARB1-203ENST00000415380 COX7A2LO14548 114 aa12.84□□□□□ -0.35
SCARB1-203ENST00000415380 DAZ2Q13117 558 aaKnown RBP12.84□□□□□ -0.35
SCARB1-203ENST00000415380 MEIG1Q5JSS6 88 aa12.84□□□□□ -0.35
SCARB1-203ENST00000415380 DAZ4Q86SG3 579 aaKnown RBP12.84□□□□□ -0.35
SCARB1-203ENST00000415380 DAZ3Q9NR90 486 aaKnown RBP12.84□□□□□ -0.35
SCARB1-203ENST00000415380 CDC42SE2Q9NRR3 84 aa12.84□□□□□ -0.35
SCARB1-203ENST00000415380 F5H768 121 aa12.83□□□□□ -0.35
SCARB1-203ENST00000415380 GAGE12JA6NER3 117 aa12.83□□□□□ -0.36
SCARB1-203ENST00000415380 KRTAP10-9P60411 292 aa12.83□□□□□ -0.36
SCARB1-203ENST00000415380 GAGE4Q13068 117 aa12.83□□□□□ -0.36
SCARB1-203ENST00000415380 CACNA1AO00555 2505 aa12.83□□□□□ -0.36
SCARB1-203ENST00000415380 MRPL23Q16540 153 aaKnown RBP12.82□□□□□ -0.36
SCARB1-203ENST00000415380 SHISA2Q6UWI4 295 aa12.82□□□□□ -0.36
SCARB1-203ENST00000415380 COPS9Q8WXC6 57 aa12.82□□□□□ -0.36
SCARB1-203ENST00000415380 TRAV25A0A0B4J276 109 aa12.81□□□□□ -0.36
SCARB1-203ENST00000415380 TEX15Q9BXT5 2789 aa12.81□□□□□ -0.36
SCARB1-203ENST00000415380 CENPEQ02224 2701 aa12.8□□□□□ -0.36
SCARB1-203ENST00000415380 AKAP9Q99996 3911 aa12.8□□□□□ -0.36
SCARB1-203ENST00000415380 MYO9AB2RTY4 2548 aa12.8□□□□□ -0.36
SCARB1-203ENST00000415380 B5MCH6 92 aa12.8□□□□□ -0.36
SCARB1-203ENST00000415380 C11orf44Q8N8P7 122 aa12.8□□□□□ -0.36
SCARB1-203ENST00000415380 Q96MF0 132 aa12.8□□□□□ -0.36
SCARB1-203ENST00000415380 A0A1W2PRX2 142 aa12.79□□□□□ -0.36
SCARB1-203ENST00000415380 HERV-K104P63124 156 aa12.79□□□□□ -0.36
SCARB1-203ENST00000415380 NOP10Q9NPE3 64 aaKnown RBP12.79□□□□□ -0.36
SCARB1-203ENST00000415380 SS18L2Q9UHA2 77 aa12.79□□□□□ -0.36
SCARB1-203ENST00000415380 ACACBO00763 2458 aa12.79□□□□□ -0.36
SCARB1-203ENST00000415380 CCDC179H3BU77 68 aa12.78□□□□□ -0.36
SCARB1-203ENST00000415380 CHD6Q8TD26 2715 aa12.77□□□□□ -0.36
SCARB1-203ENST00000415380 DEFB113Q30KQ7 82 aa12.77□□□□□ -0.36
SCARB1-203ENST00000415380 UBE2L6O14933 153 aa12.77□□□□□ -0.37
SCARB1-203ENST00000415380 PRB1P04280 392 aa12.77□□□□□ -0.37
SCARB1-203ENST00000415380 GAGE7O76087 117 aa12.76□□□□□ -0.37
SCARB1-203ENST00000415380 GAGE12FP0CL80 117 aa12.76□□□□□ -0.37
SCARB1-203ENST00000415380 GAGE12GP0CL81 117 aa12.76□□□□□ -0.37
SCARB1-203ENST00000415380 GAGE12IP0CL82 117 aa12.76□□□□□ -0.37
SCARB1-203ENST00000415380 TMEM243Q9BU79 118 aa12.76□□□□□ -0.37
SCARB1-203ENST00000415380 FAM208BQ5VWN6 2430 aa12.75□□□□□ -0.37
SCARB1-203ENST00000415380 CCL24O00175 119 aa12.75□□□□□ -0.37
SCARB1-203ENST00000415380 TRACP01848 142 aa12.75□□□□□ -0.37
SCARB1-203ENST00000415380 LOC100131303A0A0U1RQF7 123 aa12.74□□□□□ -0.37
SCARB1-203ENST00000415380 FAM218AQ96MZ4 157 aa12.74□□□□□ -0.37
SCARB1-203ENST00000415380 GIG44P09565 113 aaPredicted RBP12.74□□□□□ -0.37
SCARB1-203ENST00000415380 TRBV7-7A0A0K0K1E9 115 aa12.73□□□□□ -0.37
SCARB1-203ENST00000415380 PPDPFQ9H3Y8 114 aa12.73□□□□□ -0.37
SCARB1-203ENST00000415380 PTPN13Q12923 2485 aa12.73□□□□□ -0.37
SCARB1-203ENST00000415380 PLAC8L1A1L4L8 177 aa12.73□□□□□ -0.37
SCARB1-203ENST00000415380 ACYP1P07311 99 aa12.72□□□□□ -0.37
SCARB1-203ENST00000415380 BAALC-AS2P0C853 105 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms