RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 TRAV9-1A0A075B6T8 112 aa20.38■□□□□ 0.85
TRAF3IP1-203ENST00000409739 TCAPO15273 167 aa20.37■□□□□ 0.85
TRAF3IP1-203ENST00000409739 CLRN3Q8NCR9 226 aa20.36■□□□□ 0.85
TRAF3IP1-203ENST00000409739 RHEBQ15382 184 aa20.35■□□□□ 0.85
TRAF3IP1-203ENST00000409739 KRTAP17-1Q9BYP8 105 aa20.35■□□□□ 0.85
TRAF3IP1-203ENST00000409739 CDC42SE2Q9NRR3 84 aa20.35■□□□□ 0.85
TRAF3IP1-203ENST00000409739 LAMTOR2Q9Y2Q5 125 aa20.35■□□□□ 0.85
TRAF3IP1-203ENST00000409739 UBE2D4Q9Y2X8 147 aa20.35■□□□□ 0.85
TRAF3IP1-203ENST00000409739 PRSS1P07477 247 aa20.34■□□□□ 0.85
TRAF3IP1-203ENST00000409739 GAGE12HA6NDE8 117 aa20.33■□□□□ 0.85
TRAF3IP1-203ENST00000409739 S100PP25815 95 aa20.33■□□□□ 0.85
TRAF3IP1-203ENST00000409739 XGP55808 180 aa20.33■□□□□ 0.85
TRAF3IP1-203ENST00000409739 ZNF664Q8N3J9 261 aa20.33■□□□□ 0.85
TRAF3IP1-203ENST00000409739 CHCHD10Q8WYQ3 142 aaPredicted RBP20.33■□□□□ 0.85
TRAF3IP1-203ENST00000409739 CSDC2Q9Y534 153 aaKnown RBP20.33■□□□□ 0.85
TRAF3IP1-203ENST00000409739 SMAGPQ0VAQ4 97 aa20.32■□□□□ 0.84
TRAF3IP1-203ENST00000409739 RPS10P5Q9NQ39 176 aa20.32■□□□□ 0.84
TRAF3IP1-203ENST00000409739 LINC01620Q4KN68 170 aa20.31■□□□□ 0.84
TRAF3IP1-203ENST00000409739 DGAT2L7PQ6IED9 249 aa20.31■□□□□ 0.84
TRAF3IP1-203ENST00000409739 TMEM18Q96B42 140 aa20.31■□□□□ 0.84
TRAF3IP1-203ENST00000409739 PRSS47A8MTI9 375 aa20.3■□□□□ 0.84
TRAF3IP1-203ENST00000409739 RPL39P62891 51 aaKnown RBP20.3■□□□□ 0.84
TRAF3IP1-203ENST00000409739 MAP1LC3AQ9H492 121 aa20.3■□□□□ 0.84
TRAF3IP1-203ENST00000409739 LINC00959A0A1B0GUT2 108 aa20.29■□□□□ 0.84
TRAF3IP1-203ENST00000409739 TIMM21Q9BVV7 248 aa20.29■□□□□ 0.84
TRAF3IP1-203ENST00000409739 FAM30AQ9NZY2 134 aa20.28■□□□□ 0.84
TRAF3IP1-203ENST00000409739 LOC389332A0A1B0GUA5 103 aa20.27■□□□□ 0.84
TRAF3IP1-203ENST00000409739 Q6ZUT4 128 aa20.27■□□□□ 0.84
TRAF3IP1-203ENST00000409739 APOC3P02656 99 aa20.26■□□□□ 0.83
TRAF3IP1-203ENST00000409739 RNASE13Q5GAN3 156 aaKnown RBP20.26■□□□□ 0.83
TRAF3IP1-203ENST00000409739 DNAH8Q96JB1 4490 aa20.25■□□□□ 0.83
TRAF3IP1-203ENST00000409739 RAB5AP20339 215 aa20.25■□□□□ 0.83
TRAF3IP1-203ENST00000409739 CCL25O15444 150 aa20.24■□□□□ 0.83
TRAF3IP1-203ENST00000409739 XCL1P47992 114 aa20.24■□□□□ 0.83
TRAF3IP1-203ENST00000409739 HAMPP81172 84 aa20.24■□□□□ 0.83
TRAF3IP1-203ENST00000409739 FOXI1Q12951 378 aa20.24■□□□□ 0.83
TRAF3IP1-203ENST00000409739 Q6ZSA8 131 aa20.24■□□□□ 0.83
TRAF3IP1-203ENST00000409739 C15orf56Q8N910 161 aa20.24■□□□□ 0.83
TRAF3IP1-203ENST00000409739 hDV102S1A0JD36 115 aa20.23■□□□□ 0.83
TRAF3IP1-203ENST00000409739 SS18Q15532 418 aa20.23■□□□□ 0.83
TRAF3IP1-203ENST00000409739 KIAA1644Q3SXP7 199 aa20.23■□□□□ 0.83
TRAF3IP1-203ENST00000409739 Q8N1X5 172 aa20.23■□□□□ 0.83
TRAF3IP1-203ENST00000409739 Q8N8P6 123 aa20.23■□□□□ 0.83
TRAF3IP1-203ENST00000409739 NDUFA5Q16718 116 aa20.22■□□□□ 0.83
TRAF3IP1-203ENST00000409739 GNB1LQ9BYB4 327 aa20.22■□□□□ 0.83
TRAF3IP1-203ENST00000409739 KRTAP4-5Q9BYR2 181 aa20.22■□□□□ 0.83
TRAF3IP1-203ENST00000409739 SPANXA1Q9NS26 97 aa20.22■□□□□ 0.83
TRAF3IP1-203ENST00000409739 SVBPQ8N300 66 aa20.21■□□□□ 0.83
TRAF3IP1-203ENST00000409739 FAM104AQ969W3 186 aa20.2■□□□□ 0.82
TRAF3IP1-203ENST00000409739 SNAPINO95295 136 aa20.19■□□□□ 0.82
TRAF3IP1-203ENST00000409739 CFAP161Q6P656 301 aa20.19■□□□□ 0.82
TRAF3IP1-203ENST00000409739 COX19Q49B96 90 aa20.18■□□□□ 0.82
TRAF3IP1-203ENST00000409739 CNBPP62633 177 aaKnown RBP20.17■□□□□ 0.82
TRAF3IP1-203ENST00000409739 CD164L2Q6UWJ8 174 aa20.17■□□□□ 0.82
TRAF3IP1-203ENST00000409739 TRAV13-1A0A0B4J241 112 aa20.16■□□□□ 0.82
TRAF3IP1-203ENST00000409739 MRPS36P82909 103 aaKnown RBP20.16■□□□□ 0.82
TRAF3IP1-203ENST00000409739 C9orf163Q8N9P6 203 aa20.16■□□□□ 0.82
TRAF3IP1-203ENST00000409739 OPRPNQ99935 248 aaPredicted RBP20.16■□□□□ 0.82
TRAF3IP1-203ENST00000409739 NXT2Q9NPJ8 142 aaKnown RBP20.16■□□□□ 0.82
TRAF3IP1-203ENST00000409739 AP5S1Q9NUS5 200 aa20.16■□□□□ 0.82
TRAF3IP1-203ENST00000409739 C1orf196B1AJZ1 125 aa20.15■□□□□ 0.82
TRAF3IP1-203ENST00000409739 HIGD2BQ4VC39 106 aa20.15■□□□□ 0.82
TRAF3IP1-203ENST00000409739 MT-ND6P03923 174 aa20.14■□□□□ 0.81
TRAF3IP1-203ENST00000409739 SLPIP03973 132 aa20.14■□□□□ 0.81
TRAF3IP1-203ENST00000409739 IFI27P40305 119 aaPredicted RBP20.14■□□□□ 0.81
TRAF3IP1-203ENST00000409739 GVQW2A0A096LPI5 108 aaPredicted RBP20.13■□□□□ 0.81
TRAF3IP1-203ENST00000409739 K7EMI3 77 aa20.13■□□□□ 0.81
TRAF3IP1-203ENST00000409739 TGIF2-C20orf24A0A0A6YYL0 155 aa20.12■□□□□ 0.81
TRAF3IP1-203ENST00000409739 ORMDL2Q53FV1 153 aa20.12■□□□□ 0.81
TRAF3IP1-203ENST00000409739 MRPL18Q9H0U6 180 aaKnown RBP20.12■□□□□ 0.81
TRAF3IP1-203ENST00000409739 PYGO1Q9Y3Y4 419 aa20.12■□□□□ 0.81
TRAF3IP1-203ENST00000409739 ALKBH7Q9BT30 221 aaPredicted RBP20.11■□□□□ 0.81
TRAF3IP1-203ENST00000409739 C2orf66Q6UXQ4 117 aa20.1■□□□□ 0.81
TRAF3IP1-203ENST00000409739 CYSLTR1Q9Y271 337 aa20.1■□□□□ 0.81
TRAF3IP1-203ENST00000409739 IGHV1-58A0A0C4DH39 117 aa20.09■□□□□ 0.81
TRAF3IP1-203ENST00000409739 SMR3BP02814 79 aaPredicted RBP20.09■□□□□ 0.81
TRAF3IP1-203ENST00000409739 IGLV4-3A0A075B6K6 122 aa20.08■□□□□ 0.81
TRAF3IP1-203ENST00000409739 TRAV16A0A0A6YYK6 109 aaPredicted RBP20.08■□□□□ 0.81
TRAF3IP1-203ENST00000409739 FAT1Q14517 4588 aa20.07■□□□□ 0.8
TRAF3IP1-203ENST00000409739 IFITM10A6NMD0 228 aa20.07■□□□□ 0.8
TRAF3IP1-203ENST00000409739 FABP9Q0Z7S8 132 aa20.07■□□□□ 0.8
TRAF3IP1-203ENST00000409739 SCXQ7RTU7 201 aa20.07■□□□□ 0.8
TRAF3IP1-203ENST00000409739 COX7A2LO14548 114 aa20.06■□□□□ 0.8
TRAF3IP1-203ENST00000409739 EPM2AB3EWF7 344 aa20.05■□□□□ 0.8
TRAF3IP1-203ENST00000409739 TMEM141Q96I45 108 aa20.05■□□□□ 0.8
TRAF3IP1-203ENST00000409739 CHAC1Q9BUX1 264 aa20.05■□□□□ 0.8
TRAF3IP1-203ENST00000409739 SDIM1Q6ZPB5 146 aa20.04■□□□□ 0.8
TRAF3IP1-203ENST00000409739 Q5VSD8 79 aa20.03■□□□□ 0.8
TRAF3IP1-203ENST00000409739 SLC7A5P1Q8MH63 180 aa20.03■□□□□ 0.8
TRAF3IP1-203ENST00000409739 PRSS3P2Q8NHM4 247 aa20.03■□□□□ 0.8
TRAF3IP1-203ENST00000409739 IGHV3-64A0A075B6Q5 118 aa20.02■□□□□ 0.8
TRAF3IP1-203ENST00000409739 LINC00526Q96FQ7 95 aa20.02■□□□□ 0.8
TRAF3IP1-203ENST00000409739 PCLOQ9Y6V0 5065 aa20.02■□□□□ 0.8
TRAF3IP1-203ENST00000409739 MALP21145 153 aa20.01■□□□□ 0.79
TRAF3IP1-203ENST00000409739 C5orf38Q86SI9 138 aa20.01■□□□□ 0.79
TRAF3IP1-203ENST00000409739 TRAPPC1Q9Y5R8 145 aa20.01■□□□□ 0.79
TRAF3IP1-203ENST00000409739 CIRBP-AS1Q8TBR5 109 aa20■□□□□ 0.79
TRAF3IP1-203ENST00000409739 YPEL4Q96NS1 127 aa20■□□□□ 0.79
TRAF3IP1-203ENST00000409739 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP20■□□□□ 0.79
TRAF3IP1-203ENST00000409739 ABCA13Q86UQ4 5058 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 297.8 ms