RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 ICOSQ9Y6W8 199 aa14.64□□□□□ -0.07
TPM1-208ENST00000404484 H3BNG1 76 aa14.64□□□□□ -0.07
TPM1-208ENST00000404484 DGAT2L7PQ6IED9 249 aa14.64□□□□□ -0.07
TPM1-208ENST00000404484 Q6ZTC4 211 aa14.64□□□□□ -0.07
TPM1-208ENST00000404484 MRPL52Q86TS9 123 aaKnown RBP14.64□□□□□ -0.07
TPM1-208ENST00000404484 CST9LQ9H4G1 147 aa14.64□□□□□ -0.07
TPM1-208ENST00000404484 MRPS36P82909 103 aaKnown RBP14.63□□□□□ -0.07
TPM1-208ENST00000404484 CSDC2Q9Y534 153 aaKnown RBP14.63□□□□□ -0.07
TPM1-208ENST00000404484 C3orf84H3BNL1 204 aa14.62□□□□□ -0.07
TPM1-208ENST00000404484 FGF6P10767 208 aa14.61□□□□□ -0.07
TPM1-208ENST00000404484 ZNF25P17030 456 aaPredicted RBP14.6□□□□□ -0.07
TPM1-208ENST00000404484 AMMECR1LQ6DCA0 310 aa14.6□□□□□ -0.07
TPM1-208ENST00000404484 TMEM101Q96IK0 257 aa14.6□□□□□ -0.07
TPM1-208ENST00000404484 AMELXQ99217 191 aa14.6□□□□□ -0.07
TPM1-208ENST00000404484 C2orf88Q9BSF0 95 aa14.6□□□□□ -0.07
TPM1-208ENST00000404484 PRO1933Q9H354 126 aa14.6□□□□□ -0.07
TPM1-208ENST00000404484 hDV102S1A0JD36 115 aa14.6□□□□□ -0.07
TPM1-208ENST00000404484 NANOS2P60321 138 aaKnown RBP14.6□□□□□ -0.07
TPM1-208ENST00000404484 MAJINQ3KP22 176 aa14.6□□□□□ -0.07
TPM1-208ENST00000404484 OPRPNQ99935 248 aaPredicted RBP14.6□□□□□ -0.07
TPM1-208ENST00000404484 CSMD3Q7Z407 3707 aa14.59□□□□□ -0.07
TPM1-208ENST00000404484 KMT2CQ8NEZ4 4911 aaKnown RBP14.59□□□□□ -0.07
TPM1-208ENST00000404484 PCP4L1A6NKN8 68 aa14.59□□□□□ -0.07
TPM1-208ENST00000404484 CEMP1Q6PRD7 247 aaPredicted RBP14.59□□□□□ -0.07
TPM1-208ENST00000404484 OR5A1Q8NGJ0 315 aa14.59□□□□□ -0.07
TPM1-208ENST00000404484 CHCHD5Q9BSY4 110 aa14.59□□□□□ -0.07
TPM1-208ENST00000404484 CASC10Q5T4H9 136 aa14.58□□□□□ -0.08
TPM1-208ENST00000404484 DEFB131BA0A096LNP1 70 aa14.57□□□□□ -0.08
TPM1-208ENST00000404484 Q6ZUT4 128 aa14.57□□□□□ -0.08
TPM1-208ENST00000404484 A0A096LPF7 62 aa14.56□□□□□ -0.08
TPM1-208ENST00000404484 ZC2HC1BQ5TFG8 222 aa14.56□□□□□ -0.08
TPM1-208ENST00000404484 ZFAND6Q6FIF0 208 aa14.56□□□□□ -0.08
TPM1-208ENST00000404484 STARD9Q9P2P6 4700 aa14.56□□□□□ -0.08
TPM1-208ENST00000404484 TRAV10A0A0B4J240 114 aa14.56□□□□□ -0.08
TPM1-208ENST00000404484 FAM104AQ969W3 186 aa14.56□□□□□ -0.08
TPM1-208ENST00000404484 IGLV4-69A0A075B6H9 119 aa14.55□□□□□ -0.08
TPM1-208ENST00000404484 GAGE6Q13070 117 aa14.55□□□□□ -0.08
TPM1-208ENST00000404484 IGLC3P0DOY3 106 aa14.54□□□□□ -0.08
TPM1-208ENST00000404484 NFE4Q86UQ8 179 aa14.54□□□□□ -0.08
TPM1-208ENST00000404484 TIRAPP58753 221 aa14.53□□□□□ -0.08
TPM1-208ENST00000404484 STPG4Q8N801 248 aa14.53□□□□□ -0.08
TPM1-208ENST00000404484 CDC42SE2Q9NRR3 84 aa14.53□□□□□ -0.08
TPM1-208ENST00000404484 UQCR10Q9UDW1 63 aa14.52□□□□□ -0.08
TPM1-208ENST00000404484 C11orf86A6NJI1 115 aa14.51□□□□□ -0.09
TPM1-208ENST00000404484 ANKRD39Q53RE8 183 aa14.51□□□□□ -0.09
TPM1-208ENST00000404484 LELP1Q5T871 98 aa14.51□□□□□ -0.09
TPM1-208ENST00000404484 MIEN1Q9BRT3 115 aa14.51□□□□□ -0.09
TPM1-208ENST00000404484 CHAC1Q9BUX1 264 aa14.51□□□□□ -0.09
TPM1-208ENST00000404484 TENM2Q9NT68 2774 aa14.51□□□□□ -0.09
TPM1-208ENST00000404484 HERVK_113P61574 105 aa14.51□□□□□ -0.09
TPM1-208ENST00000404484 RNASE13Q5GAN3 156 aaKnown RBP14.51□□□□□ -0.09
TPM1-208ENST00000404484 A0A1B0GUV1 79 aa14.5□□□□□ -0.09
TPM1-208ENST00000404484 DDTP30046 118 aa14.5□□□□□ -0.09
TPM1-208ENST00000404484 TINCRA0A1B0GVN0 87 aa14.49□□□□□ -0.09
TPM1-208ENST00000404484 TMEM262E9PQX1 116 aa14.49□□□□□ -0.09
TPM1-208ENST00000404484 UBE2D1P51668 147 aa14.49□□□□□ -0.09
TPM1-208ENST00000404484 SEC11AP67812 179 aa14.49□□□□□ -0.09
TPM1-208ENST00000404484 A0A0J9YXV3 536 aa14.48□□□□□ -0.09
TPM1-208ENST00000404484 C15orf53Q8NAA6 179 aa14.48□□□□□ -0.09
TPM1-208ENST00000404484 C14orf144Q96I85 54 aa14.48□□□□□ -0.09
TPM1-208ENST00000404484 COX8AP10176 69 aa14.47□□□□□ -0.09
TPM1-208ENST00000404484 TMEM170BQ5T4T1 132 aa14.47□□□□□ -0.09
TPM1-208ENST00000404484 SLC25A34Q6PIV7 304 aa14.47□□□□□ -0.09
TPM1-208ENST00000404484 LYPD5Q6UWN5 251 aa14.47□□□□□ -0.09
TPM1-208ENST00000404484 GEMIN7Q9H840 131 aaKnown RBP14.47□□□□□ -0.09
TPM1-208ENST00000404484 NMUP48645 174 aa14.46□□□□□ -0.09
TPM1-208ENST00000404484 TRAV8-6A0A0B4J262 113 aa14.45□□□□□ -0.1
TPM1-208ENST00000404484 E9PLD3 99 aa14.45□□□□□ -0.1
TPM1-208ENST00000404484 RBX1P62877 108 aa14.45□□□□□ -0.1
TPM1-208ENST00000404484 FAM19A3Q7Z5A8 133 aa14.45□□□□□ -0.1
TPM1-208ENST00000404484 IGLV4-60A0A075B6I1 120 aa14.44□□□□□ -0.1
TPM1-208ENST00000404484 ZNF22P17026 224 aaPredicted RBP14.44□□□□□ -0.1
TPM1-208ENST00000404484 HERVK_113P63121 156 aa14.44□□□□□ -0.1
TPM1-208ENST00000404484 MPV17L2Q567V2 206 aa14.43□□□□□ -0.1
TPM1-208ENST00000404484 TRAV13-1A0A0B4J241 112 aa14.43□□□□□ -0.1
TPM1-208ENST00000404484 DLEU1O43261 78 aa14.43□□□□□ -0.1
TPM1-208ENST00000404484 TCTAP57738 103 aa14.43□□□□□ -0.1
TPM1-208ENST00000404484 IGKV2D-26A0A0A0MRZ7 120 aa14.41□□□□□ -0.1
TPM1-208ENST00000404484 H3BRM9 83 aa14.41□□□□□ -0.1
TPM1-208ENST00000404484 HNRNPA3P51991 378 aaKnown RBP14.41□□□□□ -0.1
TPM1-208ENST00000404484 LINC00469Q8N7U9 141 aa14.41□□□□□ -0.1
TPM1-208ENST00000404484 DYNC2H1Q8NCM8 4307 aaKnown RBP14.41□□□□□ -0.1
TPM1-208ENST00000404484 IGLV5-45A0A087WSX0 123 aa14.4□□□□□ -0.1
TPM1-208ENST00000404484 TMEM223A0PJW6 202 aa14.4□□□□□ -0.1
TPM1-208ENST00000404484 LINC00242Q5T6M2 205 aa14.4□□□□□ -0.1
TPM1-208ENST00000404484 BOD1L2Q8IYS8 172 aa14.4□□□□□ -0.1
TPM1-208ENST00000404484 CCL25O15444 150 aa14.39□□□□□ -0.11
TPM1-208ENST00000404484 RYR3Q15413 4870 aa14.39□□□□□ -0.11
TPM1-208ENST00000404484 LINC00587B1AMM8 73 aa14.39□□□□□ -0.11
TPM1-208ENST00000404484 PLECQ15149 4684 aaKnown RBP14.38□□□□□ -0.11
TPM1-208ENST00000404484 PCP2Q8IVA1 136 aa14.38□□□□□ -0.11
TPM1-208ENST00000404484 SACSQ9NZJ4 4579 aa14.37□□□□□ -0.11
TPM1-208ENST00000404484 LYSTQ99698 3801 aa14.37□□□□□ -0.11
TPM1-208ENST00000404484 PLEKHB2Q96CS7 222 aa14.37□□□□□ -0.11
TPM1-208ENST00000404484 LEPROTO15243 131 aa14.36□□□□□ -0.11
TPM1-208ENST00000404484 ANGP03950 147 aaKnown RBP14.36□□□□□ -0.11
TPM1-208ENST00000404484 SS18Q15532 418 aa14.36□□□□□ -0.11
TPM1-208ENST00000404484 ESRGQ1W209 222 aa14.36□□□□□ -0.11
TPM1-208ENST00000404484 MRPS16Q9Y3D3 137 aaKnown RBP14.36□□□□□ -0.11
TPM1-208ENST00000404484 IGKV3OR2-268A0A0C4DH90 116 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms