RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 WFDC2Q14508 124 aa9.69□□□□□ -0.86
CHD1-202ENST00000414220 COX19Q49B96 90 aa9.69□□□□□ -0.86
CHD1-202ENST00000414220 C10orf91Q5T1B1 145 aa9.69□□□□□ -0.86
CHD1-202ENST00000414220 MAP1LC3AQ9H492 121 aa9.69□□□□□ -0.86
CHD1-202ENST00000414220 RPS10P5Q9NQ39 176 aa9.69□□□□□ -0.86
CHD1-202ENST00000414220 PKHD1P08F94 4074 aa9.68□□□□□ -0.86
CHD1-202ENST00000414220 USP17L23D6RBM5 183 aa9.68□□□□□ -0.86
CHD1-202ENST00000414220 SS18Q15532 418 aa9.68□□□□□ -0.86
CHD1-202ENST00000414220 ZNF664Q8N3J9 261 aa9.68□□□□□ -0.86
CHD1-202ENST00000414220 CSDC2Q9Y534 153 aaKnown RBP9.68□□□□□ -0.86
CHD1-202ENST00000414220 CCL25O15444 150 aa9.67□□□□□ -0.86
CHD1-202ENST00000414220 CDC42SE2Q9NRR3 84 aa9.67□□□□□ -0.86
CHD1-202ENST00000414220 AP5S1Q9NUS5 200 aa9.67□□□□□ -0.86
CHD1-202ENST00000414220 GAGE12HA6NDE8 117 aa9.66□□□□□ -0.86
CHD1-202ENST00000414220 SNAPINO95295 136 aa9.66□□□□□ -0.86
CHD1-202ENST00000414220 APOC3P02656 99 aa9.66□□□□□ -0.86
CHD1-202ENST00000414220 KRTAP10-1P60331 282 aa9.66□□□□□ -0.86
CHD1-202ENST00000414220 SVBPQ8N300 66 aa9.66□□□□□ -0.86
CHD1-202ENST00000414220 CHCHD10Q8WYQ3 142 aaPredicted RBP9.66□□□□□ -0.86
CHD1-202ENST00000414220 TIMM21Q9BVV7 248 aa9.66□□□□□ -0.86
CHD1-202ENST00000414220 LOC389332A0A1B0GUA5 103 aa9.65□□□□□ -0.86
CHD1-202ENST00000414220 PRSS47A8MTI9 375 aa9.65□□□□□ -0.86
CHD1-202ENST00000414220 KRTAP26-1Q6PEX3 210 aa9.65□□□□□ -0.86
CHD1-202ENST00000414220 UBE2D4Q9Y2X8 147 aa9.65□□□□□ -0.86
CHD1-202ENST00000414220 LINC00959A0A1B0GUT2 108 aa9.64□□□□□ -0.87
CHD1-202ENST00000414220 K7EMI3 77 aa9.64□□□□□ -0.87
CHD1-202ENST00000414220 G0S2P27469 103 aa9.64□□□□□ -0.87
CHD1-202ENST00000414220 GNB1LQ9BYB4 327 aa9.64□□□□□ -0.87
CHD1-202ENST00000414220 SPANXA1Q9NS26 97 aa9.64□□□□□ -0.87
CHD1-202ENST00000414220 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.63□□□□□ -0.87
CHD1-202ENST00000414220 hDV102S1A0JD36 115 aa9.63□□□□□ -0.87
CHD1-202ENST00000414220 C1orf196B1AJZ1 125 aa9.63□□□□□ -0.87
CHD1-202ENST00000414220 MT-ND6P03923 174 aa9.63□□□□□ -0.87
CHD1-202ENST00000414220 IFI27P40305 119 aaPredicted RBP9.63□□□□□ -0.87
CHD1-202ENST00000414220 ORMDL2Q53FV1 153 aa9.63□□□□□ -0.87
CHD1-202ENST00000414220 Q8N8P6 123 aa9.63□□□□□ -0.87
CHD1-202ENST00000414220 NXT2Q9NPJ8 142 aaKnown RBP9.63□□□□□ -0.87
CHD1-202ENST00000414220 PRSS1P07477 247 aa9.62□□□□□ -0.87
CHD1-202ENST00000414220 XCL1P47992 114 aa9.62□□□□□ -0.87
CHD1-202ENST00000414220 CD164L2Q6UWJ8 174 aa9.61□□□□□ -0.87
CHD1-202ENST00000414220 KIAA1109Q2LD37 5005 aa9.61□□□□□ -0.87
CHD1-202ENST00000414220 RPL39P62891 51 aaKnown RBP9.6□□□□□ -0.87
CHD1-202ENST00000414220 TRAV13-1A0A0B4J241 112 aa9.59□□□□□ -0.87
CHD1-202ENST00000414220 MALP21145 153 aa9.59□□□□□ -0.87
CHD1-202ENST00000414220 MRPS36P82909 103 aaKnown RBP9.59□□□□□ -0.87
CHD1-202ENST00000414220 FABP9Q0Z7S8 132 aa9.59□□□□□ -0.87
CHD1-202ENST00000414220 PRSS3P2Q8NHM4 247 aa9.59□□□□□ -0.87
CHD1-202ENST00000414220 CYSLTR1Q9Y271 337 aa9.59□□□□□ -0.87
CHD1-202ENST00000414220 LRP1BQ9NZR2 4599 aa9.59□□□□□ -0.87
CHD1-202ENST00000414220 IGHV1-58A0A0C4DH39 117 aa9.58□□□□□ -0.88
CHD1-202ENST00000414220 XGP55808 180 aa9.58□□□□□ -0.88
CHD1-202ENST00000414220 CNBPP62633 177 aaKnown RBP9.58□□□□□ -0.88
CHD1-202ENST00000414220 FOXI1Q12951 378 aa9.58□□□□□ -0.88
CHD1-202ENST00000414220 KIAA1644Q3SXP7 199 aa9.58□□□□□ -0.88
CHD1-202ENST00000414220 Q6ZUT4 128 aa9.58□□□□□ -0.88
CHD1-202ENST00000414220 Q8N1X5 172 aa9.58□□□□□ -0.88
CHD1-202ENST00000414220 C9orf163Q8N9P6 203 aa9.58□□□□□ -0.88
CHD1-202ENST00000414220 PYGO1Q9Y3Y4 419 aa9.58□□□□□ -0.88
CHD1-202ENST00000414220 APOMO95445 188 aa9.57□□□□□ -0.88
CHD1-202ENST00000414220 RNASE13Q5GAN3 156 aaKnown RBP9.57□□□□□ -0.88
CHD1-202ENST00000414220 Q6ZN92 141 aa9.57□□□□□ -0.88
CHD1-202ENST00000414220 MRPL18Q9H0U6 180 aaKnown RBP9.57□□□□□ -0.88
CHD1-202ENST00000414220 LINC01549A6NIU2 74 aa9.56□□□□□ -0.88
CHD1-202ENST00000414220 IFITM10A6NMD0 228 aa9.56□□□□□ -0.88
CHD1-202ENST00000414220 ZNF561-AS1K7EIQ3 104 aa9.56□□□□□ -0.88
CHD1-202ENST00000414220 COX7A2LO14548 114 aa9.56□□□□□ -0.88
CHD1-202ENST00000414220 LINC01620Q4KN68 170 aa9.56□□□□□ -0.88
CHD1-202ENST00000414220 PAPPA-AS1Q5QFB9 102 aa9.56□□□□□ -0.88
CHD1-202ENST00000414220 C2orf66Q6UXQ4 117 aa9.56□□□□□ -0.88
CHD1-202ENST00000414220 C2orf88Q9BSF0 95 aa9.56□□□□□ -0.88
CHD1-202ENST00000414220 PKIGQ9Y2B9 76 aa9.56□□□□□ -0.88
CHD1-202ENST00000414220 HERC2O95714 4834 aa9.56□□□□□ -0.88
CHD1-202ENST00000414220 IGHV3-64A0A075B6Q5 118 aa9.55□□□□□ -0.88
CHD1-202ENST00000414220 GVQW2A0A096LPI5 108 aaPredicted RBP9.55□□□□□ -0.88
CHD1-202ENST00000414220 FAM229AH3BQW9 127 aa9.55□□□□□ -0.88
CHD1-202ENST00000414220 NPSP0C0P6 89 aa9.55□□□□□ -0.88
CHD1-202ENST00000414220 HIGD2BQ4VC39 106 aa9.55□□□□□ -0.88
CHD1-202ENST00000414220 TEX43Q6ZNM6 134 aa9.55□□□□□ -0.88
CHD1-202ENST00000414220 C15orf56Q8N910 161 aa9.55□□□□□ -0.88
CHD1-202ENST00000414220 TMEM141Q96I45 108 aa9.55□□□□□ -0.88
CHD1-202ENST00000414220 SMCO4Q9NRQ5 59 aa9.55□□□□□ -0.88
CHD1-202ENST00000414220 TRAPPC1Q9Y5R8 145 aa9.55□□□□□ -0.88
CHD1-202ENST00000414220 DNAH5Q8TE73 4624 aa9.54□□□□□ -0.88
CHD1-202ENST00000414220 EPM2AB3EWF7 344 aa9.54□□□□□ -0.88
CHD1-202ENST00000414220 ALKBH7Q9BT30 221 aaPredicted RBP9.54□□□□□ -0.88
CHD1-202ENST00000414220 VCX2Q9H322 139 aa9.54□□□□□ -0.88
CHD1-202ENST00000414220 FAM30AQ9NZY2 134 aa9.54□□□□□ -0.88
CHD1-202ENST00000414220 TGIF2-C20orf24A0A0A6YYL0 155 aa9.53□□□□□ -0.88
CHD1-202ENST00000414220 Q6ZSA8 131 aa9.53□□□□□ -0.88
CHD1-202ENST00000414220 FA2HQ7L5A8 372 aa9.53□□□□□ -0.88
CHD1-202ENST00000414220 DPH3Q96FX2 82 aa9.53□□□□□ -0.88
CHD1-202ENST00000414220 OPRPNQ99935 248 aaPredicted RBP9.53□□□□□ -0.88
CHD1-202ENST00000414220 RYR1P21817 5038 aa9.52□□□□□ -0.89
CHD1-202ENST00000414220 IGLV4-3A0A075B6K6 122 aa9.52□□□□□ -0.89
CHD1-202ENST00000414220 CHAC1Q9BUX1 264 aa9.52□□□□□ -0.89
CHD1-202ENST00000414220 C5orf38Q86SI9 138 aa9.51□□□□□ -0.89
CHD1-202ENST00000414220 SMR3BP02814 79 aaPredicted RBP9.5□□□□□ -0.89
CHD1-202ENST00000414220 TOMM6Q96B49 74 aa9.5□□□□□ -0.89
CHD1-202ENST00000414220 TIMM17AQ99595 171 aa9.5□□□□□ -0.89
CHD1-202ENST00000414220 RAB5BP61020 215 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms