RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 EPM2AB3EWF7 344 aa12.27□□□□□ -0.45
TRIM56-202ENST00000412507 VCYO14598 125 aa12.27□□□□□ -0.45
TRIM56-202ENST00000412507 S100A8P05109 93 aa12.27□□□□□ -0.45
TRIM56-202ENST00000412507 CKS2P33552 79 aa12.27□□□□□ -0.45
TRIM56-202ENST00000412507 VPS13BQ7Z7G8 4022 aa12.26□□□□□ -0.45
TRIM56-202ENST00000412507 S100PP25815 95 aa12.26□□□□□ -0.45
TRIM56-202ENST00000412507 Q6ZSA8 131 aa12.26□□□□□ -0.45
TRIM56-202ENST00000412507 ZNF25P17030 456 aaPredicted RBP12.25□□□□□ -0.45
TRIM56-202ENST00000412507 FCER1GP30273 86 aa12.25□□□□□ -0.45
TRIM56-202ENST00000412507 TMEM101Q96IK0 257 aa12.25□□□□□ -0.45
TRIM56-202ENST00000412507 BTF3L4Q96K17 158 aa12.25□□□□□ -0.45
TRIM56-202ENST00000412507 GAGE12HA6NDE8 117 aa12.24□□□□□ -0.45
TRIM56-202ENST00000412507 D6R8Y8 96 aa12.24□□□□□ -0.45
TRIM56-202ENST00000412507 Q5VSD8 79 aa12.24□□□□□ -0.45
TRIM56-202ENST00000412507 TNFRSF6BO95407 300 aa12.23□□□□□ -0.45
TRIM56-202ENST00000412507 ATP5L2Q7Z4Y8 100 aa12.23□□□□□ -0.45
TRIM56-202ENST00000412507 OR5A1Q8NGJ0 315 aa12.23□□□□□ -0.45
TRIM56-202ENST00000412507 KIR2DL4Q99706 377 aa12.23□□□□□ -0.45
TRIM56-202ENST00000412507 SMCO4Q9NRQ5 59 aa12.23□□□□□ -0.45
TRIM56-202ENST00000412507 TRBV24-1A0A075B6N3 115 aa12.22□□□□□ -0.45
TRIM56-202ENST00000412507 TRAV9-1A0A075B6T8 112 aa12.22□□□□□ -0.45
TRIM56-202ENST00000412507 MRPL52Q86TS9 123 aaKnown RBP12.22□□□□□ -0.45
TRIM56-202ENST00000412507 CHCHD10Q8WYQ3 142 aaPredicted RBP12.22□□□□□ -0.45
TRIM56-202ENST00000412507 C20orf78Q9BR46 151 aa12.22□□□□□ -0.45
TRIM56-202ENST00000412507 hDV102S1A0JD36 115 aa12.21□□□□□ -0.45
TRIM56-202ENST00000412507 DGAT2L7PQ6IED9 249 aa12.21□□□□□ -0.45
TRIM56-202ENST00000412507 NPYP01303 97 aa12.2□□□□□ -0.46
TRIM56-202ENST00000412507 CDC42SE2Q9NRR3 84 aa12.2□□□□□ -0.46
TRIM56-202ENST00000412507 SRRM2Q9UQ35 2752 aaKnown RBP12.2□□□□□ -0.46
TRIM56-202ENST00000412507 RPL32P62910 135 aaKnown RBP12.19□□□□□ -0.46
TRIM56-202ENST00000412507 C9orf163Q8N9P6 203 aa12.19□□□□□ -0.46
TRIM56-202ENST00000412507 SMIM2Q9BVW6 85 aa12.19□□□□□ -0.46
TRIM56-202ENST00000412507 LINC00959A0A1B0GUT2 108 aa12.18□□□□□ -0.46
TRIM56-202ENST00000412507 FAM229AH3BQW9 127 aa12.18□□□□□ -0.46
TRIM56-202ENST00000412507 PPBPP02775 128 aa12.18□□□□□ -0.46
TRIM56-202ENST00000412507 SCXQ7RTU7 201 aa12.18□□□□□ -0.46
TRIM56-202ENST00000412507 ZNF664Q8N3J9 261 aa12.18□□□□□ -0.46
TRIM56-202ENST00000412507 C15orf56Q8N910 161 aa12.18□□□□□ -0.46
TRIM56-202ENST00000412507 PHOX2AO14813 284 aa12.17□□□□□ -0.46
TRIM56-202ENST00000412507 TMEM136Q6ZRR5 245 aa12.17□□□□□ -0.46
TRIM56-202ENST00000412507 ORMDL3Q8N138 153 aa12.17□□□□□ -0.46
TRIM56-202ENST00000412507 UBE2D4Q9Y2X8 147 aa12.17□□□□□ -0.46
TRIM56-202ENST00000412507 CCL25O15444 150 aa12.16□□□□□ -0.46
TRIM56-202ENST00000412507 XCL1P47992 114 aa12.16□□□□□ -0.46
TRIM56-202ENST00000412507 FOXI1Q12951 378 aa12.16□□□□□ -0.46
TRIM56-202ENST00000412507 CFAP161Q6P656 301 aa12.16□□□□□ -0.46
TRIM56-202ENST00000412507 CBLN2Q8IUK8 224 aa12.16□□□□□ -0.46
TRIM56-202ENST00000412507 PRELID3AQ96N28 172 aa12.16□□□□□ -0.46
TRIM56-202ENST00000412507 CHAC1Q9BUX1 264 aa12.16□□□□□ -0.46
TRIM56-202ENST00000412507 AP5S1Q9NUS5 200 aa12.16□□□□□ -0.46
TRIM56-202ENST00000412507 SLPIP03973 132 aa12.15□□□□□ -0.46
TRIM56-202ENST00000412507 CNBPP62633 177 aaKnown RBP12.15□□□□□ -0.46
TRIM56-202ENST00000412507 SMAGPQ0VAQ4 97 aa12.15□□□□□ -0.46
TRIM56-202ENST00000412507 SS18Q15532 418 aa12.15□□□□□ -0.46
TRIM56-202ENST00000412507 RNASE13Q5GAN3 156 aaKnown RBP12.15□□□□□ -0.46
TRIM56-202ENST00000412507 TMEM18Q96B42 140 aa12.15□□□□□ -0.46
TRIM56-202ENST00000412507 CSDC2Q9Y534 153 aaKnown RBP12.15□□□□□ -0.46
TRIM56-202ENST00000412507 TCAPO15273 167 aa12.14□□□□□ -0.47
TRIM56-202ENST00000412507 RPL39P62891 51 aaKnown RBP12.14□□□□□ -0.47
TRIM56-202ENST00000412507 COX19Q49B96 90 aa12.14□□□□□ -0.47
TRIM56-202ENST00000412507 HIGD2BQ4VC39 106 aa12.14□□□□□ -0.47
TRIM56-202ENST00000412507 CIRBP-AS1Q8TBR5 109 aa12.14□□□□□ -0.47
TRIM56-202ENST00000412507 INAFM2P0DMQ5 153 aa12.13□□□□□ -0.47
TRIM56-202ENST00000412507 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.12□□□□□ -0.47
TRIM56-202ENST00000412507 SCO1O75880 301 aa12.12□□□□□ -0.47
TRIM56-202ENST00000412507 SDIM1Q6ZPB5 146 aa12.12□□□□□ -0.47
TRIM56-202ENST00000412507 Q6ZUT4 128 aa12.12□□□□□ -0.47
TRIM56-202ENST00000412507 LINC00528Q8N1L1 170 aa12.12□□□□□ -0.47
TRIM56-202ENST00000412507 TIMM21Q9BVV7 248 aa12.12□□□□□ -0.47
TRIM56-202ENST00000412507 GVQW2A0A096LPI5 108 aaPredicted RBP12.1□□□□□ -0.47
TRIM56-202ENST00000412507 TGIF2-C20orf24A0A0A6YYL0 155 aa12.1□□□□□ -0.47
TRIM56-202ENST00000412507 LOC389332A0A1B0GUA5 103 aa12.1□□□□□ -0.47
TRIM56-202ENST00000412507 CD164L2Q6UWJ8 174 aa12.1□□□□□ -0.47
TRIM56-202ENST00000412507 YPEL4Q96NS1 127 aa12.1□□□□□ -0.47
TRIM56-202ENST00000412507 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.1□□□□□ -0.47
TRIM56-202ENST00000412507 FLG2Q5D862 2391 aaPredicted RBP12.1□□□□□ -0.47
TRIM56-202ENST00000412507 IGHV3-64A0A075B6Q5 118 aa12.09□□□□□ -0.47
TRIM56-202ENST00000412507 TRAV13-1A0A0B4J241 112 aa12.09□□□□□ -0.47
TRIM56-202ENST00000412507 C1orf196B1AJZ1 125 aa12.09□□□□□ -0.47
TRIM56-202ENST00000412507 PANO1I0J062 215 aa12.09□□□□□ -0.47
TRIM56-202ENST00000412507 RAB5AP20339 215 aa12.09□□□□□ -0.47
TRIM56-202ENST00000412507 LAMTOR2Q9Y2Q5 125 aa12.09□□□□□ -0.47
TRIM56-202ENST00000412507 IGHV1-58A0A0C4DH39 117 aa12.08□□□□□ -0.48
TRIM56-202ENST00000412507 PRSS47A8MTI9 375 aa12.08□□□□□ -0.48
TRIM56-202ENST00000412507 MT-ND6P03923 174 aa12.08□□□□□ -0.48
TRIM56-202ENST00000412507 FAM104AQ969W3 186 aa12.08□□□□□ -0.48
TRIM56-202ENST00000412507 OPRPNQ99935 248 aaPredicted RBP12.08□□□□□ -0.48
TRIM56-202ENST00000412507 MAP1LC3AQ9H492 121 aa12.08□□□□□ -0.48
TRIM56-202ENST00000412507 GNB1LQ9BYB4 327 aa12.07□□□□□ -0.48
TRIM56-202ENST00000412507 SPANXA1Q9NS26 97 aa12.07□□□□□ -0.48
TRIM56-202ENST00000412507 PLA2G1BP04054 148 aaKnown RBP12.06□□□□□ -0.48
TRIM56-202ENST00000412507 LINC00526Q96FQ7 95 aa12.06□□□□□ -0.48
TRIM56-202ENST00000412507 COLCA2A8K830 154 aa12.05□□□□□ -0.48
TRIM56-202ENST00000412507 Q8N8P6 123 aa12.05□□□□□ -0.48
TRIM56-202ENST00000412507 CHTF8P0CG12 524 aa12.04□□□□□ -0.48
TRIM56-202ENST00000412507 MRPS36P82909 103 aaKnown RBP12.04□□□□□ -0.48
TRIM56-202ENST00000412507 KIAA1644Q3SXP7 199 aa12.04□□□□□ -0.48
TRIM56-202ENST00000412507 COX7A2LO14548 114 aa12.03□□□□□ -0.48
TRIM56-202ENST00000412507 MALP21145 153 aa12.03□□□□□ -0.48
TRIM56-202ENST00000412507 COX6A2Q02221 97 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms