RNA–Protein interactions for RNA: ENST00000412328.5

HSPG2-204, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-204ENST00000412328 CHAC1Q9BUX1 264 aa11.2□□□□□ -0.62
HSPG2-204ENST00000412328 FLG2Q5D862 2391 aaPredicted RBP11.19□□□□□ -0.62
HSPG2-204ENST00000412328 D6R8Y8 96 aa11.19□□□□□ -0.62
HSPG2-204ENST00000412328 VCYO14598 125 aa11.19□□□□□ -0.62
HSPG2-204ENST00000412328 PPP1R2P9O14990 202 aa11.19□□□□□ -0.62
HSPG2-204ENST00000412328 NPYP01303 97 aa11.19□□□□□ -0.62
HSPG2-204ENST00000412328 FOXI1Q12951 378 aa11.19□□□□□ -0.62
HSPG2-204ENST00000412328 C20orf78Q9BR46 151 aa11.19□□□□□ -0.62
HSPG2-204ENST00000412328 CDC42SE2Q9NRR3 84 aa11.19□□□□□ -0.62
HSPG2-204ENST00000412328 UBE2D4Q9Y2X8 147 aa11.19□□□□□ -0.62
HSPG2-204ENST00000412328 IGKV3OR2-268A0A0C4DH90 116 aa11.18□□□□□ -0.62
HSPG2-204ENST00000412328 PANO1I0J062 215 aa11.18□□□□□ -0.62
HSPG2-204ENST00000412328 TNFRSF6BO95407 300 aa11.18□□□□□ -0.62
HSPG2-204ENST00000412328 CIRBP-AS1Q8TBR5 109 aa11.18□□□□□ -0.62
HSPG2-204ENST00000412328 FAM104AQ969W3 186 aa11.18□□□□□ -0.62
HSPG2-204ENST00000412328 LINC00959A0A1B0GUT2 108 aa11.17□□□□□ -0.62
HSPG2-204ENST00000412328 S100A8P05109 93 aa11.17□□□□□ -0.62
HSPG2-204ENST00000412328 LINC00528Q8N1L1 170 aa11.17□□□□□ -0.62
HSPG2-204ENST00000412328 ANAPC16Q96DE5 110 aa11.17□□□□□ -0.62
HSPG2-204ENST00000412328 SMIM2Q9BVW6 85 aa11.17□□□□□ -0.62
HSPG2-204ENST00000412328 CSDC2Q9Y534 153 aaKnown RBP11.17□□□□□ -0.62
HSPG2-204ENST00000412328 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.17□□□□□ -0.62
HSPG2-204ENST00000412328 HERC1Q15751 4861 aa11.16□□□□□ -0.62
HSPG2-204ENST00000412328 hDV102S1A0JD36 115 aa11.16□□□□□ -0.62
HSPG2-204ENST00000412328 CKS2P33552 79 aa11.16□□□□□ -0.62
HSPG2-204ENST00000412328 CIRBPQ14011 172 aaKnown RBP11.16□□□□□ -0.62
HSPG2-204ENST00000412328 SDIM1Q6ZPB5 146 aa11.16□□□□□ -0.62
HSPG2-204ENST00000412328 GVQW2A0A096LPI5 108 aaPredicted RBP11.15□□□□□ -0.62
HSPG2-204ENST00000412328 F8W036 122 aa11.15□□□□□ -0.62
HSPG2-204ENST00000412328 PHOX2AO14813 284 aa11.15□□□□□ -0.62
HSPG2-204ENST00000412328 UQCC3Q6UW78 93 aa11.15□□□□□ -0.62
HSPG2-204ENST00000412328 BTF3L4Q96K17 158 aa11.15□□□□□ -0.62
HSPG2-204ENST00000412328 KIR2DL4Q99706 377 aa11.15□□□□□ -0.62
HSPG2-204ENST00000412328 INAFM2P0DMQ5 153 aa11.14□□□□□ -0.63
HSPG2-204ENST00000412328 FCER1GP30273 86 aa11.14□□□□□ -0.63
HSPG2-204ENST00000412328 ZNF664Q8N3J9 261 aa11.14□□□□□ -0.63
HSPG2-204ENST00000412328 TMEM101Q96IK0 257 aa11.14□□□□□ -0.63
HSPG2-204ENST00000412328 FAM229AH3BQW9 127 aa11.13□□□□□ -0.63
HSPG2-204ENST00000412328 CCL25O15444 150 aa11.13□□□□□ -0.63
HSPG2-204ENST00000412328 PPBPP02775 128 aa11.13□□□□□ -0.63
HSPG2-204ENST00000412328 MT-ND4LP03901 98 aa11.13□□□□□ -0.63
HSPG2-204ENST00000412328 Q6ZUT4 128 aa11.13□□□□□ -0.63
HSPG2-204ENST00000412328 TIMM21Q9BVV7 248 aa11.13□□□□□ -0.63
HSPG2-204ENST00000412328 TMEM218A2RU14 115 aa11.12□□□□□ -0.63
HSPG2-204ENST00000412328 XCL1P47992 114 aa11.12□□□□□ -0.63
HSPG2-204ENST00000412328 RPL39P62891 51 aaKnown RBP11.12□□□□□ -0.63
HSPG2-204ENST00000412328 ORMDL3Q8N138 153 aa11.12□□□□□ -0.63
HSPG2-204ENST00000412328 PRSS47A8MTI9 375 aa11.11□□□□□ -0.63
HSPG2-204ENST00000412328 HIGD2BQ4VC39 106 aa11.11□□□□□ -0.63
HSPG2-204ENST00000412328 RNASE13Q5GAN3 156 aaKnown RBP11.11□□□□□ -0.63
HSPG2-204ENST00000412328 FAT3Q8TDW7 4589 aa11.1□□□□□ -0.63
HSPG2-204ENST00000412328 DMBT1Q9UGM3 2413 aaPredicted RBP11.09□□□□□ -0.63
HSPG2-204ENST00000412328 TCAPO15273 167 aa11.09□□□□□ -0.63
HSPG2-204ENST00000412328 CD164L2Q6UWJ8 174 aa11.09□□□□□ -0.63
HSPG2-204ENST00000412328 PRELID3AQ96N28 172 aa11.09□□□□□ -0.63
HSPG2-204ENST00000412328 LRP1Q07954 4544 aaKnown RBP11.08□□□□□ -0.64
HSPG2-204ENST00000412328 IGHV3-64A0A075B6Q5 118 aa11.08□□□□□ -0.64
HSPG2-204ENST00000412328 CFAP161Q6P656 301 aa11.08□□□□□ -0.64
HSPG2-204ENST00000412328 TMEM136Q6ZRR5 245 aa11.08□□□□□ -0.64
HSPG2-204ENST00000412328 SPACA4Q8TDM5 124 aa11.08□□□□□ -0.64
HSPG2-204ENST00000412328 IMMP2LQ96T52 175 aa11.08□□□□□ -0.64
HSPG2-204ENST00000412328 LAMTOR2Q9Y2Q5 125 aa11.08□□□□□ -0.64
HSPG2-204ENST00000412328 CHTF8P0CG12 524 aa11.07□□□□□ -0.64
HSPG2-204ENST00000412328 SS18Q15532 418 aa11.07□□□□□ -0.64
HSPG2-204ENST00000412328 C10orf91Q5T1B1 145 aa11.07□□□□□ -0.64
HSPG2-204ENST00000412328 COMMD7Q86VX2 200 aa11.07□□□□□ -0.64
HSPG2-204ENST00000412328 SEC11CQ9BY50 192 aa11.07□□□□□ -0.64
HSPG2-204ENST00000412328 AP5S1Q9NUS5 200 aa11.07□□□□□ -0.64
HSPG2-204ENST00000412328 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.06□□□□□ -0.64
HSPG2-204ENST00000412328 IGHV1-58A0A0C4DH39 117 aa11.06□□□□□ -0.64
HSPG2-204ENST00000412328 PLA2G1BP04054 148 aaKnown RBP11.06□□□□□ -0.64
HSPG2-204ENST00000412328 OPRPNQ99935 248 aaPredicted RBP11.06□□□□□ -0.64
HSPG2-204ENST00000412328 SPANXA1Q9NS26 97 aa11.06□□□□□ -0.64
HSPG2-204ENST00000412328 C1orf196B1AJZ1 125 aa11.05□□□□□ -0.64
HSPG2-204ENST00000412328 MRPS36P82909 103 aaKnown RBP11.05□□□□□ -0.64
HSPG2-204ENST00000412328 SMAGPQ0VAQ4 97 aa11.05□□□□□ -0.64
HSPG2-204ENST00000412328 TMEM18Q96B42 140 aa11.05□□□□□ -0.64
HSPG2-204ENST00000412328 LINC00526Q96FQ7 95 aa11.04□□□□□ -0.64
HSPG2-204ENST00000412328 CTDSP1Q9GZU7 261 aa11.04□□□□□ -0.64
HSPG2-204ENST00000412328 TRAV9-1A0A075B6T8 112 aa11.03□□□□□ -0.64
HSPG2-204ENST00000412328 CARHSP1Q9Y2V2 147 aaKnown RBP11.03□□□□□ -0.64
HSPG2-204ENST00000412328 TRAV13-1A0A0B4J241 112 aa11.02□□□□□ -0.65
HSPG2-204ENST00000412328 COX6A2Q02221 97 aa11.02□□□□□ -0.65
HSPG2-204ENST00000412328 PRSS3P2Q8NHM4 247 aa11.02□□□□□ -0.65
HSPG2-204ENST00000412328 MAP1LC3AQ9H492 121 aa11.02□□□□□ -0.65
HSPG2-204ENST00000412328 PYGO1Q9Y3Y4 419 aa11.02□□□□□ -0.65
HSPG2-204ENST00000412328 IGLV4-3A0A075B6K6 122 aa11.01□□□□□ -0.65
HSPG2-204ENST00000412328 Q8N8P6 123 aa11.01□□□□□ -0.65
HSPG2-204ENST00000412328 PLAC8Q9NZF1 115 aa11.01□□□□□ -0.65
HSPG2-204ENST00000412328 A0A087WYN8 130 aa11□□□□□ -0.65
HSPG2-204ENST00000412328 A0A096LNI7 61 aa11□□□□□ -0.65
HSPG2-204ENST00000412328 IGHV3OR16-9A0A0B4J2B5 98 aa11□□□□□ -0.65
HSPG2-204ENST00000412328 COX7A2LO14548 114 aa11□□□□□ -0.65
HSPG2-204ENST00000412328 HNRNPA3P51991 378 aaKnown RBP11□□□□□ -0.65
HSPG2-204ENST00000412328 LOC389332A0A1B0GUA5 103 aa10.99□□□□□ -0.65
HSPG2-204ENST00000412328 LINC00173Q6ZV60 143 aa10.99□□□□□ -0.65
HSPG2-204ENST00000412328 CARD19Q96LW7 228 aa10.99□□□□□ -0.65
HSPG2-204ENST00000412328 IGLV4-69A0A075B6H9 119 aa10.98□□□□□ -0.65
HSPG2-204ENST00000412328 IFITM10A6NMD0 228 aa10.97□□□□□ -0.65
HSPG2-204ENST00000412328 RAB5AP20339 215 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms