RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 MRPL52Q86TS9 123 aaKnown RBP9.77□□□□□ -0.85
TPM1-207ENST00000403994 TMEM101Q96IK0 257 aa9.77□□□□□ -0.85
TPM1-207ENST00000403994 BTF3L4Q96K17 158 aa9.77□□□□□ -0.85
TPM1-207ENST00000403994 A0A087WYN8 130 aa9.76□□□□□ -0.85
TPM1-207ENST00000403994 C7orf77A4D0Y5 90 aa9.76□□□□□ -0.85
TPM1-207ENST00000403994 C9JQL5 133 aa9.76□□□□□ -0.85
TPM1-207ENST00000403994 RIGQ13278 110 aa9.76□□□□□ -0.85
TPM1-207ENST00000403994 ADIRFQ15847 76 aa9.76□□□□□ -0.85
TPM1-207ENST00000403994 TMEM241Q24JQ0 296 aa9.76□□□□□ -0.85
TPM1-207ENST00000403994 FAM74A3Q4VXF1 159 aa9.76□□□□□ -0.85
TPM1-207ENST00000403994 LINC00959A0A1B0GUT2 108 aa9.75□□□□□ -0.85
TPM1-207ENST00000403994 CCL25O15444 150 aa9.75□□□□□ -0.85
TPM1-207ENST00000403994 COX6A2Q02221 97 aa9.75□□□□□ -0.85
TPM1-207ENST00000403994 NRACQ8N912 160 aa9.75□□□□□ -0.85
TPM1-207ENST00000403994 NAT8BQ9UHF3 227 aa9.75□□□□□ -0.85
TPM1-207ENST00000403994 PLAC8Q9NZF1 115 aa9.74□□□□□ -0.85
TPM1-207ENST00000403994 NAT8Q9UHE5 227 aa9.74□□□□□ -0.85
TPM1-207ENST00000403994 SUMO2P61956 95 aaKnown RBP9.73□□□□□ -0.85
TPM1-207ENST00000403994 SRSF3P84103 164 aaKnown RBP9.73□□□□□ -0.85
TPM1-207ENST00000403994 CDC42SE2Q9NRR3 84 aa9.73□□□□□ -0.85
TPM1-207ENST00000403994 SMIM27A0A1W2PRY6 76 aa9.72□□□□□ -0.85
TPM1-207ENST00000403994 PPP1R17O96001 155 aa9.72□□□□□ -0.85
TPM1-207ENST00000403994 FCER1GP30273 86 aa9.72□□□□□ -0.85
TPM1-207ENST00000403994 ZNF664Q8N3J9 261 aa9.72□□□□□ -0.85
TPM1-207ENST00000403994 PRSS3P2Q8NHM4 247 aa9.72□□□□□ -0.85
TPM1-207ENST00000403994 IGHV1-58A0A0C4DH39 117 aa9.71□□□□□ -0.86
TPM1-207ENST00000403994 IGKV2-24A0A0C4DH68 120 aa9.71□□□□□ -0.86
TPM1-207ENST00000403994 VCYO14598 125 aa9.71□□□□□ -0.86
TPM1-207ENST00000403994 MRPL51Q4U2R6 128 aaKnown RBP9.71□□□□□ -0.86
TPM1-207ENST00000403994 FAM104BQ5XKR9 115 aa9.71□□□□□ -0.86
TPM1-207ENST00000403994 CD164L2Q6UWJ8 174 aa9.71□□□□□ -0.86
TPM1-207ENST00000403994 DPH3Q96FX2 82 aa9.71□□□□□ -0.86
TPM1-207ENST00000403994 A0A096LNI7 61 aa9.7□□□□□ -0.86
TPM1-207ENST00000403994 PPP1R2P9O14990 202 aa9.7□□□□□ -0.86
TPM1-207ENST00000403994 SS18Q15532 418 aa9.7□□□□□ -0.86
TPM1-207ENST00000403994 MAJINQ3KP22 176 aa9.7□□□□□ -0.86
TPM1-207ENST00000403994 LINC00526Q96FQ7 95 aa9.7□□□□□ -0.86
TPM1-207ENST00000403994 CARD19Q96LW7 228 aa9.7□□□□□ -0.86
TPM1-207ENST00000403994 KIR2DL4Q99706 377 aa9.7□□□□□ -0.86
TPM1-207ENST00000403994 UBE2D4Q9Y2X8 147 aa9.7□□□□□ -0.86
TPM1-207ENST00000403994 A0A1B0GW15 77 aa9.69□□□□□ -0.86
TPM1-207ENST00000403994 PHOX2AO14813 284 aa9.69□□□□□ -0.86
TPM1-207ENST00000403994 CAMPP49913 170 aa9.69□□□□□ -0.86
TPM1-207ENST00000403994 PEA15Q15121 130 aa9.69□□□□□ -0.86
TPM1-207ENST00000403994 RNASE13Q5GAN3 156 aaKnown RBP9.69□□□□□ -0.86
TPM1-207ENST00000403994 CSDC2Q9Y534 153 aaKnown RBP9.69□□□□□ -0.86
TPM1-207ENST00000403994 Q6ZUT4 128 aa9.68□□□□□ -0.86
TPM1-207ENST00000403994 C7orf33Q8WU49 177 aa9.68□□□□□ -0.86
TPM1-207ENST00000403994 SMDT1Q9H4I9 107 aa9.68□□□□□ -0.86
TPM1-207ENST00000403994 RPL32P62910 135 aaKnown RBP9.67□□□□□ -0.86
TPM1-207ENST00000403994 HBBP68871 147 aa9.67□□□□□ -0.86
TPM1-207ENST00000403994 SMAGPQ0VAQ4 97 aa9.67□□□□□ -0.86
TPM1-207ENST00000403994 SERTAD4-AS1Q5TG53 156 aa9.67□□□□□ -0.86
TPM1-207ENST00000403994 MRPL54Q6P161 138 aaKnown RBP9.67□□□□□ -0.86
TPM1-207ENST00000403994 STPG4Q8N801 248 aa9.67□□□□□ -0.86
TPM1-207ENST00000403994 C20orf78Q9BR46 151 aa9.67□□□□□ -0.86
TPM1-207ENST00000403994 TRBV24-1A0A075B6N3 115 aa9.66□□□□□ -0.86
TPM1-207ENST00000403994 A0A1B0GXF2 115 aa9.66□□□□□ -0.86
TPM1-207ENST00000403994 LINC00862A6NCI5 91 aa9.66□□□□□ -0.86
TPM1-207ENST00000403994 C1orf196B1AJZ1 125 aa9.66□□□□□ -0.86
TPM1-207ENST00000403994 CKS2P33552 79 aa9.66□□□□□ -0.86
TPM1-207ENST00000403994 Q6ZRU5 148 aa9.66□□□□□ -0.86
TPM1-207ENST00000403994 PKIGQ9Y2B9 76 aa9.66□□□□□ -0.86
TPM1-207ENST00000403994 TNXBP22105 4242 aa9.66□□□□□ -0.86
TPM1-207ENST00000403994 TRAV13-1A0A0B4J241 112 aa9.65□□□□□ -0.86
TPM1-207ENST00000403994 D6R8Y8 96 aa9.65□□□□□ -0.86
TPM1-207ENST00000403994 ZNF561-AS1K7EIQ3 104 aa9.65□□□□□ -0.86
TPM1-207ENST00000403994 COX7A2LO14548 114 aa9.65□□□□□ -0.86
TPM1-207ENST00000403994 MT1HL1P0DM35 61 aa9.65□□□□□ -0.86
TPM1-207ENST00000403994 PRR3P79522 188 aaKnown RBP9.65□□□□□ -0.86
TPM1-207ENST00000403994 SYCNQ0VAF6 134 aa9.65□□□□□ -0.86
TPM1-207ENST00000403994 TIMM21Q9BVV7 248 aa9.65□□□□□ -0.86
TPM1-207ENST00000403994 SMIM2Q9BVW6 85 aa9.65□□□□□ -0.86
TPM1-207ENST00000403994 TNFRSF6BO95407 300 aa9.64□□□□□ -0.87
TPM1-207ENST00000403994 S100A8P05109 93 aa9.64□□□□□ -0.87
TPM1-207ENST00000403994 RPL39P62891 51 aaKnown RBP9.64□□□□□ -0.87
TPM1-207ENST00000403994 LINC00474Q9P2X8 69 aa9.64□□□□□ -0.87
TPM1-207ENST00000403994 IGLV4-69A0A075B6H9 119 aa9.63□□□□□ -0.87
TPM1-207ENST00000403994 F8W036 122 aa9.63□□□□□ -0.87
TPM1-207ENST00000403994 TCAPO15273 167 aa9.63□□□□□ -0.87
TPM1-207ENST00000403994 NPYP01303 97 aa9.63□□□□□ -0.87
TPM1-207ENST00000403994 MALP21145 153 aa9.63□□□□□ -0.87
TPM1-207ENST00000403994 TMEM18Q96B42 140 aa9.63□□□□□ -0.87
TPM1-207ENST00000403994 PTTG1IPP53801 180 aa9.61□□□□□ -0.87
TPM1-207ENST00000403994 FAM104AQ969W3 186 aa9.61□□□□□ -0.87
TPM1-207ENST00000403994 SPANXA1Q9NS26 97 aa9.61□□□□□ -0.87
TPM1-207ENST00000403994 UBR4Q5T4S7 5183 aa9.61□□□□□ -0.87
TPM1-207ENST00000403994 PPBPP02775 128 aa9.6□□□□□ -0.87
TPM1-207ENST00000403994 ATP5L2Q7Z4Y8 100 aa9.6□□□□□ -0.87
TPM1-207ENST00000403994 C5orf38Q86SI9 138 aa9.6□□□□□ -0.87
TPM1-207ENST00000403994 PLA2G2DQ9UNK4 145 aa9.6□□□□□ -0.87
TPM1-207ENST00000403994 LOC107984640A0A0U1RRK4 108 aa9.59□□□□□ -0.87
TPM1-207ENST00000403994 SPAG11BQ08648 103 aa9.59□□□□□ -0.87
TPM1-207ENST00000403994 ORMDL3Q8N138 153 aa9.59□□□□□ -0.87
TPM1-207ENST00000403994 CAMK2N2Q96S95 79 aa9.59□□□□□ -0.87
TPM1-207ENST00000403994 APOMO95445 188 aa9.58□□□□□ -0.88
TPM1-207ENST00000403994 MRPS36P82909 103 aaKnown RBP9.58□□□□□ -0.88
TPM1-207ENST00000403994 C2orf48Q96LS8 159 aa9.58□□□□□ -0.88
TPM1-207ENST00000403994 OPRPNQ99935 248 aaPredicted RBP9.58□□□□□ -0.88
TPM1-207ENST00000403994 IFITM10A6NMD0 228 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 245 ms