RNA–Protein interactions for RNA: ENST00000402314.6

ATG3-202, Transcript of autophagy related 3, humanhuman

TSL 1 (best) BASIC

Gene ATG3, Length 3,010 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-202ENST00000402314 IGHV3-38A0A0C4DH36 116 aa10.31□□□□□ -0.76
ATG3-202ENST00000402314 NDUFA12Q9UI09 145 aa10.31□□□□□ -0.76
ATG3-202ENST00000402314 IGHV1OR15-1A0A075B7D0 117 aa10.31□□□□□ -0.76
ATG3-202ENST00000402314 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.31□□□□□ -0.76
ATG3-202ENST00000402314 TRBV27A0A0K0K1C4 114 aa10.31□□□□□ -0.76
ATG3-202ENST00000402314 I3L3M4 83 aa10.31□□□□□ -0.76
ATG3-202ENST00000402314 M0QY20 66 aa10.31□□□□□ -0.76
ATG3-202ENST00000402314 RPL13AP40429 203 aaKnown RBP10.31□□□□□ -0.76
ATG3-202ENST00000402314 DEFB131AP59861 70 aa10.31□□□□□ -0.76
ATG3-202ENST00000402314 TENM4Q6N022 2769 aa10.3□□□□□ -0.76
ATG3-202ENST00000402314 FAM236AA0A1B0GUQ0 79 aa10.3□□□□□ -0.76
ATG3-202ENST00000402314 FAM236BA0A1B0GV22 79 aa10.3□□□□□ -0.76
ATG3-202ENST00000402314 PPDPFQ9H3Y8 114 aa10.3□□□□□ -0.76
ATG3-202ENST00000402314 TRGV11A0A075B6L2 103 aa10.3□□□□□ -0.76
ATG3-202ENST00000402314 HIST2H2BCQ6DN03 193 aa10.3□□□□□ -0.76
ATG3-202ENST00000402314 Q6YL49 198 aa10.3□□□□□ -0.76
ATG3-202ENST00000402314 C9orf85Q96MD7 179 aa10.3□□□□□ -0.76
ATG3-202ENST00000402314 C20orf203Q8NBC4 194 aa10.29□□□□□ -0.76
ATG3-202ENST00000402314 NOTCH2Q04721 2471 aa10.29□□□□□ -0.76
ATG3-202ENST00000402314 KLK5Q9Y337 293 aaPredicted RBP10.29□□□□□ -0.76
ATG3-202ENST00000402314 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.28□□□□□ -0.76
ATG3-202ENST00000402314 IGKV2-29A2NJV5 120 aaPredicted RBP10.28□□□□□ -0.76
ATG3-202ENST00000402314 COX6CP09669 75 aa10.28□□□□□ -0.76
ATG3-202ENST00000402314 POM121L12Q8N7R1 296 aa10.28□□□□□ -0.76
ATG3-202ENST00000402314 Q96MF0 132 aa10.28□□□□□ -0.76
ATG3-202ENST00000402314 MRPL23Q16540 153 aaKnown RBP10.28□□□□□ -0.76
ATG3-202ENST00000402314 SETXQ7Z333 2677 aaKnown RBP10.27□□□□□ -0.77
ATG3-202ENST00000402314 TRBV30A0A0K0K1B3 111 aa10.27□□□□□ -0.77
ATG3-202ENST00000402314 RBMY1BA6NDE4 496 aaKnown RBP10.27□□□□□ -0.77
ATG3-202ENST00000402314 RBMY1EA6NEQ0 496 aaKnown RBP10.27□□□□□ -0.77
ATG3-202ENST00000402314 RBMY1DP0C7P1 496 aaKnown RBP10.27□□□□□ -0.77
ATG3-202ENST00000402314 TMEM61Q8N0U2 210 aa10.27□□□□□ -0.77
ATG3-202ENST00000402314 UBE2E2Q96LR5 201 aa10.27□□□□□ -0.77
ATG3-202ENST00000402314 LITAFQ99732 161 aa10.27□□□□□ -0.77
ATG3-202ENST00000402314 ZNF843Q8N446 348 aa10.27□□□□□ -0.77
ATG3-202ENST00000402314 FAM110AQ9BQ89 295 aa10.27□□□□□ -0.77
ATG3-202ENST00000402314 LOC107984640A0A0U1RRK4 108 aa10.26□□□□□ -0.77
ATG3-202ENST00000402314 J3QLI3 93 aa10.26□□□□□ -0.77
ATG3-202ENST00000402314 FSHBP01225 129 aa10.25□□□□□ -0.77
ATG3-202ENST00000402314 A0A1W2PRX2 142 aa10.25□□□□□ -0.77
ATG3-202ENST00000402314 HELZ2Q9BYK8 2649 aaKnown RBP10.24□□□□□ -0.77
ATG3-202ENST00000402314 DEFB113Q30KQ7 82 aa10.23□□□□□ -0.77
ATG3-202ENST00000402314 Q6ZSN1 163 aa10.23□□□□□ -0.77
ATG3-202ENST00000402314 TMEM89A2RUT3 159 aa10.23□□□□□ -0.77
ATG3-202ENST00000402314 LINC00694P0DN24 101 aa10.23□□□□□ -0.77
ATG3-202ENST00000402314 SMCR5Q8TEV8 140 aa10.23□□□□□ -0.77
ATG3-202ENST00000402314 FAM104AQ969W3 186 aa10.22□□□□□ -0.77
ATG3-202ENST00000402314 FN1P02751 2386 aaKnown RBP10.22□□□□□ -0.77
ATG3-202ENST00000402314 NDUFA7O95182 113 aa10.22□□□□□ -0.77
ATG3-202ENST00000402314 NSUN5P1Q3KNT7 163 aa10.22□□□□□ -0.77
ATG3-202ENST00000402314 Q8N2B8 174 aa10.22□□□□□ -0.77
ATG3-202ENST00000402314 CDKN2A-AS1Q9UH64 79 aa10.22□□□□□ -0.77
ATG3-202ENST00000402314 LST1O00453 97 aa10.21□□□□□ -0.77
ATG3-202ENST00000402314 IGHV1-58A0A0C4DH39 117 aa10.21□□□□□ -0.78
ATG3-202ENST00000402314 TRBV6-5A0A0K0K1A5 114 aa10.21□□□□□ -0.78
ATG3-202ENST00000402314 MIAQ16674 131 aa10.21□□□□□ -0.78
ATG3-202ENST00000402314 C9orf153Q5TBE3 101 aa10.21□□□□□ -0.78
ATG3-202ENST00000402314 WFDC11Q8NEX6 87 aa10.21□□□□□ -0.78
ATG3-202ENST00000402314 IGHV3OR16-12A0A075B7B8 117 aa10.2□□□□□ -0.78
ATG3-202ENST00000402314 Q6Q795 121 aa10.2□□□□□ -0.78
ATG3-202ENST00000402314 LINC01587Q99440 93 aa10.2□□□□□ -0.78
ATG3-202ENST00000402314 RHOHQ15669 191 aa10.2□□□□□ -0.78
ATG3-202ENST00000402314 Q9HAA7 133 aa10.2□□□□□ -0.78
ATG3-202ENST00000402314 TNFRSF18Q9Y5U5 241 aa10.2□□□□□ -0.78
ATG3-202ENST00000402314 VSIG2Q96IQ7 327 aa10.2□□□□□ -0.78
ATG3-202ENST00000402314 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.19□□□□□ -0.78
ATG3-202ENST00000402314 DYNLRB2Q8TF09 96 aa10.19□□□□□ -0.78
ATG3-202ENST00000402314 TMEM101Q96IK0 257 aa10.19□□□□□ -0.78
ATG3-202ENST00000402314 M0QXV9 152 aa10.19□□□□□ -0.78
ATG3-202ENST00000402314 CITED2Q99967 270 aaPredicted RBP10.19□□□□□ -0.78
ATG3-202ENST00000402314 XCL2Q9UBD3 114 aa10.19□□□□□ -0.78
ATG3-202ENST00000402314 H3BT86 120 aa10.18□□□□□ -0.78
ATG3-202ENST00000402314 KRTAP1-3Q8IUG1 177 aa10.18□□□□□ -0.78
ATG3-202ENST00000402314 MAP6D1Q9H9H5 199 aa10.18□□□□□ -0.78
ATG3-202ENST00000402314 LINC00467Q9BRT7 94 aa10.18□□□□□ -0.78
ATG3-202ENST00000402314 HIVEP2P31629 2446 aa10.18□□□□□ -0.78
ATG3-202ENST00000402314 GAGE2AQ6NT46 116 aa10.17□□□□□ -0.78
ATG3-202ENST00000402314 RNF152Q8N8N0 203 aa10.17□□□□□ -0.78
ATG3-202ENST00000402314 Q9H8V8 135 aa10.17□□□□□ -0.78
ATG3-202ENST00000402314 FASNP49327 2511 aaKnown RBP10.17□□□□□ -0.78
ATG3-202ENST00000402314 COX6A2Q02221 97 aa10.17□□□□□ -0.78
ATG3-202ENST00000402314 DAZ2Q13117 558 aaKnown RBP10.17□□□□□ -0.78
ATG3-202ENST00000402314 DAZ4Q86SG3 579 aaKnown RBP10.17□□□□□ -0.78
ATG3-202ENST00000402314 DAZ3Q9NR90 486 aaKnown RBP10.17□□□□□ -0.78
ATG3-202ENST00000402314 NBEAL2Q6ZNJ1 2754 aa10.17□□□□□ -0.78
ATG3-202ENST00000402314 MRPS36P82909 103 aaKnown RBP10.17□□□□□ -0.78
ATG3-202ENST00000402314 DGAT2L7PQ6IED9 249 aa10.16□□□□□ -0.78
ATG3-202ENST00000402314 TRAV13-1A0A0B4J241 112 aa10.16□□□□□ -0.78
ATG3-202ENST00000402314 HECTD1Q9ULT8 2610 aa10.15□□□□□ -0.78
ATG3-202ENST00000402314 DEFB114Q30KQ6 69 aa10.15□□□□□ -0.78
ATG3-202ENST00000402314 EDA2RQ9HAV5 297 aa10.15□□□□□ -0.78
ATG3-202ENST00000402314 PIK3CD-AS1Q5SR53 167 aa10.15□□□□□ -0.78
ATG3-202ENST00000402314 BAALC-AS2P0C853 105 aa10.14□□□□□ -0.79
ATG3-202ENST00000402314 ESM1Q9NQ30 184 aa10.14□□□□□ -0.79
ATG3-202ENST00000402314 C4orf3Q8WVX3 66 aa10.14□□□□□ -0.79
ATG3-202ENST00000402314 FAM218AQ96MZ4 157 aa10.14□□□□□ -0.79
ATG3-202ENST00000402314 PEMTQ9UBM1 199 aa10.14□□□□□ -0.79
ATG3-202ENST00000402314 PDZD2O15018 2839 aa10.14□□□□□ -0.79
ATG3-202ENST00000402314 IGKV3OR2-268A0A0C4DH90 116 aa10.13□□□□□ -0.79
ATG3-202ENST00000402314 HERVK_113P63121 156 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms